RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 GREB1LQ9C091 1923 aaPredicted RBP20.61■□□□□ 0.89
PSEN1-206ENST00000553447 DDTLA6NHG4 134 aaPredicted RBP20.6■□□□□ 0.89
PSEN1-206ENST00000553447 MYO1BO43795 1136 aa20.6■□□□□ 0.89
PSEN1-206ENST00000553447 TSPY3P0CV98 308 aa20.6■□□□□ 0.89
PSEN1-206ENST00000553447 TSPY8P0CW00 308 aa20.6■□□□□ 0.89
PSEN1-206ENST00000553447 METAP2P50579 478 aaKnown RBP eCLIP20.6■□□□□ 0.89
PSEN1-206ENST00000553447 CCDC178Q5BJE1 867 aa20.6■□□□□ 0.89
PSEN1-206ENST00000553447 IFIT1BQ5T764 474 aaKnown RBP20.6■□□□□ 0.89
PSEN1-206ENST00000553447 FKBP1CQ5VVH2 108 aa20.6■□□□□ 0.89
PSEN1-206ENST00000553447 SYNE3Q6ZMZ3 975 aa20.6■□□□□ 0.89
PSEN1-206ENST00000553447 RAB11FIP4Q86YS3 637 aa20.6■□□□□ 0.89
PSEN1-206ENST00000553447 MICALL2Q8IY33 904 aa20.6■□□□□ 0.89
PSEN1-206ENST00000553447 NSUN7Q8NE18 718 aaKnown RBP20.6■□□□□ 0.89
PSEN1-206ENST00000553447 SMARCC2Q8TAQ2 1214 aa20.6■□□□□ 0.89
PSEN1-206ENST00000553447 TCP11L1Q9NUJ3 509 aa20.6■□□□□ 0.89
PSEN1-206ENST00000553447 TAOK2Q9UL54 1235 aa20.6■□□□□ 0.89
PSEN1-206ENST00000553447 WNT10BO00744 389 aa20.59■□□□□ 0.89
PSEN1-206ENST00000553447 DHX16O60231 1041 aaKnown RBP20.59■□□□□ 0.89
PSEN1-206ENST00000553447 NMT2O60551 498 aa20.59■□□□□ 0.89
PSEN1-206ENST00000553447 JAK2O60674 1132 aa20.59■□□□□ 0.89
PSEN1-206ENST00000553447 DTNBO60941 627 aa20.59■□□□□ 0.89
PSEN1-206ENST00000553447 CTDNEP1O95476 244 aa20.59■□□□□ 0.89
PSEN1-206ENST00000553447 RCAN1P53805 252 aa20.59■□□□□ 0.89
PSEN1-206ENST00000553447 MICU3Q86XE3 530 aa20.59■□□□□ 0.89
PSEN1-206ENST00000553447 ZSCAN29Q8IWY8 852 aaPredicted RBP20.59■□□□□ 0.89
PSEN1-206ENST00000553447 ZNF654Q8IZM8 581 aa20.59■□□□□ 0.89
PSEN1-206ENST00000553447 PI4KBQ9UBF8 816 aa20.59■□□□□ 0.89
PSEN1-206ENST00000553447 CNOT7Q9UIV1 285 aaKnown RBP20.59■□□□□ 0.89
PSEN1-206ENST00000553447 GOLGA8AA7E2F4 631 aa20.58■□□□□ 0.89
PSEN1-206ENST00000553447 TCP10L2B9ZVM9 353 aa20.58■□□□□ 0.89
PSEN1-206ENST00000553447 PKP1Q13835 747 aa20.58■□□□□ 0.89
PSEN1-206ENST00000553447 NBPF9Q3BBW0 867 aa20.58■□□□□ 0.89
PSEN1-206ENST00000553447 GPC2Q8N158 579 aa20.58■□□□□ 0.89
PSEN1-206ENST00000553447 NEDD1Q8NHV4 660 aa20.58■□□□□ 0.89
PSEN1-206ENST00000553447 FAM151AQ8WW52 585 aa20.58■□□□□ 0.89
PSEN1-206ENST00000553447 ANKS1AQ92625 1134 aa20.58■□□□□ 0.89
PSEN1-206ENST00000553447 MYL10Q9BUA6 226 aa20.58■□□□□ 0.89
PSEN1-206ENST00000553447 IL17RBQ9NRM6 502 aa20.58■□□□□ 0.89
PSEN1-206ENST00000553447 RNF181Q9P0P0 153 aa20.58■□□□□ 0.89
PSEN1-206ENST00000553447 CNTNAP1P78357 1384 aa20.58■□□□□ 0.88
PSEN1-206ENST00000553447 PLIN4Q96Q06 1357 aa20.58■□□□□ 0.88
PSEN1-206ENST00000553447 PTPDC1A2A3K4 754 aa20.57■□□□□ 0.88
PSEN1-206ENST00000553447 RXRAP19793 462 aa20.57■□□□□ 0.88
PSEN1-206ENST00000553447 SHMT1P34896 483 aa20.57■□□□□ 0.88
PSEN1-206ENST00000553447 RCSD1Q6JBY9 416 aa20.57■□□□□ 0.88
PSEN1-206ENST00000553447 DGKHQ86XP1 1220 aa20.57■□□□□ 0.88
PSEN1-206ENST00000553447 FOXP4Q8IVH2 680 aaPredicted RBP20.57■□□□□ 0.88
PSEN1-206ENST00000553447 CRACR2BQ8N4Y2 399 aaPredicted RBP20.57■□□□□ 0.88
PSEN1-206ENST00000553447 VEZTQ9HBM0 779 aa20.57■□□□□ 0.88
PSEN1-206ENST00000553447 ZDHHC9Q9Y397 364 aa20.57■□□□□ 0.88
PSEN1-206ENST00000553447 BRD1O95696 1058 aa20.56■□□□□ 0.88
PSEN1-206ENST00000553447 EGFRP00533 1210 aa20.56■□□□□ 0.88
PSEN1-206ENST00000553447 HMGN5P82970 282 aaKnown RBP20.56■□□□□ 0.88
PSEN1-206ENST00000553447 RBM26Q5T8P6 1007 aaKnown RBP20.56■□□□□ 0.88
PSEN1-206ENST00000553447 CATIPQ7Z7H3 387 aa20.56■□□□□ 0.88
PSEN1-206ENST00000553447 FAM83AQ86UY5 434 aa20.56■□□□□ 0.88
PSEN1-206ENST00000553447 METTL16Q86W50 562 aaKnown RBP20.56■□□□□ 0.88
PSEN1-206ENST00000553447 DNAJC18Q9H819 358 aa20.56■□□□□ 0.88
PSEN1-206ENST00000553447 MYH6P13533 1939 aa20.55■□□□□ 0.88
PSEN1-206ENST00000553447 H7C1D1 291 aa20.55■□□□□ 0.88
PSEN1-206ENST00000553447 CPLX1O14810 134 aa20.55■□□□□ 0.88
PSEN1-206ENST00000553447 DDAH1O94760 285 aa20.55■□□□□ 0.88
PSEN1-206ENST00000553447 AKR1B1P15121 316 aa20.55■□□□□ 0.88
PSEN1-206ENST00000553447 SYT1P21579 422 aa20.55■□□□□ 0.88
PSEN1-206ENST00000553447 CDC27P30260 824 aa20.55■□□□□ 0.88
PSEN1-206ENST00000553447 SAMD7Q7Z3H4 446 aa20.55■□□□□ 0.88
PSEN1-206ENST00000553447 CCDC144CPQ8IYA2 1237 aa20.55■□□□□ 0.88
PSEN1-206ENST00000553447 TNPO1Q92973 898 aaKnown RBP20.55■□□□□ 0.88
PSEN1-206ENST00000553447 DDX11Q96FC9 970 aa20.55■□□□□ 0.88
PSEN1-206ENST00000553447 TRIM34Q9BYJ4 488 aa20.55■□□□□ 0.88
PSEN1-206ENST00000553447 FAM217BQ9NTX9 383 aaPredicted RBP20.55■□□□□ 0.88
PSEN1-206ENST00000553447 GPRC5DQ9NZD1 345 aa20.55■□□□□ 0.88
PSEN1-206ENST00000553447 MYH4Q9Y623 1939 aa20.55■□□□□ 0.88
PSEN1-206ENST00000553447 WDR33Q9C0J8 1336 aaKnown RBP20.54■□□□□ 0.88
PSEN1-206ENST00000553447 STX6O43752 255 aa20.54■□□□□ 0.88
PSEN1-206ENST00000553447 CALM1P0DP23 149 aa20.54■□□□□ 0.88
PSEN1-206ENST00000553447 CALM2P0DP24 149 aa20.54■□□□□ 0.88
PSEN1-206ENST00000553447 CALM3P0DP25 149 aa20.54■□□□□ 0.88
PSEN1-206ENST00000553447 PDCP20941 246 aa20.54■□□□□ 0.88
PSEN1-206ENST00000553447 ADD1P35611 737 aaKnown RBP20.54■□□□□ 0.88
PSEN1-206ENST00000553447 GPR162Q16538 588 aa20.54■□□□□ 0.88
PSEN1-206ENST00000553447 RTN1Q16799 776 aa20.54■□□□□ 0.88
PSEN1-206ENST00000553447 KIF4BQ2VIQ3 1234 aa20.54■□□□□ 0.88
PSEN1-206ENST00000553447 TBC1D10BQ4KMP7 808 aaPredicted RBP20.54■□□□□ 0.88
PSEN1-206ENST00000553447 C9orf131Q5VYM1 1079 aa20.54■□□□□ 0.88
PSEN1-206ENST00000553447 CPLX2Q6PUV4 134 aaKnown RBP20.54■□□□□ 0.88
PSEN1-206ENST00000553447 NUP133Q8WUM0 1156 aa20.54■□□□□ 0.88
PSEN1-206ENST00000553447 GOLGB1Q14789 3259 aaKnown RBP20.53■□□□□ 0.88
PSEN1-206ENST00000553447 CDKL5O76039 1030 aa20.53■□□□□ 0.88
PSEN1-206ENST00000553447 SLURP2P0DP57 97 aa20.53■□□□□ 0.88
PSEN1-206ENST00000553447 PDIA4P13667 645 aaKnown RBP20.53■□□□□ 0.88
PSEN1-206ENST00000553447 NOVP48745 357 aa20.53■□□□□ 0.88
PSEN1-206ENST00000553447 TNNI2P48788 182 aa20.53■□□□□ 0.88
PSEN1-206ENST00000553447 TROAPQ12815 778 aa20.53■□□□□ 0.88
PSEN1-206ENST00000553447 LARP1BQ659C4 914 aaKnown RBP20.53■□□□□ 0.88
PSEN1-206ENST00000553447 TATDN1Q6P1N9 297 aa20.53■□□□□ 0.88
PSEN1-206ENST00000553447 FAM184AQ8NB25 1140 aa20.53■□□□□ 0.88
PSEN1-206ENST00000553447 FANCBQ8NB91 859 aa20.53■□□□□ 0.88
PSEN1-206ENST00000553447 CCDC17Q96LX7 622 aa20.53■□□□□ 0.88
PSEN1-206ENST00000553447 CSRNP1Q96S65 589 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms