RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 STK11IPQ8N1F8 1099 aa8.32□□□□□ -1.08
USP15-213ENST00000549268 MFSD2AQ8NA29 543 aa8.32□□□□□ -1.08
USP15-213ENST00000549268 NETO1Q8TDF5 533 aa8.32□□□□□ -1.08
USP15-213ENST00000549268 RHOVQ96L33 236 aa8.32□□□□□ -1.08
USP15-213ENST00000549268 FOXQ1Q9C009 403 aa8.32□□□□□ -1.08
USP15-213ENST00000549268 FBRSQ9HAH7 460 aa8.32□□□□□ -1.08
USP15-213ENST00000549268 GTF2IRD1Q9UHL9 959 aa8.32□□□□□ -1.08
USP15-213ENST00000549268 SUPT16HQ9Y5B9 1047 aaKnown RBP8.32□□□□□ -1.08
USP15-213ENST00000549268 FAM221AA4D161 298 aa8.31□□□□□ -1.08
USP15-213ENST00000549268 CILPO75339 1184 aa8.31□□□□□ -1.08
USP15-213ENST00000549268 BPNT1O95861 308 aa8.31□□□□□ -1.08
USP15-213ENST00000549268 FBXL19Q6PCT2 694 aa8.31□□□□□ -1.08
USP15-213ENST00000549268 KIAA0825Q8IV33 1275 aa8.31□□□□□ -1.08
USP15-213ENST00000549268 HEXIM2Q96MH2 286 aaKnown RBP8.31□□□□□ -1.08
USP15-213ENST00000549268 ACBD3Q9H3P7 528 aa8.31□□□□□ -1.08
USP15-213ENST00000549268 INPP5FQ9Y2H2 1132 aa8.31□□□□□ -1.08
USP15-213ENST00000549268 EOMESO95936 686 aa8.3□□□□□ -1.08
USP15-213ENST00000549268 GRK4P32298 578 aa8.3□□□□□ -1.08
USP15-213ENST00000549268 PDE4BQ07343 736 aa8.3□□□□□ -1.08
USP15-213ENST00000549268 GNL2Q13823 731 aaKnown RBP8.3□□□□□ -1.08
USP15-213ENST00000549268 IFI16Q16666 785 aaKnown RBP8.3□□□□□ -1.08
USP15-213ENST00000549268 BNC2Q6ZN30 1099 aaPredicted RBP8.3□□□□□ -1.08
USP15-213ENST00000549268 MRPL41Q8IXM3 137 aaKnown RBP8.3□□□□□ -1.08
USP15-213ENST00000549268 BCL7CQ8WUZ0 217 aaPredicted RBP8.3□□□□□ -1.08
USP15-213ENST00000549268 GATAD2BQ8WXI9 593 aa8.3□□□□□ -1.08
USP15-213ENST00000549268 CAPN10Q9HC96 672 aa8.3□□□□□ -1.08
USP15-213ENST00000549268 ADAMTS1Q9UHI8 967 aa8.3□□□□□ -1.08
USP15-213ENST00000549268 ADAM30Q9UKF2 790 aa8.3□□□□□ -1.08
USP15-213ENST00000549268 VAV3Q9UKW4 847 aa8.3□□□□□ -1.08
USP15-213ENST00000549268 TLR3O15455 904 aaKnown RBP8.29□□□□□ -1.08
USP15-213ENST00000549268 CST3P01034 146 aaPredicted RBP8.29□□□□□ -1.08
USP15-213ENST00000549268 RAD51AP2Q09MP3 1159 aa8.29□□□□□ -1.08
USP15-213ENST00000549268 NKG7Q16617 165 aa8.29□□□□□ -1.08
USP15-213ENST00000549268 TNKS2Q9H2K2 1166 aa8.29□□□□□ -1.08
USP15-213ENST00000549268 KCNQ5Q9NR82 932 aa8.29□□□□□ -1.08
USP15-213ENST00000549268 MAPK8IP1Q9UQF2 711 aa8.29□□□□□ -1.08
USP15-213ENST00000549268 SLC5A6Q9Y289 635 aa8.29□□□□□ -1.08
USP15-213ENST00000549268 SNX11Q9Y5W9 270 aa8.29□□□□□ -1.08
USP15-213ENST00000549268 TMEM265A0A087WTH1 108 aa8.28□□□□□ -1.08
USP15-213ENST00000549268 SLITRK5O94991 958 aa8.28□□□□□ -1.08
USP15-213ENST00000549268 F13A1P00488 732 aa8.28□□□□□ -1.08
USP15-213ENST00000549268 CEACAM5P06731 702 aa8.28□□□□□ -1.08
USP15-213ENST00000549268 PRKCQQ04759 706 aa8.28□□□□□ -1.08
USP15-213ENST00000549268 PAK2Q13177 524 aa8.28□□□□□ -1.08
USP15-213ENST00000549268 SLC6A19Q695T7 634 aa8.28□□□□□ -1.08
USP15-213ENST00000549268 PLD6Q8N2A8 252 aaKnown RBP8.28□□□□□ -1.08
USP15-213ENST00000549268 FAM181AQ8N9Y4 354 aa8.28□□□□□ -1.08
USP15-213ENST00000549268 AGBL5Q8NDL9 886 aa8.28□□□□□ -1.08
USP15-213ENST00000549268 U3KQE9 123 aa8.28□□□□□ -1.08
USP15-213ENST00000549268 PRR36Q9H6K5 1346 aa8.28□□□□□ -1.08
USP15-213ENST00000549268 COL17A1Q9UMD9 1497 aaPredicted RBP8.27□□□□□ -1.09
USP15-213ENST00000549268 TNNI2P48788 182 aa8.27□□□□□ -1.09
USP15-213ENST00000549268 ZC3H6P61129 1189 aaKnown RBP8.27□□□□□ -1.09
USP15-213ENST00000549268 C22orf34Q6ZV56 151 aa8.27□□□□□ -1.09
USP15-213ENST00000549268 VPS37DQ86XT2 251 aa8.27□□□□□ -1.09
USP15-213ENST00000549268 MCATQ8IVS2 390 aaKnown RBP8.27□□□□□ -1.09
USP15-213ENST00000549268 KRTAP4-8Q9BYQ9 185 aa8.27□□□□□ -1.09
USP15-213ENST00000549268 PAK6Q9NQU5 681 aaPredicted RBP8.27□□□□□ -1.09
USP15-213ENST00000549268 PRDM5Q9NQX1 630 aaPredicted RBP8.27□□□□□ -1.09
USP15-213ENST00000549268 PLAGL2Q9UPG8 496 aa8.27□□□□□ -1.09
USP15-213ENST00000549268 ROBO2Q9HCK4 1378 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 PGRP06401 933 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 GARTP22102 1010 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 MCM4P33991 863 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 APOBRQ0VD83 1088 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 CWF19L2Q2TBE0 894 aaKnown RBP8.26□□□□□ -1.09
USP15-213ENST00000549268 TMEM201Q5SNT2 666 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 PRAMEF13Q5VWM6 474 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 ZNF746Q6NUN9 644 aaPredicted RBP8.26□□□□□ -1.09
USP15-213ENST00000549268 FAM196AQ6ZSG2 479 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 ARHGAP27Q6ZUM4 889 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 WFDC3Q8IUB2 231 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 FLCNQ8NFG4 579 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 NKD1Q969G9 470 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 COX4I2Q96KJ9 171 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 UBP1Q9NZI7 540 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 TJP2Q9UDY2 1190 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 ADGRE2Q9UHX3 823 aa8.26□□□□□ -1.09
USP15-213ENST00000549268 GREM1O60565 184 aa8.25□□□□□ -1.09
USP15-213ENST00000549268 IRAK1P51617 712 aa8.25□□□□□ -1.09
USP15-213ENST00000549268 MPP2Q14168 576 aa8.25□□□□□ -1.09
USP15-213ENST00000549268 SEZ6Q53EL9 994 aa8.25□□□□□ -1.09
USP15-213ENST00000549268 ABI1Q8IZP0 508 aa8.25□□□□□ -1.09
USP15-213ENST00000549268 FBXO27Q8NI29 283 aa8.25□□□□□ -1.09
USP15-213ENST00000549268 EAF1Q96JC9 268 aaPredicted RBP8.25□□□□□ -1.09
USP15-213ENST00000549268 TMEM87BQ96K49 555 aa8.25□□□□□ -1.09
USP15-213ENST00000549268 NT5C1AQ9BXI3 368 aa8.25□□□□□ -1.09
USP15-213ENST00000549268 ZNF865P0CJ78 1059 aaPredicted RBP8.24□□□□□ -1.09
USP15-213ENST00000549268 NAALADL2Q58DX5 795 aa8.24□□□□□ -1.09
USP15-213ENST00000549268 LETMD1Q6P1Q0 360 aa8.24□□□□□ -1.09
USP15-213ENST00000549268 TP53INP2Q8IXH6 220 aa8.24□□□□□ -1.09
USP15-213ENST00000549268 ACSF2Q96CM8 615 aaPredicted RBP8.24□□□□□ -1.09
USP15-213ENST00000549268 GPRASP2Q96D09 838 aa8.24□□□□□ -1.09
USP15-213ENST00000549268 HRASLS5Q96KN8 279 aa8.24□□□□□ -1.09
USP15-213ENST00000549268 MIPEPQ99797 713 aa8.24□□□□□ -1.09
USP15-213ENST00000549268 LRRC3Q9BY71 257 aa8.24□□□□□ -1.09
USP15-213ENST00000549268 GNAT3A8MTJ3 354 aa8.23□□□□□ -1.09
USP15-213ENST00000549268 CLCN7P51798 805 aa8.23□□□□□ -1.09
USP15-213ENST00000549268 NKPD1Q17RQ9 610 aa8.23□□□□□ -1.09
USP15-213ENST00000549268 MCTP1Q6DN14 999 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms