RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 ZNF622Q969S3 477 aaKnown RBP eCLIP17.29■□□□□ 0.36
CHFR-223ENST00000544268 EPB41L4AQ9HCS5 686 aaPredicted RBP17.29■□□□□ 0.36
CHFR-223ENST00000544268 BIN1O00499 593 aa17.28■□□□□ 0.36
CHFR-223ENST00000544268 FAM160A1Q05DH4 1040 aa17.28■□□□□ 0.36
CHFR-223ENST00000544268 DHX40Q8IX18 779 aaKnown RBP17.28■□□□□ 0.36
CHFR-223ENST00000544268 LCORLQ8N3X6 602 aa17.28■□□□□ 0.36
CHFR-223ENST00000544268 CACTINQ8WUQ7 758 aaKnown RBP17.28■□□□□ 0.36
CHFR-223ENST00000544268 ZNF396Q96N95 335 aaPredicted RBP17.28■□□□□ 0.36
CHFR-223ENST00000544268 LTBP1Q14766 1721 aa17.28■□□□□ 0.36
CHFR-223ENST00000544268 C6orf229H3BNL8 230 aa17.28■□□□□ 0.36
CHFR-223ENST00000544268 KINO60870 393 aaKnown RBP17.28■□□□□ 0.36
CHFR-223ENST00000544268 PRDX5P30044 214 aa17.28■□□□□ 0.36
CHFR-223ENST00000544268 PSEN1P49768 467 aa17.28■□□□□ 0.36
CHFR-223ENST00000544268 NAA30Q147X3 362 aaPredicted RBP17.28■□□□□ 0.36
CHFR-223ENST00000544268 FMR1NBQ8N0W7 255 aaPredicted RBP17.28■□□□□ 0.36
CHFR-223ENST00000544268 CLIP2Q9UDT6 1046 aa17.28■□□□□ 0.36
CHFR-223ENST00000544268 CERS3Q8IU89 383 aa17.27■□□□□ 0.36
CHFR-223ENST00000544268 C16orf45Q96MC5 204 aaPredicted RBP17.27■□□□□ 0.36
CHFR-223ENST00000544268 ZKSCAN3Q9BRR0 538 aa17.27■□□□□ 0.36
CHFR-223ENST00000544268 CHRNA5P30532 468 aa17.27■□□□□ 0.35
CHFR-223ENST00000544268 STK38Q15208 465 aa17.27■□□□□ 0.35
CHFR-223ENST00000544268 MYSM1Q5VVJ2 828 aa17.27■□□□□ 0.35
CHFR-223ENST00000544268 RTEL1Q9NZ71 1219 aa17.27■□□□□ 0.35
CHFR-223ENST00000544268 MROH7-TTC4A0A0A0MT08 1334 aa17.26■□□□□ 0.35
CHFR-223ENST00000544268 H0YIN7 160 aa17.26■□□□□ 0.35
CHFR-223ENST00000544268 CLGNO14967 610 aa17.26■□□□□ 0.35
CHFR-223ENST00000544268 WDHD1O75717 1129 aaPredicted RBP17.26■□□□□ 0.35
CHFR-223ENST00000544268 MECOMQ03112 1051 aa17.26■□□□□ 0.35
CHFR-223ENST00000544268 CMTR1Q8N1G2 835 aaKnown RBP17.26■□□□□ 0.35
CHFR-223ENST00000544268 FBXL16Q8N461 479 aa17.26■□□□□ 0.35
CHFR-223ENST00000544268 AOPEPQ8N6M6 819 aa17.26■□□□□ 0.35
CHFR-223ENST00000544268 NSUN4Q96CB9 384 aaKnown RBP17.26■□□□□ 0.35
CHFR-223ENST00000544268 CD209Q9NNX6 404 aa17.26■□□□□ 0.35
CHFR-223ENST00000544268 KIF23Q02241 960 aaPredicted RBP17.26■□□□□ 0.35
CHFR-223ENST00000544268 SF3A1Q15459 793 aaKnown RBP17.26■□□□□ 0.35
CHFR-223ENST00000544268 DPCR1Q3MIW9 517 aa17.26■□□□□ 0.35
CHFR-223ENST00000544268 KMT5BQ4FZB7 885 aa17.26■□□□□ 0.35
CHFR-223ENST00000544268 MRPS27Q92552 414 aaKnown RBP17.26■□□□□ 0.35
CHFR-223ENST00000544268 PATL2C9JE40 543 aaKnown RBP17.25■□□□□ 0.35
CHFR-223ENST00000544268 RANBP6O60518 1105 aaKnown RBP17.25■□□□□ 0.35
CHFR-223ENST00000544268 STX1AQ16623 288 aa17.25■□□□□ 0.35
CHFR-223ENST00000544268 ILDR2Q71H61 639 aa17.25■□□□□ 0.35
CHFR-223ENST00000544268 CCDC82Q8N4S0 544 aa17.25■□□□□ 0.35
CHFR-223ENST00000544268 SDF4Q9BRK5 362 aa17.25■□□□□ 0.35
CHFR-223ENST00000544268 ANGEL1Q9UNK9 670 aaKnown RBP17.25■□□□□ 0.35
CHFR-223ENST00000544268 ERICH4A6NGS2 130 aa17.25■□□□□ 0.35
CHFR-223ENST00000544268 GSG1L2A8MUP6 293 aa17.25■□□□□ 0.35
CHFR-223ENST00000544268 SH2B2O14492 632 aaPredicted RBP17.25■□□□□ 0.35
CHFR-223ENST00000544268 METAP2P50579 478 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHFR-223ENST00000544268 APOA5Q6Q788 366 aa17.25■□□□□ 0.35
CHFR-223ENST00000544268 DUOX1Q9NRD9 1551 aa17.24■□□□□ 0.35
CHFR-223ENST00000544268 MAGEB6P1A0A0J9YX57 407 aa17.24■□□□□ 0.35
CHFR-223ENST00000544268 SPTLC2O15270 562 aa17.24■□□□□ 0.35
CHFR-223ENST00000544268 TRDNQ13061 729 aa17.24■□□□□ 0.35
CHFR-223ENST00000544268 STYK1Q6J9G0 422 aa17.24■□□□□ 0.35
CHFR-223ENST00000544268 IFNL3Q8IZI9 196 aa17.24■□□□□ 0.35
CHFR-223ENST00000544268 ALG1Q9BT22 464 aa17.24■□□□□ 0.35
CHFR-223ENST00000544268 FAM217BQ9NTX9 383 aaPredicted RBP17.24■□□□□ 0.35
CHFR-223ENST00000544268 SLC4A4Q9Y6R1 1079 aa17.24■□□□□ 0.35
CHFR-223ENST00000544268 USP27XA6NNY8 438 aa17.23■□□□□ 0.35
CHFR-223ENST00000544268 GOLGA6L19H0YKK7 550 aa17.23■□□□□ 0.35
CHFR-223ENST00000544268 RIMBP2O15034 1052 aa17.23■□□□□ 0.35
CHFR-223ENST00000544268 IL1R1P14778 569 aa17.23■□□□□ 0.35
CHFR-223ENST00000544268 GUCY1A2P33402 732 aa17.23■□□□□ 0.35
CHFR-223ENST00000544268 RRP12Q5JTH9 1297 aaKnown RBP17.23■□□□□ 0.35
CHFR-223ENST00000544268 ADALQ6DHV7 355 aa17.23■□□□□ 0.35
CHFR-223ENST00000544268 FILIP1Q7Z7B0 1213 aa17.23■□□□□ 0.35
CHFR-223ENST00000544268 WDR66Q8TBY9 1149 aa17.23■□□□□ 0.35
CHFR-223ENST00000544268 IGDCC4Q8TDY8 1250 aa17.23■□□□□ 0.35
CHFR-223ENST00000544268 RIOK1Q9BRS2 568 aaKnown RBP17.23■□□□□ 0.35
CHFR-223ENST00000544268 ZSWIM5Q9P217 1185 aa17.23■□□□□ 0.35
CHFR-223ENST00000544268 DYNLL1P63167 89 aaKnown RBP17.23■□□□□ 0.35
CHFR-223ENST00000544268 ALX1Q15699 326 aa17.23■□□□□ 0.35
CHFR-223ENST00000544268 DPP8Q6V1X1 898 aaPredicted RBP17.23■□□□□ 0.35
CHFR-223ENST00000544268 CLIC6Q96NY7 704 aa17.23■□□□□ 0.35
CHFR-223ENST00000544268 SLX4Q8IY92 1834 aa17.23■□□□□ 0.35
CHFR-223ENST00000544268 GNAT2P19087 354 aa17.22■□□□□ 0.35
CHFR-223ENST00000544268 GRIK5Q16478 980 aa17.22■□□□□ 0.35
CHFR-223ENST00000544268 AXDND1Q5T1B0 1012 aaPredicted RBP17.22■□□□□ 0.35
CHFR-223ENST00000544268 NFXL1Q6ZNB6 911 aa17.22■□□□□ 0.35
CHFR-223ENST00000544268 TRIM34Q9BYJ4 488 aa17.22■□□□□ 0.35
CHFR-223ENST00000544268 NAPBQ9H115 298 aa17.22■□□□□ 0.35
CHFR-223ENST00000544268 LY9Q9HBG7 655 aa17.22■□□□□ 0.35
CHFR-223ENST00000544268 BECN2A8MW95 431 aa17.22■□□□□ 0.35
CHFR-223ENST00000544268 CYP2C19P33261 490 aa17.22■□□□□ 0.35
CHFR-223ENST00000544268 PTPN21Q16825 1174 aa17.22■□□□□ 0.35
CHFR-223ENST00000544268 ANO1Q5XXA6 986 aa17.22■□□□□ 0.35
CHFR-223ENST00000544268 KRT40Q6A162 431 aa17.22■□□□□ 0.35
CHFR-223ENST00000544268 SDR42E1Q8WUS8 393 aa17.22■□□□□ 0.35
CHFR-223ENST00000544268 ZMYM6O95789 1325 aa17.22■□□□□ 0.35
CHFR-223ENST00000544268 CCDC88AQ3V6T2 1871 aa17.21■□□□□ 0.35
CHFR-223ENST00000544268 SPECC1Q5M775 1068 aa17.21■□□□□ 0.35
CHFR-223ENST00000544268 SPTY2D1Q68D10 685 aaPredicted RBP17.21■□□□□ 0.35
CHFR-223ENST00000544268 DZIP1Q86YF9 867 aaKnown RBP17.21■□□□□ 0.35
CHFR-223ENST00000544268 TMX4Q9H1E5 349 aaPredicted RBP17.21■□□□□ 0.35
CHFR-223ENST00000544268 TOMM22Q9NS69 142 aa17.21■□□□□ 0.35
CHFR-223ENST00000544268 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
CHFR-223ENST00000544268 SRCAPQ6ZRS2 3230 aa17.21■□□□□ 0.35
CHFR-223ENST00000544268 DHX16O60231 1041 aaKnown RBP17.21■□□□□ 0.35
CHFR-223ENST00000544268 ZNF202O95125 648 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms