RNA–Protein interactions for RNA: ENST00000548796.1

PACS2-208, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 5

Gene PACS2, Length 1,621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-208ENST00000548796 ZNF444Q8N0Y2 327 aaPredicted RBP23.11■■□□□ 1.29
PACS2-208ENST00000548796 RNF26Q9BY78 433 aaPredicted RBP23.11■■□□□ 1.29
PACS2-208ENST00000548796 TCP11L1Q9NUJ3 509 aa23.11■■□□□ 1.29
PACS2-208ENST00000548796 DDX60LQ5H9U9 1706 aaKnown RBP23.1■■□□□ 1.29
PACS2-208ENST00000548796 TFAP4Q01664 338 aa23.1■■□□□ 1.29
PACS2-208ENST00000548796 STRIP1Q5VSL9 837 aa23.1■■□□□ 1.29
PACS2-208ENST00000548796 NBPF11Q86T75 865 aa23.1■■□□□ 1.29
PACS2-208ENST00000548796 ANKS1AQ92625 1134 aa23.1■■□□□ 1.29
PACS2-208ENST00000548796 MRIQ9BWK5 157 aa23.1■■□□□ 1.29
PACS2-208ENST00000548796 TROAPQ12815 778 aa23.09■■□□□ 1.29
PACS2-208ENST00000548796 AKAP17AQ02040 695 aaKnown RBP23.08■■□□□ 1.29
PACS2-208ENST00000548796 C16orf86Q6ZW13 317 aa23.08■■□□□ 1.29
PACS2-208ENST00000548796 TEKT1Q969V4 418 aa23.08■■□□□ 1.29
PACS2-208ENST00000548796 DYNLL2Q96FJ2 89 aa23.08■■□□□ 1.29
PACS2-208ENST00000548796 USP28Q96RU2 1077 aa23.08■■□□□ 1.29
PACS2-208ENST00000548796 DBNDD1Q9H9R9 158 aa23.08■■□□□ 1.29
PACS2-208ENST00000548796 RTEL1Q9NZ71 1219 aa23.08■■□□□ 1.29
PACS2-208ENST00000548796 SAP30BPQ9UHR5 308 aaKnown RBP23.08■■□□□ 1.29
PACS2-208ENST00000548796 FOCADQ5VW36 1801 aa23.08■■□□□ 1.29
PACS2-208ENST00000548796 ECM29Q5VYK3 1845 aa23.08■■□□□ 1.29
PACS2-208ENST00000548796 ECE2O60344 883 aa23.08■■□□□ 1.28
PACS2-208ENST00000548796 PLCD1P51178 756 aa23.08■■□□□ 1.28
PACS2-208ENST00000548796 MYSM1Q5VVJ2 828 aa23.08■■□□□ 1.28
PACS2-208ENST00000548796 CTCFLQ8NI51 663 aaPredicted RBP23.08■■□□□ 1.28
PACS2-208ENST00000548796 SNED1Q8TER0 1413 aa23.08■■□□□ 1.28
PACS2-208ENST00000548796 MAP3K14Q99558 947 aa23.08■■□□□ 1.28
PACS2-208ENST00000548796 F8W031 263 aaPredicted RBP23.07■■□□□ 1.28
PACS2-208ENST00000548796 TSPY3P0CV98 308 aa23.07■■□□□ 1.28
PACS2-208ENST00000548796 TSPY8P0CW00 308 aa23.07■■□□□ 1.28
PACS2-208ENST00000548796 HDLBPQ00341 1268 aaKnown RBP23.07■■□□□ 1.28
PACS2-208ENST00000548796 KIAA2012Q0VF49 1180 aa23.07■■□□□ 1.28
PACS2-208ENST00000548796 GNL2Q13823 731 aaKnown RBP23.07■■□□□ 1.28
PACS2-208ENST00000548796 SAFBQ15424 915 aaKnown RBP eCLIP23.07■■□□□ 1.28
PACS2-208ENST00000548796 AIFM3Q96NN9 605 aa23.07■■□□□ 1.28
PACS2-208ENST00000548796 ZNF219Q9P2Y4 722 aaPredicted RBP23.07■■□□□ 1.28
PACS2-208ENST00000548796 PRPF3O43395 683 aaKnown RBP23.06■■□□□ 1.28
PACS2-208ENST00000548796 YEATS4O95619 227 aa23.06■■□□□ 1.28
PACS2-208ENST00000548796 XBP1P17861 261 aa23.06■■□□□ 1.28
PACS2-208ENST00000548796 SLC4A8Q2Y0W8 1093 aa23.06■■□□□ 1.28
PACS2-208ENST00000548796 TTLL6Q8N841 843 aa23.06■■□□□ 1.28
PACS2-208ENST00000548796 KAT14Q9H8E8 782 aa23.06■■□□□ 1.28
PACS2-208ENST00000548796 POLR3EQ9NVU0 708 aa23.06■■□□□ 1.28
PACS2-208ENST00000548796 USP17L3A6NCW0 530 aa23.05■■□□□ 1.28
PACS2-208ENST00000548796 USP17L4A6NCW7 530 aa23.05■■□□□ 1.28
PACS2-208ENST00000548796 KIF5BP33176 963 aa23.05■■□□□ 1.28
PACS2-208ENST00000548796 CDK8P49336 464 aa23.05■■□□□ 1.28
PACS2-208ENST00000548796 USP17L1Q7RTZ2 530 aa23.05■■□□□ 1.28
PACS2-208ENST00000548796 BICD2Q8TD16 824 aa23.05■■□□□ 1.28
PACS2-208ENST00000548796 PGBD1Q96JS3 809 aa23.05■■□□□ 1.28
PACS2-208ENST00000548796 PDGFDQ9GZP0 370 aaPredicted RBP23.05■■□□□ 1.28
PACS2-208ENST00000548796 GJB4Q9NTQ9 266 aa23.05■■□□□ 1.28
PACS2-208ENST00000548796 DDX19AQ9NUU7 478 aaKnown RBP23.05■■□□□ 1.28
PACS2-208ENST00000548796 MYH1P12882 1939 aa23.05■■□□□ 1.28
PACS2-208ENST00000548796 KIF28PB7ZC32 967 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 NMT2O60551 498 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 RASA1P20936 1047 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 U2AF2P26368 475 aaKnown RBP eCLIP23.04■■□□□ 1.28
PACS2-208ENST00000548796 TPRNQ4KMQ1 711 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 RCSD1Q6JBY9 416 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 TMTC3Q6ZXV5 915 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 RTKN2Q8IZC4 609 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 TSPY26PQ9H489 355 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 USP40Q9NVE5 1235 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 MMP1P03956 469 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 NASPP49321 788 aaPredicted RBP23.04■■□□□ 1.28
PACS2-208ENST00000548796 CEBPZQ03701 1054 aaKnown RBP23.04■■□□□ 1.28
PACS2-208ENST00000548796 CCDC93Q567U6 631 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 DACT2Q5SW24 774 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 KCNG4Q8TDN1 519 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 ZDHHC15Q96MV8 337 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 MXD3Q9BW11 206 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 IL17RBQ9NRM6 502 aa23.04■■□□□ 1.28
PACS2-208ENST00000548796 CRKP46108 304 aa23.03■■□□□ 1.28
PACS2-208ENST00000548796 FUT2Q10981 343 aa23.03■■□□□ 1.28
PACS2-208ENST00000548796 C21orf2O43822 256 aa23.02■■□□□ 1.28
PACS2-208ENST00000548796 GUCY1A2P33402 732 aa23.02■■□□□ 1.28
PACS2-208ENST00000548796 SCNN1DP51172 638 aa23.02■■□□□ 1.28
PACS2-208ENST00000548796 STK38Q15208 465 aa23.02■■□□□ 1.28
PACS2-208ENST00000548796 AOC3Q16853 763 aa23.02■■□□□ 1.28
PACS2-208ENST00000548796 CCDC82Q8N4S0 544 aa23.02■■□□□ 1.28
PACS2-208ENST00000548796 LINC00301Q8NCQ3 95 aa23.02■■□□□ 1.28
PACS2-208ENST00000548796 NEDD1Q8NHV4 660 aa23.02■■□□□ 1.28
PACS2-208ENST00000548796 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.02■■□□□ 1.28
PACS2-208ENST00000548796 WDHD1O75717 1129 aaPredicted RBP23.01■■□□□ 1.27
PACS2-208ENST00000548796 LIG1P18858 919 aa23.01■■□□□ 1.27
PACS2-208ENST00000548796 GNAQP50148 359 aa23.01■■□□□ 1.27
PACS2-208ENST00000548796 ANO1Q5XXA6 986 aa23.01■■□□□ 1.27
PACS2-208ENST00000548796 APOBEC3HQ6NTF7 200 aaKnown RBP23.01■■□□□ 1.27
PACS2-208ENST00000548796 SLC44A5Q8NCS7 719 aa23.01■■□□□ 1.27
PACS2-208ENST00000548796 PSMD1Q99460 953 aa23.01■■□□□ 1.27
PACS2-208ENST00000548796 FTOQ9C0B1 505 aaKnown RBP eCLIP23.01■■□□□ 1.27
PACS2-208ENST00000548796 NUP62CLQ9H1M0 184 aa23.01■■□□□ 1.27
PACS2-208ENST00000548796 FOXP1Q9H334 677 aaPredicted RBP23.01■■□□□ 1.27
PACS2-208ENST00000548796 PPIP5K2O43314 1243 aa23■■□□□ 1.27
PACS2-208ENST00000548796 PICALMQ13492 652 aa23■■□□□ 1.27
PACS2-208ENST00000548796 SF3A1Q15459 793 aaKnown RBP23■■□□□ 1.27
PACS2-208ENST00000548796 CDC42EP5Q6NZY7 148 aa23■■□□□ 1.27
PACS2-208ENST00000548796 CMTR1Q8N1G2 835 aaKnown RBP23■■□□□ 1.27
PACS2-208ENST00000548796 PNMA1Q8ND90 353 aa23■■□□□ 1.27
PACS2-208ENST00000548796 VPS33BQ9H267 617 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms