RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 CHURC1-FNTBB4DL54 471 aa8.04□□□□□ -1.12
FOXN3-206ENST00000554005 ITGB2P05107 769 aa8.04□□□□□ -1.12
FOXN3-206ENST00000554005 NFICP08651 508 aa8.04□□□□□ -1.12
FOXN3-206ENST00000554005 MAP4P27816 1152 aaKnown RBP8.04□□□□□ -1.12
FOXN3-206ENST00000554005 CAP2P40123 477 aa8.04□□□□□ -1.12
FOXN3-206ENST00000554005 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.04□□□□□ -1.12
FOXN3-206ENST00000554005 FAM13CQ8NE31 585 aa8.04□□□□□ -1.12
FOXN3-206ENST00000554005 DNAJC2Q99543 621 aaKnown RBP8.04□□□□□ -1.12
FOXN3-206ENST00000554005 YIPF2Q9BWQ6 316 aa8.04□□□□□ -1.12
FOXN3-206ENST00000554005 PCOLCE2Q9UKZ9 415 aa8.04□□□□□ -1.12
FOXN3-206ENST00000554005 UPK3BL1B0FP48 263 aa8.03□□□□□ -1.12
FOXN3-206ENST00000554005 UPK3BL2E5RIL1 263 aa8.03□□□□□ -1.12
FOXN3-206ENST00000554005 DYNC1LI2O43237 492 aaPredicted RBP8.03□□□□□ -1.12
FOXN3-206ENST00000554005 RXRBP28702 533 aa8.03□□□□□ -1.12
FOXN3-206ENST00000554005 GATA4P43694 442 aa8.03□□□□□ -1.12
FOXN3-206ENST00000554005 RBL2Q08999 1139 aa8.03□□□□□ -1.12
FOXN3-206ENST00000554005 PRAMEF13Q5VWM6 474 aa8.03□□□□□ -1.12
FOXN3-206ENST00000554005 SLC6A19Q695T7 634 aa8.03□□□□□ -1.12
FOXN3-206ENST00000554005 RUFY4Q6ZNE9 571 aa8.03□□□□□ -1.12
FOXN3-206ENST00000554005 ATG4CQ96DT6 458 aa8.03□□□□□ -1.12
FOXN3-206ENST00000554005 DPH2Q9BQC3 489 aaPredicted RBP8.03□□□□□ -1.12
FOXN3-206ENST00000554005 PRKAG3Q9UGI9 489 aa8.03□□□□□ -1.12
FOXN3-206ENST00000554005 SMAD7O15105 426 aaKnown RBP8.02□□□□□ -1.13
FOXN3-206ENST00000554005 DHX15O43143 795 aaKnown RBP8.02□□□□□ -1.13
FOXN3-206ENST00000554005 GDF11O95390 407 aa8.02□□□□□ -1.13
FOXN3-206ENST00000554005 CST3P01034 146 aaPredicted RBP8.02□□□□□ -1.13
FOXN3-206ENST00000554005 YARSP54577 528 aaKnown RBP8.02□□□□□ -1.13
FOXN3-206ENST00000554005 PLA2G4EQ3MJ16 856 aa8.02□□□□□ -1.13
FOXN3-206ENST00000554005 ARSHQ5FYA8 562 aa8.02□□□□□ -1.13
FOXN3-206ENST00000554005 CDCP2Q5VXM1 449 aa8.02□□□□□ -1.13
FOXN3-206ENST00000554005 ARMCX6Q7L4S7 300 aa8.02□□□□□ -1.13
FOXN3-206ENST00000554005 NLRC3Q7RTR2 1065 aa8.02□□□□□ -1.13
FOXN3-206ENST00000554005 SLFN12Q8IYM2 578 aa8.02□□□□□ -1.13
FOXN3-206ENST00000554005 TM9SF2Q99805 663 aa8.02□□□□□ -1.13
FOXN3-206ENST00000554005 HIRIP3Q9BW71 556 aaPredicted RBP8.02□□□□□ -1.13
FOXN3-206ENST00000554005 CNNM2Q9H8M5 875 aa8.02□□□□□ -1.13
FOXN3-206ENST00000554005 LGR6Q9HBX8 967 aa8.02□□□□□ -1.13
FOXN3-206ENST00000554005 FAM95CA0A1B0GW59 222 aa8.01□□□□□ -1.13
FOXN3-206ENST00000554005 NME1P15531 152 aaKnown RBP8.01□□□□□ -1.13
FOXN3-206ENST00000554005 MAP7Q14244 749 aa8.01□□□□□ -1.13
FOXN3-206ENST00000554005 SEZ6L2Q6UXD5 910 aa8.01□□□□□ -1.13
FOXN3-206ENST00000554005 ANKS3Q6ZW76 656 aa8.01□□□□□ -1.13
FOXN3-206ENST00000554005 TAB3Q8N5C8 712 aaPredicted RBP8.01□□□□□ -1.13
FOXN3-206ENST00000554005 FOXQ1Q9C009 403 aa8.01□□□□□ -1.13
FOXN3-206ENST00000554005 KCNF1Q9H3M0 494 aa8.01□□□□□ -1.13
FOXN3-206ENST00000554005 TNFRSF10CO14798 259 aa8□□□□□ -1.13
FOXN3-206ENST00000554005 LRIG2O94898 1065 aa8□□□□□ -1.13
FOXN3-206ENST00000554005 ACRP10323 421 aa8□□□□□ -1.13
FOXN3-206ENST00000554005 GUCY2CP25092 1073 aa8□□□□□ -1.13
FOXN3-206ENST00000554005 TNNI3KQ59H18 835 aa8□□□□□ -1.13
FOXN3-206ENST00000554005 BEND4Q6ZU67 534 aa8□□□□□ -1.13
FOXN3-206ENST00000554005 CKAP2LQ8IYA6 745 aa8□□□□□ -1.13
FOXN3-206ENST00000554005 TMEM151AQ8N4L1 468 aa8□□□□□ -1.13
FOXN3-206ENST00000554005 C19orf47Q8N9M1 422 aaKnown RBP8□□□□□ -1.13
FOXN3-206ENST00000554005 HNRNPLLQ8WVV9 542 aaKnown RBP8□□□□□ -1.13
FOXN3-206ENST00000554005 TP53INP1Q96A56 240 aa8□□□□□ -1.13
FOXN3-206ENST00000554005 PSMG3-AS1Q96PY0 264 aa8□□□□□ -1.13
FOXN3-206ENST00000554005 KLF4O43474 513 aa7.99□□□□□ -1.13
FOXN3-206ENST00000554005 RAG1P15918 1043 aa7.99□□□□□ -1.13
FOXN3-206ENST00000554005 POLR2BP30876 1174 aaKnown RBP7.99□□□□□ -1.13
FOXN3-206ENST00000554005 CASP7P55210 303 aa7.99□□□□□ -1.13
FOXN3-206ENST00000554005 CLEC10AQ8IUN9 316 aa7.99□□□□□ -1.13
FOXN3-206ENST00000554005 SLC9A7Q96T83 725 aa7.99□□□□□ -1.13
FOXN3-206ENST00000554005 TPSG1Q9NRR2 321 aa7.99□□□□□ -1.13
FOXN3-206ENST00000554005 C1GALT1Q9NS00 363 aa7.99□□□□□ -1.13
FOXN3-206ENST00000554005 CDK5R2Q13319 367 aa7.98□□□□□ -1.13
FOXN3-206ENST00000554005 NFKBIBQ15653 356 aa7.98□□□□□ -1.13
FOXN3-206ENST00000554005 ZYXQ15942 572 aaKnown RBP7.98□□□□□ -1.13
FOXN3-206ENST00000554005 INTS3Q68E01 1043 aaKnown RBP7.98□□□□□ -1.13
FOXN3-206ENST00000554005 PAOXQ6QHF9 649 aa7.98□□□□□ -1.13
FOXN3-206ENST00000554005 TTC6Q86TZ1 520 aa7.98□□□□□ -1.13
FOXN3-206ENST00000554005 PHACTR4Q8IZ21 702 aa7.98□□□□□ -1.13
FOXN3-206ENST00000554005 MFSD2AQ8NA29 543 aa7.98□□□□□ -1.13
FOXN3-206ENST00000554005 XAGE3Q8WTP9 111 aa7.98□□□□□ -1.13
FOXN3-206ENST00000554005 CYB5D2Q8WUJ1 264 aa7.98□□□□□ -1.13
FOXN3-206ENST00000554005 FAM83CQ9BQN1 747 aa7.98□□□□□ -1.13
FOXN3-206ENST00000554005 TNKS2Q9H2K2 1166 aa7.98□□□□□ -1.13
FOXN3-206ENST00000554005 A0A1W2PQH9 124 aa7.97□□□□□ -1.13
FOXN3-206ENST00000554005 RGS13O14921 159 aa7.97□□□□□ -1.13
FOXN3-206ENST00000554005 PPP2R5EQ16537 467 aa7.97□□□□□ -1.13
FOXN3-206ENST00000554005 NBPF6Q5VWK0 638 aa7.97□□□□□ -1.13
FOXN3-206ENST00000554005 PMFBP1Q8TBY8 1022 aa7.97□□□□□ -1.13
FOXN3-206ENST00000554005 NBPF4Q96M43 638 aa7.97□□□□□ -1.13
FOXN3-206ENST00000554005 KIF2CQ99661 725 aa7.97□□□□□ -1.13
FOXN3-206ENST00000554005 C7orf69Q9H7B7 122 aa7.97□□□□□ -1.13
FOXN3-206ENST00000554005 ACTR10Q9NZ32 417 aa7.97□□□□□ -1.13
FOXN3-206ENST00000554005 RAXQ9Y2V3 346 aa7.97□□□□□ -1.13
FOXN3-206ENST00000554005 HMX2A2RU54 273 aa7.96□□□□□ -1.14
FOXN3-206ENST00000554005 FAM86C2PA6NEL3 165 aa7.96□□□□□ -1.14
FOXN3-206ENST00000554005 UBOX5O94941 541 aa7.96□□□□□ -1.14
FOXN3-206ENST00000554005 SLITRK5O94991 958 aa7.96□□□□□ -1.14
FOXN3-206ENST00000554005 RAB33AQ14088 237 aa7.96□□□□□ -1.14
FOXN3-206ENST00000554005 SOGA3Q5TF21 947 aa7.96□□□□□ -1.14
FOXN3-206ENST00000554005 UNC5AQ6ZN44 842 aa7.96□□□□□ -1.14
FOXN3-206ENST00000554005 PRR23CQ6ZRP0 262 aa7.96□□□□□ -1.14
FOXN3-206ENST00000554005 BAHD1Q8TBE0 780 aaPredicted RBP7.96□□□□□ -1.14
FOXN3-206ENST00000554005 PPP1R13LQ8WUF5 828 aa7.96□□□□□ -1.14
FOXN3-206ENST00000554005 CCDC74BQ96LY2 380 aa7.96□□□□□ -1.14
FOXN3-206ENST00000554005 MIPEPQ99797 713 aa7.96□□□□□ -1.14
FOXN3-206ENST00000554005 LNPKQ9C0E8 428 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms