RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 IFIH1Q9BYX4 1025 aaKnown RBP17.63■□□□□ 0.41
RBFOX1-212ENST00000550418 TRIM58Q8NG06 486 aa17.63■□□□□ 0.41
RBFOX1-212ENST00000550418 APPBP2Q92624 585 aa17.63■□□□□ 0.41
RBFOX1-212ENST00000550418 STAP2Q9UGK3 403 aa17.63■□□□□ 0.41
RBFOX1-212ENST00000550418 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.63■□□□□ 0.41
RBFOX1-212ENST00000550418 HOXB7P09629 217 aa17.63■□□□□ 0.41
RBFOX1-212ENST00000550418 CCDC38Q502W7 563 aa17.63■□□□□ 0.41
RBFOX1-212ENST00000550418 BEND3Q5T5X7 828 aa17.63■□□□□ 0.41
RBFOX1-212ENST00000550418 SV2BQ7L1I2 683 aa17.63■□□□□ 0.41
RBFOX1-212ENST00000550418 SLF2Q8IX21 1173 aa17.63■□□□□ 0.41
RBFOX1-212ENST00000550418 NFATC2IPQ8NCF5 419 aa17.63■□□□□ 0.41
RBFOX1-212ENST00000550418 LSG1Q9H089 658 aaKnown RBP17.63■□□□□ 0.41
RBFOX1-212ENST00000550418 ERVK-7P63135 1459 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 METP08581 1390 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 A0A1W2PQ27 194 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 A0A1W2PQ64 194 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 A0A1W2PQD8 194 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 E7EWF7 191 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 MYO1CO00159 1063 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 SLC8A1P32418 973 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 MAGEB6Q8N7X4 407 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 NELFBQ8WX92 580 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 DDX17Q92841 729 aaKnown RBP17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 HGSO14964 777 aaPredicted RBP17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 CNNM4Q6P4Q7 775 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 PARD6BQ9BYG5 372 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 USP44Q9H0E7 712 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 TAOK1Q7L7X3 1001 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 SEL1L2Q5TEA6 688 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 WDR66Q8TBY9 1149 aa17.62■□□□□ 0.41
RBFOX1-212ENST00000550418 EDC4Q6P2E9 1401 aaKnown RBP17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 GNA11P29992 359 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 PLCB3Q01970 1234 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 TTC38Q5R3I4 469 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 RPAINQ86UA6 219 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 CCDC84Q86UT8 332 aaPredicted RBP17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 STAMQ92783 540 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 FERMT2Q96AC1 680 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 VCXQ9H320 206 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 EHMT1Q9H9B1 1298 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 A0A0D9SFI3 127 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 ADCK5Q3MIX3 580 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 RIPOR2Q9Y4F9 1068 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 NDUFB9Q9Y6M9 179 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 PRDM15P57071 1507 aaPredicted RBP17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 KDM5DQ9BY66 1539 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 MAGEB6P1A0A0J9YX57 407 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 NEDD9Q14511 834 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 HS2ST1Q7LGA3 356 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 TRMT1LQ7Z2T5 733 aaKnown RBP17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 TRIML1Q8N9V2 468 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 MIGA1Q8NAN2 632 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 VEZTQ9HBM0 779 aa17.61■□□□□ 0.41
RBFOX1-212ENST00000550418 EYA2O00167 538 aa17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 GPAA1O43292 621 aa17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 GUCY2FP51841 1108 aa17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 SF3A3Q12874 501 aaKnown RBP eCLIP17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 RPS6KA1Q15418 735 aa17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 DSCC1Q9BVC3 393 aa17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 RNF40O75150 1001 aa17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 DPCR1Q3MIW9 517 aa17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 GKAP1Q5VSY0 366 aaPredicted RBP17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 TMEM87AQ8NBN3 555 aa17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 E2F4Q16254 413 aa17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 LRCH2Q5VUJ6 765 aa17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 CLEC17AQ6ZS10 378 aa17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 PIK3AP1Q6ZUJ8 805 aa17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 USP37Q86T82 979 aa17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 TACO1Q9BSH4 297 aaKnown RBP17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 V9GY48 417 aaPredicted RBP17.6■□□□□ 0.41
RBFOX1-212ENST00000550418 MBD4O95243 580 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 CTNNA1P35221 906 aaKnown RBP17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 ZNF827Q17R98 1081 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 ZFYVE16Q7Z3T8 1539 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 IKBKBO14920 756 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 ATP5JP18859 108 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 SLFNL1Q499Z3 407 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 NBPF14Q5TI25 921 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 UNC5CLQ8IV45 518 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 SLC35F6Q8N357 371 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 HYOU1Q9Y4L1 999 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 TCP1P17987 556 aaKnown RBP17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 RPL13P26373 211 aaKnown RBP17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 GJC1P36383 396 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 PPP4R3AQ6IN85 833 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 SUCLG2Q96I99 432 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 EEF2P13639 858 aaKnown RBP17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 DCAF17Q5H9S7 520 aaPredicted RBP17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 IP6K1Q92551 441 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 MYL10Q9BUA6 226 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 KCNJ14Q9UNX9 436 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 EPN1Q9Y6I3 576 aaPredicted RBP17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 MLH3Q9UHC1 1453 aa17.59■□□□□ 0.41
RBFOX1-212ENST00000550418 CCDC152Q4G0S7 254 aa17.58■□□□□ 0.41
RBFOX1-212ENST00000550418 TYW1BQ6NUM6 668 aa17.58■□□□□ 0.41
RBFOX1-212ENST00000550418 SREK1Q8WXA9 508 aaKnown RBP17.58■□□□□ 0.41
RBFOX1-212ENST00000550418 EDC3Q96F86 508 aaKnown RBP17.58■□□□□ 0.41
RBFOX1-212ENST00000550418 TRPM2O94759 1503 aa17.58■□□□□ 0.41
RBFOX1-212ENST00000550418 TNNI2P48788 182 aa17.58■□□□□ 0.4
RBFOX1-212ENST00000550418 SNCBQ16143 134 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms