RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 PAGR1Q9BTK6 254 aa8.6□□□□□ -1.03
LIN7A-202ENST00000549417 CWC22Q9HCG8 908 aaKnown RBP8.6□□□□□ -1.03
LIN7A-202ENST00000549417 CXXC1Q9P0U4 656 aaPredicted RBP8.6□□□□□ -1.03
LIN7A-202ENST00000549417 MORF4L1Q9UBU8 362 aa8.6□□□□□ -1.03
LIN7A-202ENST00000549417 FARP1Q9Y4F1 1045 aaPredicted RBP8.6□□□□□ -1.03
LIN7A-202ENST00000549417 CFAP54Q96N23 3096 aa8.59□□□□□ -1.03
LIN7A-202ENST00000549417 KBTBD13C9JR72 458 aa8.59□□□□□ -1.03
LIN7A-202ENST00000549417 MAPK4P31152 587 aa8.59□□□□□ -1.03
LIN7A-202ENST00000549417 ZEB1P37275 1124 aaPredicted RBP8.59□□□□□ -1.03
LIN7A-202ENST00000549417 ADCYAP1R1P41586 468 aa8.59□□□□□ -1.03
LIN7A-202ENST00000549417 TLE2Q04725 743 aa8.59□□□□□ -1.03
LIN7A-202ENST00000549417 PICALMQ13492 652 aa8.59□□□□□ -1.03
LIN7A-202ENST00000549417 SKIV2LQ15477 1246 aaKnown RBP8.59□□□□□ -1.03
LIN7A-202ENST00000549417 MFSD14CQ5VZR4 134 aa8.59□□□□□ -1.03
LIN7A-202ENST00000549417 GPR142Q7Z601 462 aa8.59□□□□□ -1.03
LIN7A-202ENST00000549417 ZNF280CQ8ND82 737 aa8.59□□□□□ -1.03
LIN7A-202ENST00000549417 STK31Q9BXU1 1019 aa8.59□□□□□ -1.03
LIN7A-202ENST00000549417 PBX4Q9BYU1 374 aa8.59□□□□□ -1.03
LIN7A-202ENST00000549417 TSPYL2Q9H2G4 693 aaPredicted RBP8.59□□□□□ -1.03
LIN7A-202ENST00000549417 CACNA1AO00555 2505 aa8.59□□□□□ -1.03
LIN7A-202ENST00000549417 MYH13Q9UKX3 1938 aa8.58□□□□□ -1.04
LIN7A-202ENST00000549417 CYP2C19P33261 490 aa8.58□□□□□ -1.04
LIN7A-202ENST00000549417 HERVK_113P62684 666 aa8.58□□□□□ -1.04
LIN7A-202ENST00000549417 FPGSQ05932 587 aa8.58□□□□□ -1.04
LIN7A-202ENST00000549417 WDR78Q5VTH9 848 aa8.58□□□□□ -1.04
LIN7A-202ENST00000549417 PLEKHH3Q7Z736 793 aa8.58□□□□□ -1.04
LIN7A-202ENST00000549417 LINS1Q8NG48 757 aa8.58□□□□□ -1.04
LIN7A-202ENST00000549417 DNAAF4Q8WXU2 420 aa8.58□□□□□ -1.04
LIN7A-202ENST00000549417 RUNDC1Q96C34 613 aa8.58□□□□□ -1.04
LIN7A-202ENST00000549417 UIMC1Q96RL1 719 aa8.58□□□□□ -1.04
LIN7A-202ENST00000549417 RBPJLQ9UBG7 517 aa8.58□□□□□ -1.04
LIN7A-202ENST00000549417 SUGT1Q9Y2Z0 365 aa8.58□□□□□ -1.04
LIN7A-202ENST00000549417 ATAD5Q96QE3 1844 aa8.58□□□□□ -1.04
LIN7A-202ENST00000549417 SMIM22K7EJ46 135 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 PQBP1O60828 265 aaKnown RBP8.57□□□□□ -1.04
LIN7A-202ENST00000549417 GPR37L1O60883 481 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 CLTBP09497 229 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 RAG1P15918 1043 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 PRDX5P30044 214 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 GNAI1P63096 354 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 ERVK-9P63128 1117 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 ERVK-24P63145 666 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 ATP2B2Q01814 1243 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 MAP2K5Q13163 448 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 FKBP5Q13451 457 aaPredicted RBP8.57□□□□□ -1.04
LIN7A-202ENST00000549417 MTMR2Q13614 643 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 SNX17Q15036 470 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 LRRC24Q50LG9 513 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 METTL24Q5JXM2 366 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 ARRDC4Q8NCT1 418 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 EDC3Q96F86 508 aaKnown RBP8.57□□□□□ -1.04
LIN7A-202ENST00000549417 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.57□□□□□ -1.04
LIN7A-202ENST00000549417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.57□□□□□ -1.04
LIN7A-202ENST00000549417 DDX4Q9NQI0 724 aaKnown RBP8.57□□□□□ -1.04
LIN7A-202ENST00000549417 IFT57Q9NWB7 429 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 TRANK1O15050 2925 aa8.57□□□□□ -1.04
LIN7A-202ENST00000549417 UTYO14607 1347 aa8.56□□□□□ -1.04
LIN7A-202ENST00000549417 GBF1Q92538 1859 aa8.56□□□□□ -1.04
LIN7A-202ENST00000549417 F6X3S4 739 aa8.56□□□□□ -1.04
LIN7A-202ENST00000549417 MSCO60682 206 aa8.56□□□□□ -1.04
LIN7A-202ENST00000549417 NHLH1Q02575 133 aa8.56□□□□□ -1.04
LIN7A-202ENST00000549417 MAP3K10Q02779 954 aa8.56□□□□□ -1.04
LIN7A-202ENST00000549417 FLIIQ13045 1269 aa8.56□□□□□ -1.04
LIN7A-202ENST00000549417 RRP1BQ14684 758 aaKnown RBP8.56□□□□□ -1.04
LIN7A-202ENST00000549417 NPLOC4Q8TAT6 608 aa8.56□□□□□ -1.04
LIN7A-202ENST00000549417 TSR2Q969E8 191 aaKnown RBP8.56□□□□□ -1.04
LIN7A-202ENST00000549417 NKX2-4Q9H2Z4 354 aa8.56□□□□□ -1.04
LIN7A-202ENST00000549417 TMEM39AQ9NV64 488 aa8.56□□□□□ -1.04
LIN7A-202ENST00000549417 TACC3Q9Y6A5 838 aa8.56□□□□□ -1.04
LIN7A-202ENST00000549417 LRRC37A2A6NM11 1700 aa8.56□□□□□ -1.04
LIN7A-202ENST00000549417 MYH2Q9UKX2 1941 aa8.56□□□□□ -1.04
LIN7A-202ENST00000549417 MROH5Q6ZUA9 1318 aa8.55□□□□□ -1.04
LIN7A-202ENST00000549417 ENTPD3O75355 529 aa8.55□□□□□ -1.04
LIN7A-202ENST00000549417 LDHBP07195 334 aaKnown RBP8.55□□□□□ -1.04
LIN7A-202ENST00000549417 CD44P16070 742 aaKnown RBP8.55□□□□□ -1.04
LIN7A-202ENST00000549417 AAK1Q2M2I8 961 aa8.55□□□□□ -1.04
LIN7A-202ENST00000549417 WDR66Q8TBY9 1149 aa8.55□□□□□ -1.04
LIN7A-202ENST00000549417 C5orf42Q9H799 3197 aa8.55□□□□□ -1.04
LIN7A-202ENST00000549417 USP17L5A8MUK1 530 aa8.54□□□□□ -1.04
LIN7A-202ENST00000549417 KIAA0355O15063 1070 aa8.54□□□□□ -1.04
LIN7A-202ENST00000549417 ACRP10323 421 aa8.54□□□□□ -1.04
LIN7A-202ENST00000549417 CYBAP13498 195 aa8.54□□□□□ -1.04
LIN7A-202ENST00000549417 LRRC41Q15345 812 aa8.54□□□□□ -1.04
LIN7A-202ENST00000549417 SH3D19Q5HYK7 790 aa8.54□□□□□ -1.04
LIN7A-202ENST00000549417 PRAMEF19Q5SWL8 479 aa8.54□□□□□ -1.04
LIN7A-202ENST00000549417 C16orf59Q7L2K0 433 aa8.54□□□□□ -1.04
LIN7A-202ENST00000549417 VGLL2Q8N8G2 317 aa8.54□□□□□ -1.04
LIN7A-202ENST00000549417 KLHDC4Q8TBB5 520 aa8.54□□□□□ -1.04
LIN7A-202ENST00000549417 IDI2Q9BXS1 227 aa8.54□□□□□ -1.04
LIN7A-202ENST00000549417 CD320Q9NPF0 282 aa8.54□□□□□ -1.04
LIN7A-202ENST00000549417 TMOD4Q9NZQ9 345 aa8.54□□□□□ -1.04
LIN7A-202ENST00000549417 MSRAQ9UJ68 235 aa8.54□□□□□ -1.04
LIN7A-202ENST00000549417 RFX7Q2KHR2 1363 aa8.53□□□□□ -1.04
LIN7A-202ENST00000549417 GRM8O00222 908 aa8.53□□□□□ -1.04
LIN7A-202ENST00000549417 ERC2O15083 957 aa8.53□□□□□ -1.04
LIN7A-202ENST00000549417 TLL1O43897 1013 aa8.53□□□□□ -1.04
LIN7A-202ENST00000549417 PDE8BO95263 885 aa8.53□□□□□ -1.04
LIN7A-202ENST00000549417 HOXA7P31268 230 aaPredicted RBP8.53□□□□□ -1.04
LIN7A-202ENST00000549417 WDR43Q15061 677 aaKnown RBP eCLIP8.53□□□□□ -1.04
LIN7A-202ENST00000549417 SHROOM1Q2M3G4 852 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms