RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 RHPN1Q8TCX5 695 aa13.04□□□□□ -0.32
PNN-203ENST00000554117 ZNF384Q8TF68 577 aa13.04□□□□□ -0.32
PNN-203ENST00000554117 EAF2Q96CJ1 260 aaPredicted RBP13.04□□□□□ -0.32
PNN-203ENST00000554117 HTATIP2Q9BUP3 242 aa13.04□□□□□ -0.32
PNN-203ENST00000554117 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.325e-11■■■□□ 16
PNN-203ENST00000554117 RNF208Q9H0X6 261 aa13.04□□□□□ -0.32
PNN-203ENST00000554117 MAGEB6P1A0A0J9YX57 407 aa13.03□□□□□ -0.32
PNN-203ENST00000554117 ADCY3O60266 1144 aa13.03□□□□□ -0.32
PNN-203ENST00000554117 POLR3DP05423 398 aaPredicted RBP13.03□□□□□ -0.32
PNN-203ENST00000554117 PRKCZQ05513 592 aa13.03□□□□□ -0.32
PNN-203ENST00000554117 MOGSQ13724 837 aa13.03□□□□□ -0.32
PNN-203ENST00000554117 WDR18Q9BV38 432 aa13.03□□□□□ -0.32
PNN-203ENST00000554117 CRNKL1Q9BZJ0 848 aaKnown RBP13.03□□□□□ -0.32
PNN-203ENST00000554117 IL1RAPL2Q9NP60 686 aa13.03□□□□□ -0.32
PNN-203ENST00000554117 SAP30BPQ9UHR5 308 aaKnown RBP13.03□□□□□ -0.32
PNN-203ENST00000554117 SERPINB13Q9UIV8 391 aa13.03□□□□□ -0.32
PNN-203ENST00000554117 RCAN3Q9UKA8 241 aa13.03□□□□□ -0.32
PNN-203ENST00000554117 PALD1Q9ULE6 856 aa13.03□□□□□ -0.32
PNN-203ENST00000554117 SLC34A2O95436 690 aa13.02□□□□□ -0.33
PNN-203ENST00000554117 CCL5P13501 91 aa13.02□□□□□ -0.33
PNN-203ENST00000554117 USP14P54578 494 aa13.02□□□□□ -0.33
PNN-203ENST00000554117 BACE1P56817 501 aa13.02□□□□□ -0.33
PNN-203ENST00000554117 MTMR2Q13614 643 aa13.02□□□□□ -0.33
PNN-203ENST00000554117 PDE3AQ14432 1141 aa13.02□□□□□ -0.33
PNN-203ENST00000554117 SH3D19Q5HYK7 790 aa13.02□□□□□ -0.33
PNN-203ENST00000554117 MIGA1Q8NAN2 632 aa13.02□□□□□ -0.33
PNN-203ENST00000554117 PXYLP1Q8TE99 480 aa13.02□□□□□ -0.33
PNN-203ENST00000554117 GPATCH3Q96I76 525 aa13.02□□□□□ -0.33
PNN-203ENST00000554117 DNAJC2Q99543 621 aaKnown RBP13.02□□□□□ -0.33
PNN-203ENST00000554117 PIH1D3Q9NQM4 214 aaKnown RBP13.02□□□□□ -0.33
PNN-203ENST00000554117 TLR7Q9NYK1 1049 aaKnown RBP13.02□□□□□ -0.33
PNN-203ENST00000554117 COG6Q9Y2V7 657 aa13.02□□□□□ -0.33
PNN-203ENST00000554117 ALPK3Q96L96 1907 aa13.01□□□□□ -0.33
PNN-203ENST00000554117 GDF11O95390 407 aa13.01□□□□□ -0.33
PNN-203ENST00000554117 FLT3LGP49771 235 aa13.01□□□□□ -0.33
PNN-203ENST00000554117 DYNLL1P63167 89 aaKnown RBP13.01□□□□□ -0.33
PNN-203ENST00000554117 IRF5Q13568 498 aa13.01□□□□□ -0.33
PNN-203ENST00000554117 CERKLQ49MI3 558 aaPredicted RBP13.01□□□□□ -0.33
PNN-203ENST00000554117 TREML2Q5T2D2 321 aa13.01□□□□□ -0.33
PNN-203ENST00000554117 SLC9C2Q5TAH2 1124 aa13.01□□□□□ -0.33
PNN-203ENST00000554117 ZSCAN25Q6NSZ9 544 aa13.01□□□□□ -0.33
PNN-203ENST00000554117 USP17L2Q6R6M4 530 aa13.01□□□□□ -0.33
PNN-203ENST00000554117 CCDC84Q86UT8 332 aaPredicted RBP13.01□□□□□ -0.33
PNN-203ENST00000554117 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.01□□□□□ -0.33
PNN-203ENST00000554117 DPF3Q92784 378 aa13.01□□□□□ -0.33
PNN-203ENST00000554117 ASCC2Q9H1I8 757 aaPredicted RBP13.01□□□□□ -0.33
PNN-203ENST00000554117 ZBTB21Q9ULJ3 1066 aa13.01□□□□□ -0.33
PNN-203ENST00000554117 GLRX3O76003 335 aaKnown RBP13□□□□□ -0.33
PNN-203ENST00000554117 GJB1P08034 283 aa13□□□□□ -0.33
PNN-203ENST00000554117 CAP1Q01518 475 aa13□□□□□ -0.33
PNN-203ENST00000554117 RAB3GAP1Q15042 981 aa13□□□□□ -0.33
PNN-203ENST00000554117 ABCB5Q2M3G0 1257 aa13□□□□□ -0.33
PNN-203ENST00000554117 ADGRA1Q86SQ6 560 aa13□□□□□ -0.33
PNN-203ENST00000554117 EHD4Q9H223 541 aa13□□□□□ -0.33
PNN-203ENST00000554117 FRMD4AQ9P2Q2 1039 aaPredicted RBP13□□□□□ -0.33
PNN-203ENST00000554117 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
PNN-203ENST00000554117 GOLIM4O00461 696 aa12.99□□□□□ -0.33
PNN-203ENST00000554117 MPHOSPH10O00566 681 aaKnown RBP12.99□□□□□ -0.33
PNN-203ENST00000554117 TFRCP02786 760 aaKnown RBP12.99□□□□□ -0.33
PNN-203ENST00000554117 GJA8P48165 433 aa12.99□□□□□ -0.33
PNN-203ENST00000554117 CCNA1P78396 465 aa12.99□□□□□ -0.33
PNN-203ENST00000554117 MTFR1Q15390 333 aa12.99□□□□□ -0.33
PNN-203ENST00000554117 TRMT44Q8IYL2 757 aaKnown RBP12.99□□□□□ -0.33
PNN-203ENST00000554117 GPRC5AQ8NFJ5 357 aa12.99□□□□□ -0.33
PNN-203ENST00000554117 SOCS4Q8WXH5 440 aa12.99□□□□□ -0.33
PNN-203ENST00000554117 GABRQQ9UN88 632 aa12.99□□□□□ -0.33
PNN-203ENST00000554117 NR2E3Q9Y5X4 410 aa12.99□□□□□ -0.33
PNN-203ENST00000554117 HTTP42858 3142 aa12.99□□□□□ -0.33
PNN-203ENST00000554117 GH2P01242 217 aa12.98□□□□□ -0.33
PNN-203ENST00000554117 HMGCRP04035 888 aa12.98□□□□□ -0.33
PNN-203ENST00000554117 INHAP05111 366 aa12.98□□□□□ -0.33
PNN-203ENST00000554117 SLURP2P0DP57 97 aa12.98□□□□□ -0.33
PNN-203ENST00000554117 CTGFP29279 349 aa12.98□□□□□ -0.33
PNN-203ENST00000554117 MAPK4P31152 587 aa12.98□□□□□ -0.33
PNN-203ENST00000554117 HOXA7P31268 230 aaPredicted RBP12.98□□□□□ -0.33
PNN-203ENST00000554117 LRRFIP1Q32MZ4 808 aaKnown RBP12.98□□□□□ -0.33
PNN-203ENST00000554117 METTL16Q86W50 562 aaKnown RBP12.98□□□□□ -0.33
PNN-203ENST00000554117 NUDT12Q9BQG2 462 aa12.98□□□□□ -0.33
PNN-203ENST00000554117 LRRCC1Q9C099 1032 aa12.98□□□□□ -0.33
PNN-203ENST00000554117 SH2D4AQ9H788 454 aa12.98□□□□□ -0.33
PNN-203ENST00000554117 ZBTB40Q9NUA8 1239 aa12.98□□□□□ -0.33
PNN-203ENST00000554117 PAG1Q9NWQ8 432 aa12.98□□□□□ -0.33
PNN-203ENST00000554117 MCM9Q9NXL9 1143 aa12.98□□□□□ -0.33
PNN-203ENST00000554117 A0A0G2JMZ2 1700 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 ZNF532Q9HCE3 1301 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 USP17L15C9J2P7 530 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 USP17L13C9JLJ4 530 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 USP17L11C9JVI0 530 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 USP17L18D6R9N7 530 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 USP17L22D6RA61 530 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 USP17L17D6RBQ6 530 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 USP17L19D6RCP7 530 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 USP17L20D6RJB6 530 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 FARP2O94887 1054 aaPredicted RBP12.97□□□□□ -0.33
PNN-203ENST00000554117 SGPL1O95470 568 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 ELNP15502 786 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 PDE6AP16499 860 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 HERVK_113P62684 666 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 USP17L24Q0WX57 530 aa12.97□□□□□ -0.33
PNN-203ENST00000554117 ZYXQ15942 572 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms