RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 SLURP2P0DP57 97 aa25.48■■□□□ 1.67
NEK3-202ENST00000550841 HSPA8P11142 646 aaKnown RBP25.48■■□□□ 1.67
NEK3-202ENST00000550841 SHMT1P34896 483 aa25.48■■□□□ 1.67
NEK3-202ENST00000550841 VGLL4Q14135 290 aa25.48■■□□□ 1.67
NEK3-202ENST00000550841 SCYL3Q8IZE3 742 aa25.48■■□□□ 1.67
NEK3-202ENST00000550841 ZKSCAN4Q969J2 545 aaPredicted RBP25.48■■□□□ 1.67
NEK3-202ENST00000550841 CABP5Q9NP86 173 aa25.48■■□□□ 1.67
NEK3-202ENST00000550841 PCP11498 1178 aaKnown RBP25.47■■□□□ 1.67
NEK3-202ENST00000550841 ZNF444Q8N0Y2 327 aaPredicted RBP25.47■■□□□ 1.67
NEK3-202ENST00000550841 LSG1Q9H089 658 aaKnown RBP25.47■■□□□ 1.67
NEK3-202ENST00000550841 SIPA1L1O43166 1804 aa25.47■■□□□ 1.67
NEK3-202ENST00000550841 ASNSP08243 561 aa25.46■■□□□ 1.67
NEK3-202ENST00000550841 EVX2Q03828 476 aa25.46■■□□□ 1.67
NEK3-202ENST00000550841 ERO1BQ86YB8 467 aa25.46■■□□□ 1.67
NEK3-202ENST00000550841 CLMNQ96JQ2 1002 aa25.46■■□□□ 1.67
NEK3-202ENST00000550841 RNF41Q9H4P4 317 aaPredicted RBP25.46■■□□□ 1.67
NEK3-202ENST00000550841 MAP2K2P36507 400 aa25.45■■□□□ 1.66
NEK3-202ENST00000550841 CTDSPL2Q05D32 466 aa25.45■■□□□ 1.66
NEK3-202ENST00000550841 ABCB5Q2M3G0 1257 aa25.45■■□□□ 1.66
NEK3-202ENST00000550841 STK11IPQ8N1F8 1099 aa25.45■■□□□ 1.66
NEK3-202ENST00000550841 TBC1D2Q9BYX2 928 aa25.45■■□□□ 1.66
NEK3-202ENST00000550841 ELP3Q9H9T3 547 aa25.45■■□□□ 1.66
NEK3-202ENST00000550841 SNCAIPQ9Y6H5 919 aa25.45■■□□□ 1.66
NEK3-202ENST00000550841 EPB41L2O43491 1005 aaKnown RBP25.44■■□□□ 1.66
NEK3-202ENST00000550841 NT5C2P49902 561 aa25.44■■□□□ 1.66
NEK3-202ENST00000550841 MFSD6Q6ZSS7 791 aa25.44■■□□□ 1.66
NEK3-202ENST00000550841 SLC44A5Q8NCS7 719 aa25.44■■□□□ 1.66
NEK3-202ENST00000550841 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.44■■□□□ 1.66
NEK3-202ENST00000550841 RBM8AQ9Y5S9 174 aaKnown RBP25.44■■□□□ 1.66
NEK3-202ENST00000550841 SMIM22K7EJ46 135 aa25.43■■□□□ 1.66
NEK3-202ENST00000550841 HAND2P61296 217 aa25.43■■□□□ 1.66
NEK3-202ENST00000550841 PPATQ06203 517 aa25.43■■□□□ 1.66
NEK3-202ENST00000550841 AKNAD1Q5T1N1 836 aa25.43■■□□□ 1.66
NEK3-202ENST00000550841 LAMB1P07942 1786 aa25.43■■□□□ 1.66
NEK3-202ENST00000550841 SPDYE5A6NIY4 337 aa25.42■■□□□ 1.66
NEK3-202ENST00000550841 GDF11O95390 407 aa25.42■■□□□ 1.66
NEK3-202ENST00000550841 FGRP09769 529 aa25.42■■□□□ 1.66
NEK3-202ENST00000550841 PTPRAP18433 802 aa25.42■■□□□ 1.66
NEK3-202ENST00000550841 RRP1BQ14684 758 aaKnown RBP25.42■■□□□ 1.66
NEK3-202ENST00000550841 RNF20Q5VTR2 975 aa25.42■■□□□ 1.66
NEK3-202ENST00000550841 STAG1Q8WVM7 1258 aa25.42■■□□□ 1.66
NEK3-202ENST00000550841 USP17L5A8MUK1 530 aa25.41■■□□□ 1.66
NEK3-202ENST00000550841 MPHOSPH10O00566 681 aaKnown RBP25.41■■□□□ 1.66
NEK3-202ENST00000550841 ORC4O43929 436 aa25.41■■□□□ 1.66
NEK3-202ENST00000550841 AOC2O75106 756 aa25.41■■□□□ 1.66
NEK3-202ENST00000550841 GH2P01242 217 aa25.41■■□□□ 1.66
NEK3-202ENST00000550841 SLC10A3P09131 477 aa25.41■■□□□ 1.66
NEK3-202ENST00000550841 ZBTB48P10074 688 aaPredicted RBP25.41■■□□□ 1.66
NEK3-202ENST00000550841 TMEM179Q6ZVK1 233 aa25.41■■□□□ 1.66
NEK3-202ENST00000550841 RASAL3Q86YV0 1011 aa25.41■■□□□ 1.66
NEK3-202ENST00000550841 OPTNQ96CV9 577 aa25.41■■□□□ 1.66
NEK3-202ENST00000550841 WNK4Q96J92 1243 aa25.41■■□□□ 1.66
NEK3-202ENST00000550841 AS3MTQ9HBK9 375 aa25.41■■□□□ 1.66
NEK3-202ENST00000550841 ZBTB21Q9ULJ3 1066 aa25.41■■□□□ 1.66
NEK3-202ENST00000550841 RASA1P20936 1047 aa25.4■■□□□ 1.66
NEK3-202ENST00000550841 SPRYD7Q5W111 196 aa25.4■■□□□ 1.66
NEK3-202ENST00000550841 TOMM22Q9NS69 142 aa25.4■■□□□ 1.66
NEK3-202ENST00000550841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.4■■□□□ 1.66
NEK3-202ENST00000550841 ZHX2Q9Y6X8 837 aa25.4■■□□□ 1.66
NEK3-202ENST00000550841 PRDM1O75626 825 aa25.39■■□□□ 1.66
NEK3-202ENST00000550841 NOGQ13253 232 aa25.39■■□□□ 1.66
NEK3-202ENST00000550841 PPIL2Q13356 520 aa25.39■■□□□ 1.66
NEK3-202ENST00000550841 NECTIN1Q15223 517 aa25.39■■□□□ 1.66
NEK3-202ENST00000550841 OTUD5Q96G74 571 aa25.39■■□□□ 1.66
NEK3-202ENST00000550841 CNNM2Q9H8M5 875 aa25.39■■□□□ 1.66
NEK3-202ENST00000550841 MYH8P13535 1937 aa25.39■■□□□ 1.65
NEK3-202ENST00000550841 OTOFQ9HC10 1997 aa25.38■■□□□ 1.65
NEK3-202ENST00000550841 CYP21A2P08686 494 aa25.38■■□□□ 1.65
NEK3-202ENST00000550841 AKR1B1P15121 316 aa25.38■■□□□ 1.65
NEK3-202ENST00000550841 TRDNQ13061 729 aa25.38■■□□□ 1.65
NEK3-202ENST00000550841 RAB3GAP1Q15042 981 aa25.38■■□□□ 1.65
NEK3-202ENST00000550841 KRT23Q9C075 422 aa25.38■■□□□ 1.65
NEK3-202ENST00000550841 DOCK1Q14185 1865 aa25.37■■□□□ 1.65
NEK3-202ENST00000550841 FAM155AB1AL88 458 aaPredicted RBP25.37■■□□□ 1.65
NEK3-202ENST00000550841 CXCL11O14625 94 aa25.37■■□□□ 1.65
NEK3-202ENST00000550841 RANBP6O60518 1105 aaKnown RBP25.37■■□□□ 1.65
NEK3-202ENST00000550841 TSPY3P0CV98 308 aa25.37■■□□□ 1.65
NEK3-202ENST00000550841 TSPY8P0CW00 308 aa25.37■■□□□ 1.65
NEK3-202ENST00000550841 TFAP4Q01664 338 aa25.37■■□□□ 1.65
NEK3-202ENST00000550841 RRP12Q5JTH9 1297 aaKnown RBP25.37■■□□□ 1.65
NEK3-202ENST00000550841 PPP4R3BQ5MIZ7 849 aa25.37■■□□□ 1.65
NEK3-202ENST00000550841 TBC1D10CQ8IV04 446 aa25.37■■□□□ 1.65
NEK3-202ENST00000550841 REM2Q8IYK8 340 aaPredicted RBP25.37■■□□□ 1.65
NEK3-202ENST00000550841 ESR2Q92731 530 aa25.37■■□□□ 1.65
NEK3-202ENST00000550841 WDR18Q9BV38 432 aa25.37■■□□□ 1.65
NEK3-202ENST00000550841 NBPF3Q9H094 633 aa25.37■■□□□ 1.65
NEK3-202ENST00000550841 KANSL2Q9H9L4 492 aa25.37■■□□□ 1.65
NEK3-202ENST00000550841 TSPY2A6NKD2 308 aa25.36■■□□□ 1.65
NEK3-202ENST00000550841 ZKSCAN1P17029 563 aaPredicted RBP25.36■■□□□ 1.65
NEK3-202ENST00000550841 GTF2A2P52657 109 aa25.36■■□□□ 1.65
NEK3-202ENST00000550841 INHBEP58166 350 aa25.36■■□□□ 1.65
NEK3-202ENST00000550841 JAG1P78504 1218 aa25.36■■□□□ 1.65
NEK3-202ENST00000550841 CREB3L3Q68CJ9 461 aa25.36■■□□□ 1.65
NEK3-202ENST00000550841 ZNF280CQ8ND82 737 aa25.36■■□□□ 1.65
NEK3-202ENST00000550841 NEDD1Q8NHV4 660 aa25.36■■□□□ 1.65
NEK3-202ENST00000550841 INCENPQ9NQS7 918 aa25.36■■□□□ 1.65
NEK3-202ENST00000550841 AFG3L2Q9Y4W6 797 aa25.36■■□□□ 1.65
NEK3-202ENST00000550841 SLC27A2O14975 620 aa25.35■■□□□ 1.65
NEK3-202ENST00000550841 CA12O43570 354 aa25.35■■□□□ 1.65
NEK3-202ENST00000550841 SEPT2Q15019 361 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms