RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 AACSQ86V21 672 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 MAPKAPK5Q8IW41 473 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 CRACR2BQ8N4Y2 399 aaPredicted RBP8.05□□□□□ -1.12
SLIRP-203ENST00000554074 RHPN1Q8TCX5 695 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 KIF1BPQ96EK5 621 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 EHD4Q9H223 541 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 DNAJC18Q9H819 358 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 ZBTB40Q9NUA8 1239 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.05□□□□□ -1.12
SLIRP-203ENST00000554074 TAOK2Q9UL54 1235 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 ALPK3Q96L96 1907 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 ZNFX1Q9P2E3 1918 aaKnown RBP8.05□□□□□ -1.12
SLIRP-203ENST00000554074 FRMPD3Q5JV73 1810 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 RLFQ13129 1914 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 TNPO2O14787 897 aaKnown RBP8.04□□□□□ -1.12
SLIRP-203ENST00000554074 RAB11FIP3O75154 756 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 GJA8P48165 433 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 BACE1P56817 501 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 TATDN1Q6P1N9 297 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 TTC6Q86TZ1 520 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 CLASRPQ8N2M8 674 aaKnown RBP8.04□□□□□ -1.12
SLIRP-203ENST00000554074 ANKRD13CQ8N6S4 541 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 MAGEB6Q8N7X4 407 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 GTF3C2Q8WUA4 911 aaPredicted RBP8.04□□□□□ -1.12
SLIRP-203ENST00000554074 COA7Q96BR5 231 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 TRIM34Q9BYJ4 488 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 ASCC2Q9H1I8 757 aaPredicted RBP8.04□□□□□ -1.12
SLIRP-203ENST00000554074 TMOD4Q9NZQ9 345 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 MORF4L1Q9UBU8 362 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 SERPINB13Q9UIV8 391 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 RCAN3Q9UKA8 241 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 PALD1Q9ULE6 856 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 ZBTB21Q9ULJ3 1066 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 GABRQQ9UN88 632 aa8.04□□□□□ -1.12
SLIRP-203ENST00000554074 USP17L10C9JJH3 530 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 ADCY3O60266 1144 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 CCL5P13501 91 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 USP5P45974 858 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 FLT3LGP49771 235 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 DYNLL1P63167 89 aaKnown RBP8.03□□□□□ -1.12
SLIRP-203ENST00000554074 MTMR2Q13614 643 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 PDE3AQ14432 1141 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 MTFR1Q15390 333 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 UBE2Q1Q7Z7E8 422 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 SIRT2Q8IXJ6 389 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 SHISA4Q96DD7 197 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 RIOK1Q9BRS2 568 aaKnown RBP8.03□□□□□ -1.12
SLIRP-203ENST00000554074 RNF208Q9H0X6 261 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 ANTXR1Q9H6X2 564 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 IL1RAPL2Q9NP60 686 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 TRIOBPQ9H2D6 2365 aa8.03□□□□□ -1.12
SLIRP-203ENST00000554074 COL11A1P12107 1806 aaPredicted RBP8.02□□□□□ -1.13
SLIRP-203ENST00000554074 MAGEB6P1A0A0J9YX57 407 aa8.02□□□□□ -1.13
SLIRP-203ENST00000554074 GDF11O95390 407 aa8.02□□□□□ -1.13
SLIRP-203ENST00000554074 MYCP01106 439 aaPredicted RBP8.02□□□□□ -1.13
SLIRP-203ENST00000554074 IFIT2P09913 472 aaKnown RBP8.02□□□□□ -1.13
SLIRP-203ENST00000554074 PDE6AP16499 860 aa8.02□□□□□ -1.13
SLIRP-203ENST00000554074 IRX3P78415 501 aaPredicted RBP8.02□□□□□ -1.13
SLIRP-203ENST00000554074 JAG1P78504 1218 aa8.02□□□□□ -1.13
SLIRP-203ENST00000554074 USP17L2Q6R6M4 530 aa8.02□□□□□ -1.13
SLIRP-203ENST00000554074 MIGA1Q8NAN2 632 aa8.02□□□□□ -1.13
SLIRP-203ENST00000554074 C12orf42Q96LP6 360 aa8.02□□□□□ -1.13
SLIRP-203ENST00000554074 BIN2Q9UBW5 565 aaPredicted RBP8.02□□□□□ -1.13
SLIRP-203ENST00000554074 SAP30BPQ9UHR5 308 aaKnown RBP8.02□□□□□ -1.13
SLIRP-203ENST00000554074 COG6Q9Y2V7 657 aa8.02□□□□□ -1.13
SLIRP-203ENST00000554074 NDUFB9Q9Y6M9 179 aa8.02□□□□□ -1.13
SLIRP-203ENST00000554074 U3KPZ7 1027 aaPredicted RBP8.02□□□□□ -1.13
SLIRP-203ENST00000554074 A0A0G2JMZ2 1700 aa8.02□□□□□ -1.13
SLIRP-203ENST00000554074 GREB1LQ9C091 1923 aaPredicted RBP8.01□□□□□ -1.13
SLIRP-203ENST00000554074 ZNF236Q9UL36 1845 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 TCRBV5S4A2TA0A5A2 114 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 ECM2O94769 699 aaPredicted RBP8.01□□□□□ -1.13
SLIRP-203ENST00000554074 SGPL1O95470 568 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 GH2P01242 217 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 INHAP05111 366 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 ATP5JP18859 108 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 USP14P54578 494 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 HERVK_113P62684 666 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 GABPAQ06546 454 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 CERKLQ49MI3 558 aaPredicted RBP8.01□□□□□ -1.13
SLIRP-203ENST00000554074 SLC9C2Q5TAH2 1124 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 U2AF1L4Q8WU68 220 aaKnown RBP8.01□□□□□ -1.13
SLIRP-203ENST00000554074 SOCS4Q8WXH5 440 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 CRNKL1Q9BZJ0 848 aaKnown RBP8.01□□□□□ -1.13
SLIRP-203ENST00000554074 KIAA1683Q9H0B3 1180 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 CRISPLD2Q9H0B8 497 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 UNC93B1Q9H1C4 597 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 PAK6Q9NQU5 681 aaPredicted RBP8.01□□□□□ -1.13
SLIRP-203ENST00000554074 EMILIN3Q9NT22 766 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 GJD2Q9UKL4 321 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 MYH4Q9Y623 1939 aa8.01□□□□□ -1.13
SLIRP-203ENST00000554074 PLXNA1Q9UIW2 1896 aa8□□□□□ -1.13
SLIRP-203ENST00000554074 GOLIM4O00461 696 aa8□□□□□ -1.13
SLIRP-203ENST00000554074 HMGCRP04035 888 aa8□□□□□ -1.13
SLIRP-203ENST00000554074 XRCC5P13010 732 aaKnown RBP8□□□□□ -1.13
SLIRP-203ENST00000554074 ELNP15502 786 aa8□□□□□ -1.13
SLIRP-203ENST00000554074 MAPK4P31152 587 aa8□□□□□ -1.13
SLIRP-203ENST00000554074 SHMT1P34896 483 aa8□□□□□ -1.13
SLIRP-203ENST00000554074 ABCB5Q2M3G0 1257 aa8□□□□□ -1.13
SLIRP-203ENST00000554074 SHROOM1Q2M3G4 852 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms