RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 CALM1P0DP23 149 aa24.26■■□□□ 1.47
RITA1-201ENST00000548278 CALM2P0DP24 149 aa24.26■■□□□ 1.47
RITA1-201ENST00000548278 CALM3P0DP25 149 aa24.26■■□□□ 1.47
RITA1-201ENST00000548278 PLCG2P16885 1265 aa24.26■■□□□ 1.47
RITA1-201ENST00000548278 RHBDL3P58872 404 aa24.26■■□□□ 1.47
RITA1-201ENST00000548278 EZH2Q15910 746 aaKnown RBP24.26■■□□□ 1.47
RITA1-201ENST00000548278 MAPKAPK5Q8IW41 473 aa24.26■■□□□ 1.47
RITA1-201ENST00000548278 KCNG4Q8TDN1 519 aa24.26■■□□□ 1.47
RITA1-201ENST00000548278 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.26■■□□□ 1.47
RITA1-201ENST00000548278 RNF26Q9BY78 433 aaPredicted RBP24.26■■□□□ 1.47
RITA1-201ENST00000548278 TSPY2A6NKD2 308 aa24.26■■□□□ 1.47
RITA1-201ENST00000548278 STK38Q15208 465 aa24.26■■□□□ 1.47
RITA1-201ENST00000548278 SLC15A2Q16348 729 aa24.26■■□□□ 1.47
RITA1-201ENST00000548278 ANO1Q5XXA6 986 aa24.26■■□□□ 1.47
RITA1-201ENST00000548278 AMOTL1Q8IY63 956 aa24.26■■□□□ 1.47
RITA1-201ENST00000548278 RBM28Q9NW13 759 aaKnown RBP24.26■■□□□ 1.47
RITA1-201ENST00000548278 TAOK2Q9UL54 1235 aa24.26■■□□□ 1.47
RITA1-201ENST00000548278 DDX60LQ5H9U9 1706 aaKnown RBP24.26■■□□□ 1.47
RITA1-201ENST00000548278 RCSD1Q6JBY9 416 aa24.25■■□□□ 1.47
RITA1-201ENST00000548278 C2CD5Q86YS7 1000 aa24.25■■□□□ 1.47
RITA1-201ENST00000548278 TEX11Q8IYF3 940 aa24.25■■□□□ 1.47
RITA1-201ENST00000548278 ZNF622Q969S3 477 aaKnown RBP eCLIP24.25■■□□□ 1.47
RITA1-201ENST00000548278 SUGT1Q9Y2Z0 365 aa24.25■■□□□ 1.47
RITA1-201ENST00000548278 MMP1P03956 469 aa24.25■■□□□ 1.47
RITA1-201ENST00000548278 PLCD1P51178 756 aa24.25■■□□□ 1.47
RITA1-201ENST00000548278 EN1Q05925 392 aaPredicted RBP24.25■■□□□ 1.47
RITA1-201ENST00000548278 SNW1Q13573 536 aaKnown RBP24.25■■□□□ 1.47
RITA1-201ENST00000548278 ADALQ6DHV7 355 aa24.25■■□□□ 1.47
RITA1-201ENST00000548278 PDLIM2Q96JY6 352 aa24.25■■□□□ 1.47
RITA1-201ENST00000548278 SPTLC2O15270 562 aa24.24■■□□□ 1.47
RITA1-201ENST00000548278 CCDC192P0DO97 292 aa24.24■■□□□ 1.47
RITA1-201ENST00000548278 GNL2Q13823 731 aaKnown RBP24.24■■□□□ 1.47
RITA1-201ENST00000548278 ENGASEQ8NFI3 743 aa24.24■■□□□ 1.47
RITA1-201ENST00000548278 SAP30BPQ9UHR5 308 aaKnown RBP24.24■■□□□ 1.47
RITA1-201ENST00000548278 A0A1W2PQ27 194 aa24.23■■□□□ 1.47
RITA1-201ENST00000548278 A0A1W2PQ64 194 aa24.23■■□□□ 1.47
RITA1-201ENST00000548278 A0A1W2PQD8 194 aa24.23■■□□□ 1.47
RITA1-201ENST00000548278 TFAP4Q01664 338 aa24.23■■□□□ 1.47
RITA1-201ENST00000548278 UVSSAQ2YD98 709 aa24.23■■□□□ 1.47
RITA1-201ENST00000548278 STYK1Q6J9G0 422 aa24.23■■□□□ 1.47
RITA1-201ENST00000548278 TMX4Q9H1E5 349 aaPredicted RBP24.23■■□□□ 1.47
RITA1-201ENST00000548278 PLEKHA8P1O95397 391 aa24.23■■□□□ 1.47
RITA1-201ENST00000548278 CKAP2LQ8IYA6 745 aa24.23■■□□□ 1.47
RITA1-201ENST00000548278 CERS5Q8N5B7 392 aa24.23■■□□□ 1.47
RITA1-201ENST00000548278 IL17RBQ9NRM6 502 aa24.23■■□□□ 1.47
RITA1-201ENST00000548278 DAGLAQ9Y4D2 1042 aa24.23■■□□□ 1.47
RITA1-201ENST00000548278 FLT1P17948 1338 aa24.22■■□□□ 1.47
RITA1-201ENST00000548278 PRPF3O43395 683 aaKnown RBP24.22■■□□□ 1.47
RITA1-201ENST00000548278 SLC39A14Q15043 492 aa24.22■■□□□ 1.47
RITA1-201ENST00000548278 SF3A1Q15459 793 aaKnown RBP24.22■■□□□ 1.47
RITA1-201ENST00000548278 PKN1Q16512 942 aa24.22■■□□□ 1.47
RITA1-201ENST00000548278 DOK7Q18PE1 504 aa24.22■■□□□ 1.47
RITA1-201ENST00000548278 CCDC73Q6ZRK6 1079 aa24.22■■□□□ 1.47
RITA1-201ENST00000548278 FSIP1Q8NA03 581 aa24.22■■□□□ 1.47
RITA1-201ENST00000548278 ANKS1AQ92625 1134 aa24.22■■□□□ 1.47
RITA1-201ENST00000548278 MKNK2Q9HBH9 465 aa24.22■■□□□ 1.47
RITA1-201ENST00000548278 KCNJ14Q9UNX9 436 aa24.22■■□□□ 1.47
RITA1-201ENST00000548278 QSER1Q2KHR3 1735 aa24.22■■□□□ 1.47
RITA1-201ENST00000548278 H0YIN7 160 aa24.22■■□□□ 1.47
RITA1-201ENST00000548278 FAM160A1Q05DH4 1040 aa24.22■■□□□ 1.47
RITA1-201ENST00000548278 TMTC3Q6ZXV5 915 aa24.22■■□□□ 1.47
RITA1-201ENST00000548278 FOCADQ5VW36 1801 aa24.22■■□□□ 1.47
RITA1-201ENST00000548278 BTBD18B2RXH4 712 aa24.21■■□□□ 1.47
RITA1-201ENST00000548278 SAFBQ15424 915 aaKnown RBP eCLIP24.21■■□□□ 1.47
RITA1-201ENST00000548278 DGKHQ86XP1 1220 aa24.21■■□□□ 1.47
RITA1-201ENST00000548278 NOSTRINQ8IVI9 506 aa24.21■■□□□ 1.47
RITA1-201ENST00000548278 DIS3L2Q8IYB7 885 aaKnown RBP24.21■■□□□ 1.47
RITA1-201ENST00000548278 SLC44A5Q8NCS7 719 aa24.21■■□□□ 1.47
RITA1-201ENST00000548278 MRPS27Q92552 414 aaKnown RBP24.21■■□□□ 1.47
RITA1-201ENST00000548278 STK32BQ9NY57 414 aa24.21■■□□□ 1.47
RITA1-201ENST00000548278 MYH1P12882 1939 aa24.21■■□□□ 1.47
RITA1-201ENST00000548278 AKAP17AQ02040 695 aaKnown RBP24.2■■□□□ 1.47
RITA1-201ENST00000548278 TYRO3Q06418 890 aa24.2■■□□□ 1.47
RITA1-201ENST00000548278 FBXW7Q969H0 707 aa24.2■■□□□ 1.47
RITA1-201ENST00000548278 EYA3Q99504 573 aa24.2■■□□□ 1.47
RITA1-201ENST00000548278 MAP3K14Q99558 947 aa24.2■■□□□ 1.47
RITA1-201ENST00000548278 FOXP1Q9H334 677 aaPredicted RBP24.2■■□□□ 1.47
RITA1-201ENST00000548278 TCP11L1Q9NUJ3 509 aa24.2■■□□□ 1.47
RITA1-201ENST00000548278 SLX4Q8IY92 1834 aa24.2■■□□□ 1.47
RITA1-201ENST00000548278 PTPAQ15257 358 aa24.2■■□□□ 1.46
RITA1-201ENST00000548278 CTCFLQ8NI51 663 aaPredicted RBP24.2■■□□□ 1.46
RITA1-201ENST00000548278 SHISA4Q96DD7 197 aa24.2■■□□□ 1.46
RITA1-201ENST00000548278 MRVI1Q9Y6F6 885 aa24.2■■□□□ 1.46
RITA1-201ENST00000548278 AXDND1Q5T1B0 1012 aaPredicted RBP24.19■■□□□ 1.46
RITA1-201ENST00000548278 C16orf86Q6ZW13 317 aa24.19■■□□□ 1.46
RITA1-201ENST00000548278 V9GY48 417 aaPredicted RBP24.19■■□□□ 1.46
RITA1-201ENST00000548278 RASA1P20936 1047 aa24.19■■□□□ 1.46
RITA1-201ENST00000548278 CCDC178Q5BJE1 867 aa24.19■■□□□ 1.46
RITA1-201ENST00000548278 FMR1NBQ8N0W7 255 aaPredicted RBP24.19■■□□□ 1.46
RITA1-201ENST00000548278 SRBD1Q8N5C6 995 aaKnown RBP24.19■■□□□ 1.46
RITA1-201ENST00000548278 TRIM44Q96DX7 344 aaPredicted RBP24.19■■□□□ 1.46
RITA1-201ENST00000548278 MXD3Q9BW11 206 aa24.19■■□□□ 1.46
RITA1-201ENST00000548278 CNTNAP5Q8WYK1 1306 aa24.18■■□□□ 1.46
RITA1-201ENST00000548278 ZNF444Q8N0Y2 327 aaPredicted RBP24.18■■□□□ 1.46
RITA1-201ENST00000548278 KAT14Q9H8E8 782 aa24.18■■□□□ 1.46
RITA1-201ENST00000548278 ZNF287Q9HBT7 754 aa24.18■■□□□ 1.46
RITA1-201ENST00000548278 USP17L3A6NCW0 530 aa24.17■■□□□ 1.46
RITA1-201ENST00000548278 USP17L4A6NCW7 530 aa24.17■■□□□ 1.46
RITA1-201ENST00000548278 CTAGE5O15320 804 aa24.17■■□□□ 1.46
RITA1-201ENST00000548278 TSPY3P0CV98 308 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms