RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 CYBAP13498 195 aa17.08■□□□□ 0.32
SNRPF-203ENST00000551316 ADCYAP1R1P41586 468 aa17.08■□□□□ 0.32
SNRPF-203ENST00000551316 HERVK_113P62684 666 aa17.08■□□□□ 0.32
SNRPF-203ENST00000551316 SHROOM1Q2M3G4 852 aaPredicted RBP17.08■□□□□ 0.32
SNRPF-203ENST00000551316 LRRC24Q50LG9 513 aa17.08■□□□□ 0.32
SNRPF-203ENST00000551316 NPLOC4Q8TAT6 608 aa17.08■□□□□ 0.32
SNRPF-203ENST00000551316 DNAAF4Q8WXU2 420 aa17.08■□□□□ 0.32
SNRPF-203ENST00000551316 SUGT1Q9Y2Z0 365 aa17.08■□□□□ 0.32
SNRPF-203ENST00000551316 CACNA1FO60840 1977 aa17.08■□□□□ 0.32
SNRPF-203ENST00000551316 C5orf42Q9H799 3197 aa17.07■□□□□ 0.32
SNRPF-203ENST00000551316 IGHA2P01877 340 aa17.07■□□□□ 0.32
SNRPF-203ENST00000551316 ERVK-9P63128 1117 aa17.07■□□□□ 0.32
SNRPF-203ENST00000551316 ERVK-24P63145 666 aa17.07■□□□□ 0.32
SNRPF-203ENST00000551316 FPGSQ05932 587 aa17.07■□□□□ 0.32
SNRPF-203ENST00000551316 MAP2K5Q13163 448 aa17.07■□□□□ 0.32
SNRPF-203ENST00000551316 C16orf59Q7L2K0 433 aa17.07■□□□□ 0.32
SNRPF-203ENST00000551316 PLEKHH3Q7Z736 793 aa17.07■□□□□ 0.32
SNRPF-203ENST00000551316 ZNF280CQ8ND82 737 aa17.07■□□□□ 0.32
SNRPF-203ENST00000551316 GPRC5AQ8NFJ5 357 aa17.07■□□□□ 0.32
SNRPF-203ENST00000551316 RUNDC1Q96C34 613 aa17.07■□□□□ 0.32
SNRPF-203ENST00000551316 CDK5RAP2Q96SN8 1893 aa17.07■□□□□ 0.32
SNRPF-203ENST00000551316 MAPK4P31152 587 aa17.06■□□□□ 0.32
SNRPF-203ENST00000551316 JAG1P78504 1218 aa17.06■□□□□ 0.32
SNRPF-203ENST00000551316 FLIIQ13045 1269 aa17.06■□□□□ 0.32
SNRPF-203ENST00000551316 SH3D19Q5HYK7 790 aa17.06■□□□□ 0.32
SNRPF-203ENST00000551316 ZSCAN29Q8IWY8 852 aaPredicted RBP17.06■□□□□ 0.32
SNRPF-203ENST00000551316 KAZALD1Q96I82 304 aa17.06■□□□□ 0.32
SNRPF-203ENST00000551316 PAGR1Q9BTK6 254 aa17.06■□□□□ 0.32
SNRPF-203ENST00000551316 IDI2Q9BXS1 227 aa17.06■□□□□ 0.32
SNRPF-203ENST00000551316 YBX2Q9Y2T7 364 aaKnown RBP17.06■□□□□ 0.32
SNRPF-203ENST00000551316 SPTBN4Q9H254 2564 aa17.06■□□□□ 0.32
SNRPF-203ENST00000551316 ZDBF2Q9HCK1 2354 aa17.05■□□□□ 0.32
SNRPF-203ENST00000551316 KIAA0355O15063 1070 aa17.05■□□□□ 0.32
SNRPF-203ENST00000551316 CNMDO75829 334 aa17.05■□□□□ 0.32
SNRPF-203ENST00000551316 MYCNP04198 464 aaPredicted RBP17.05■□□□□ 0.32
SNRPF-203ENST00000551316 CLTBP09497 229 aa17.05■□□□□ 0.32
SNRPF-203ENST00000551316 IRX3P78415 501 aaPredicted RBP17.05■□□□□ 0.32
SNRPF-203ENST00000551316 MTMR2Q13614 643 aa17.05■□□□□ 0.32
SNRPF-203ENST00000551316 RASIP1Q5U651 963 aa17.05■□□□□ 0.32
SNRPF-203ENST00000551316 ANKS1AQ92625 1134 aa17.05■□□□□ 0.32
SNRPF-203ENST00000551316 TSR2Q969E8 191 aaKnown RBP17.05■□□□□ 0.32
SNRPF-203ENST00000551316 PHOX2BQ99453 314 aa17.05■□□□□ 0.32
SNRPF-203ENST00000551316 NKX2-4Q9H2Z4 354 aa17.05■□□□□ 0.32
SNRPF-203ENST00000551316 F6X3S4 739 aa17.04■□□□□ 0.32
SNRPF-203ENST00000551316 SMIM22K7EJ46 135 aa17.04■□□□□ 0.32
SNRPF-203ENST00000551316 ENTPD3O75355 529 aa17.04■□□□□ 0.32
SNRPF-203ENST00000551316 PICALMQ13492 652 aa17.04■□□□□ 0.32
SNRPF-203ENST00000551316 CCDC129Q6ZRS4 1044 aa17.04■□□□□ 0.32
SNRPF-203ENST00000551316 KBTBD13C9JR72 458 aa17.03■□□□□ 0.32
SNRPF-203ENST00000551316 TLL1O43897 1013 aa17.03■□□□□ 0.32
SNRPF-203ENST00000551316 SLC4A2P04920 1241 aa17.03■□□□□ 0.32
SNRPF-203ENST00000551316 RAG1P15918 1043 aa17.03■□□□□ 0.32
SNRPF-203ENST00000551316 GNAI1P63096 354 aa17.03■□□□□ 0.32
SNRPF-203ENST00000551316 PABPC4Q13310 644 aaKnown RBP eCLIP17.03■□□□□ 0.321e-11■□□□□ 8.4
SNRPF-203ENST00000551316 CAVIN4Q5BKX8 364 aa17.03■□□□□ 0.32
SNRPF-203ENST00000551316 FAM47AQ5JRC9 791 aa17.03■□□□□ 0.32
SNRPF-203ENST00000551316 C1orf53Q5VUE5 145 aa17.03■□□□□ 0.32
SNRPF-203ENST00000551316 MFSD14CQ5VZR4 134 aa17.03■□□□□ 0.32
SNRPF-203ENST00000551316 MROH5Q6ZUA9 1318 aa17.02■□□□□ 0.32
SNRPF-203ENST00000551316 MSCO60682 206 aa17.02■□□□□ 0.32
SNRPF-203ENST00000551316 PQBP1O60828 265 aaKnown RBP17.02■□□□□ 0.32
SNRPF-203ENST00000551316 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.32
SNRPF-203ENST00000551316 LRRC41Q15345 812 aa17.02■□□□□ 0.32
SNRPF-203ENST00000551316 EDC3Q96F86 508 aaKnown RBP17.02■□□□□ 0.32
SNRPF-203ENST00000551316 DCHS1Q96JQ0 3298 aa17.02■□□□□ 0.31
SNRPF-203ENST00000551316 GAKO14976 1311 aa17.01■□□□□ 0.31
SNRPF-203ENST00000551316 MYO15AQ9UKN7 3530 aa17.01■□□□□ 0.31
SNRPF-203ENST00000551316 ERC2O15083 957 aa17.01■□□□□ 0.31
SNRPF-203ENST00000551316 FGFR2P21802 821 aa17.01■□□□□ 0.31
SNRPF-203ENST00000551316 HOXA7P31268 230 aaPredicted RBP17.01■□□□□ 0.31
SNRPF-203ENST00000551316 TMEM240Q5SV17 173 aa17.01■□□□□ 0.31
SNRPF-203ENST00000551316 BEND3Q5T5X7 828 aa17.01■□□□□ 0.31
SNRPF-203ENST00000551316 KRT40Q6A162 431 aa17.01■□□□□ 0.31
SNRPF-203ENST00000551316 KLHDC4Q8TBB5 520 aa17.01■□□□□ 0.31
SNRPF-203ENST00000551316 SUCLG2Q96I99 432 aa17.01■□□□□ 0.31
SNRPF-203ENST00000551316 FBXL18Q96ME1 805 aa17.01■□□□□ 0.31
SNRPF-203ENST00000551316 STK31Q9BXU1 1019 aa17.01■□□□□ 0.31
SNRPF-203ENST00000551316 TACC3Q9Y6A5 838 aa17.01■□□□□ 0.31
SNRPF-203ENST00000551316 METTL24Q5JXM2 366 aa17■□□□□ 0.31
SNRPF-203ENST00000551316 PI4K2BG5E9Z4 385 aa16.99■□□□□ 0.31
SNRPF-203ENST00000551316 RFXAPO00287 272 aa16.99■□□□□ 0.31
SNRPF-203ENST00000551316 PDE8BO95263 885 aa16.99■□□□□ 0.31
SNRPF-203ENST00000551316 FAAP100Q0VG06 881 aa16.99■□□□□ 0.31
SNRPF-203ENST00000551316 ARRDC4Q8NCT1 418 aa16.99■□□□□ 0.31
SNRPF-203ENST00000551316 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.99■□□□□ 0.31
SNRPF-203ENST00000551316 FOCADQ5VW36 1801 aa16.98■□□□□ 0.31
SNRPF-203ENST00000551316 USP17L5A8MUK1 530 aa16.98■□□□□ 0.31
SNRPF-203ENST00000551316 GRM8O00222 908 aa16.98■□□□□ 0.31
SNRPF-203ENST00000551316 HOXC6P09630 235 aa16.98■□□□□ 0.31
SNRPF-203ENST00000551316 ACRP10323 421 aa16.98■□□□□ 0.31
SNRPF-203ENST00000551316 PTPREP23469 700 aa16.98■□□□□ 0.31
SNRPF-203ENST00000551316 CAP2P40123 477 aa16.98■□□□□ 0.31
SNRPF-203ENST00000551316 GRB14Q14449 540 aa16.98■□□□□ 0.31
SNRPF-203ENST00000551316 SKIV2LQ15477 1246 aaKnown RBP16.98■□□□□ 0.31
SNRPF-203ENST00000551316 PRAMEF19Q5SWL8 479 aa16.98■□□□□ 0.31
SNRPF-203ENST00000551316 WDR66Q8TBY9 1149 aa16.98■□□□□ 0.31
SNRPF-203ENST00000551316 OSBPL5Q9H0X9 879 aaPredicted RBP16.98■□□□□ 0.31
SNRPF-203ENST00000551316 PHF24Q9UPV7 400 aa16.98■□□□□ 0.31
SNRPF-203ENST00000551316 PRR33A8MZF0 331 aa16.97■□□□□ 0.31
SNRPF-203ENST00000551316 MYOGP15173 224 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms