RNA–Protein interactions for RNA: ENST00000553936.5

GPHN-206, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 574 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-206ENST00000553936 PLEKHH3Q7Z736 793 aa8.17□□□□□ -1.1
GPHN-206ENST00000553936 CCDC84Q86UT8 332 aaPredicted RBP8.17□□□□□ -1.1
GPHN-206ENST00000553936 ANKRD44Q8N8A2 993 aa8.17□□□□□ -1.1
GPHN-206ENST00000553936 ARRDC4Q8NCT1 418 aa8.17□□□□□ -1.1
GPHN-206ENST00000553936 IL27Q8NEV9 243 aa8.17□□□□□ -1.1
GPHN-206ENST00000553936 KLHDC4Q8TBB5 520 aa8.17□□□□□ -1.1
GPHN-206ENST00000553936 EDC3Q96F86 508 aaKnown RBP8.17□□□□□ -1.1
GPHN-206ENST00000553936 TRIM34Q9BYJ4 488 aa8.17□□□□□ -1.1
GPHN-206ENST00000553936 PRDM5Q9NQX1 630 aaPredicted RBP8.17□□□□□ -1.1
GPHN-206ENST00000553936 GINM1Q9NU53 330 aa8.17□□□□□ -1.1
GPHN-206ENST00000553936 ZBTB47Q9UFB7 747 aaPredicted RBP8.17□□□□□ -1.1
GPHN-206ENST00000553936 DDX20Q9UHI6 824 aaKnown RBP8.17□□□□□ -1.1
GPHN-206ENST00000553936 IVNS1ABPQ9Y6Y0 642 aa8.17□□□□□ -1.1
GPHN-206ENST00000553936 RFX7Q2KHR2 1363 aa8.17□□□□□ -1.1
GPHN-206ENST00000553936 PTPRFP10586 1907 aa8.17□□□□□ -1.1
GPHN-206ENST00000553936 MROH7-TTC4A0A0A0MT08 1334 aa8.16□□□□□ -1.1
GPHN-206ENST00000553936 USP17L10C9JJH3 530 aa8.16□□□□□ -1.1
GPHN-206ENST00000553936 KBTBD13C9JR72 458 aa8.16□□□□□ -1.1
GPHN-206ENST00000553936 LOC285556D6RIA3 1793 aa8.16□□□□□ -1.1
GPHN-206ENST00000553936 CIAO1O76071 339 aa8.16□□□□□ -1.1
GPHN-206ENST00000553936 PLA2G5P39877 138 aa8.16□□□□□ -1.1
GPHN-206ENST00000553936 ATP2B2Q01814 1243 aa8.16□□□□□ -1.1
GPHN-206ENST00000553936 MAP2K5Q13163 448 aa8.16□□□□□ -1.1
GPHN-206ENST00000553936 PDS5AQ29RF7 1337 aaKnown RBP8.16□□□□□ -1.1
GPHN-206ENST00000553936 MORN1Q5T089 497 aa8.16□□□□□ -1.1
GPHN-206ENST00000553936 P2RX7Q99572 595 aaKnown RBP8.16□□□□□ -1.1
GPHN-206ENST00000553936 NOL10Q9BSC4 688 aaKnown RBP8.16□□□□□ -1.1
GPHN-206ENST00000553936 WDR18Q9BV38 432 aa8.16□□□□□ -1.1
GPHN-206ENST00000553936 DDX4Q9NQI0 724 aaKnown RBP8.16□□□□□ -1.1
GPHN-206ENST00000553936 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.16□□□□□ -1.1
GPHN-206ENST00000553936 HDAC5Q9UQL6 1122 aa8.16□□□□□ -1.1
GPHN-206ENST00000553936 ATP11BQ9Y2G3 1177 aa8.16□□□□□ -1.1
GPHN-206ENST00000553936 DOCK3Q8IZD9 2030 aa8.15□□□□□ -1.1
GPHN-206ENST00000553936 PTPRCP08575 1304 aa8.15□□□□□ -1.1
GPHN-206ENST00000553936 GPR75-ASB3A0A0A6YYF3 556 aa8.15□□□□□ -1.1
GPHN-206ENST00000553936 WDR78Q5VTH9 848 aa8.15□□□□□ -1.1
GPHN-206ENST00000553936 ATXN2LQ8WWM7 1075 aaKnown RBP8.15□□□□□ -1.1
GPHN-206ENST00000553936 USP6NLQ92738 828 aa8.15□□□□□ -1.1
GPHN-206ENST00000553936 RNPC3Q96LT9 517 aaKnown RBP8.15□□□□□ -1.1
GPHN-206ENST00000553936 PAGR1Q9BTK6 254 aa8.15□□□□□ -1.1
GPHN-206ENST00000553936 DHX36Q9H2U1 1008 aaKnown RBP8.15□□□□□ -1.1
GPHN-206ENST00000553936 PI4KBQ9UBF8 816 aa8.15□□□□□ -1.1
GPHN-206ENST00000553936 PHIPQ8WWQ0 1821 aa8.15□□□□□ -1.11
GPHN-206ENST00000553936 SLC15A5A6NIM6 579 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 FAM196BA6NMK8 535 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 IL15P40933 162 aaPredicted RBP8.14□□□□□ -1.11
GPHN-206ENST00000553936 PHKA1P46020 1223 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 CCL14Q16627 93 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 C9orf50Q5SZB4 431 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 CCDC102BQ68D86 513 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 ATF7IPQ6VMQ6 1270 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 SLC39A5Q6ZMH5 540 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 CRACR2BQ8N4Y2 399 aaPredicted RBP8.14□□□□□ -1.11
GPHN-206ENST00000553936 BADQ92934 168 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 GAS2L1Q99501 681 aaPredicted RBP8.14□□□□□ -1.11
GPHN-206ENST00000553936 PORCNQ9H237 461 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 TTYH1Q9H313 450 aaPredicted RBP8.14□□□□□ -1.11
GPHN-206ENST00000553936 TXNRD2Q9NNW7 524 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 SLC5A4Q9NY91 659 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 RBPJLQ9UBG7 517 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 RABGAP1Q9Y3P9 1069 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 MAST2Q6P0Q8 1798 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 VCANP13611 3396 aa8.14□□□□□ -1.11
GPHN-206ENST00000553936 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.13□□□□□ -1.11
GPHN-206ENST00000553936 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.13□□□□□ -1.11
GPHN-206ENST00000553936 BAG3O95817 575 aa8.13□□□□□ -1.11
GPHN-206ENST00000553936 SLURP2P0DP57 97 aa8.13□□□□□ -1.11
GPHN-206ENST00000553936 PLCG2P16885 1265 aa8.13□□□□□ -1.11
GPHN-206ENST00000553936 RHBDL3P58872 404 aa8.13□□□□□ -1.11
GPHN-206ENST00000553936 MECOMQ03112 1051 aa8.13□□□□□ -1.11
GPHN-206ENST00000553936 MVPQ14764 893 aaKnown RBP8.13□□□□□ -1.11
GPHN-206ENST00000553936 Q3C1V9 767 aa8.13□□□□□ -1.11
GPHN-206ENST00000553936 C1orf53Q5VUE5 145 aa8.13□□□□□ -1.11
GPHN-206ENST00000553936 USP17L2Q6R6M4 530 aa8.13□□□□□ -1.11
GPHN-206ENST00000553936 ATG9AQ7Z3C6 839 aa8.13□□□□□ -1.11
GPHN-206ENST00000553936 SP7Q8TDD2 431 aaPredicted RBP8.13□□□□□ -1.11
GPHN-206ENST00000553936 SIL1Q9H173 461 aa8.13□□□□□ -1.11
GPHN-206ENST00000553936 RTN4Q9NQC3 1192 aaKnown RBP8.13□□□□□ -1.11
GPHN-206ENST00000553936 AKAP2Q9Y2D5 859 aa8.13□□□□□ -1.11
GPHN-206ENST00000553936 TACC3Q9Y6A5 838 aa8.13□□□□□ -1.11
GPHN-206ENST00000553936 MYH2Q9UKX2 1941 aa8.13□□□□□ -1.11
GPHN-206ENST00000553936 PLXNB2O15031 1838 aa8.13□□□□□ -1.11
GPHN-206ENST00000553936 C19orf67A6NJJ6 358 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 USP17L15C9J2P7 530 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 USP17L13C9JLJ4 530 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 USP17L11C9JVI0 530 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 USP17L18D6R9N7 530 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 USP17L22D6RA61 530 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 USP17L17D6RBQ6 530 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 USP17L19D6RCP7 530 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 USP17L20D6RJB6 530 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 HLA-DOAP06340 250 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 HOXC6P09630 235 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 PTPREP23469 700 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 RFX5P48382 616 aaPredicted RBP8.12□□□□□ -1.11
GPHN-206ENST00000553936 USP14P54578 494 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 USP17L24Q0WX57 530 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 RASGRF1Q13972 1273 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 SNX17Q15036 470 aa8.12□□□□□ -1.11
GPHN-206ENST00000553936 TRIM60Q495X7 471 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms