RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 HMGB1P09429 215 aaKnown RBP6.95□□□□□ -1.3
ABCF1-207ENST00000542772 MCCP23508 829 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 GUCY1A2P33402 732 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 NF2P35240 595 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 JAG1P78504 1218 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 TFAP4Q01664 338 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 ADCK5Q3MIX3 580 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 CERKLQ49MI3 558 aaPredicted RBP6.95□□□□□ -1.3
ABCF1-207ENST00000542772 NOL9Q5SY16 702 aaKnown RBP6.95□□□□□ -1.3
ABCF1-207ENST00000542772 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.95□□□□□ -1.3
ABCF1-207ENST00000542772 SIAH1Q8IUQ4 282 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 MB21D2Q8IYB1 491 aaPredicted RBP6.95□□□□□ -1.3
ABCF1-207ENST00000542772 CRACR2BQ8N4Y2 399 aaPredicted RBP6.95□□□□□ -1.3
ABCF1-207ENST00000542772 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.95□□□□□ -1.3
ABCF1-207ENST00000542772 NCOA7Q8NI08 942 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 IGDCC4Q8TDY8 1250 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 MKL1Q969V6 931 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 TBC1D32Q96NH3 1257 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 NEK1Q96PY6 1258 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 AGXT2Q9BYV1 514 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 IL17RBQ9NRM6 502 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 TRPM7Q96QT4 1865 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 LAMB1P07942 1786 aa6.95□□□□□ -1.3
ABCF1-207ENST00000542772 PSMA5P28066 241 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 INPP5BP32019 993 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 IREB2P48200 963 aaKnown RBP6.94□□□□□ -1.3
ABCF1-207ENST00000542772 TRDNQ13061 729 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 COL9A3Q14050 684 aaPredicted RBP6.94□□□□□ -1.3
ABCF1-207ENST00000542772 CCDC178Q5BJE1 867 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 RUFY3Q7L099 469 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 CYB5R4Q7L1T6 521 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 DHX32Q7L7V1 743 aaKnown RBP6.94□□□□□ -1.3
ABCF1-207ENST00000542772 ARMC9Q7Z3E5 817 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 DGKHQ86XP1 1220 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 ANKRD13AQ8IZ07 590 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 C2orf69Q8N8R5 385 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 SLC44A5Q8NCS7 719 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 ESR2Q92731 530 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 HHIPL1Q96JK4 782 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 UPF2Q9HAU5 1272 aaKnown RBP6.94□□□□□ -1.3
ABCF1-207ENST00000542772 NYAP2Q9P242 653 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 WDR19Q8NEZ3 1342 aa6.94□□□□□ -1.3
ABCF1-207ENST00000542772 GREB1LQ9C091 1923 aaPredicted RBP6.93□□□□□ -1.3
ABCF1-207ENST00000542772 FAM196BA6NMK8 535 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 B4E1Z4 1266 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 KDM4AO75164 1064 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 PRDM1O75626 825 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 CELF2O95319 508 aaKnown RBP6.93□□□□□ -1.3
ABCF1-207ENST00000542772 ASNSP08243 561 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 AKR1B1P15121 316 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 MCM5P33992 734 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 LIFRP42702 1097 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 EVCP57679 992 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 ANTXR2P58335 489 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 SEC23AQ15436 765 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 ABCB5Q2M3G0 1257 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 SLC4A8Q2Y0W8 1093 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 RCSD1Q6JBY9 416 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 TMEM179Q6ZVK1 233 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 SAPCD2Q86UD0 394 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 SCYL3Q8IZE3 742 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 STK11IPQ8N1F8 1099 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 TMTC2Q8N394 836 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 ZKSCAN4Q969J2 545 aaPredicted RBP6.93□□□□□ -1.3
ABCF1-207ENST00000542772 TMEM87BQ96K49 555 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 WDR18Q9BV38 432 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 TBC1D2Q9BYX2 928 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 KANSL2Q9H9L4 492 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 GBA2Q9HCG7 927 aaPredicted RBP6.93□□□□□ -1.3
ABCF1-207ENST00000542772 CABP5Q9NP86 173 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 MTMR4Q9NYA4 1195 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 SYNPO2Q9UMS6 1093 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 ANGEL1Q9UNK9 670 aaKnown RBP6.93□□□□□ -1.3
ABCF1-207ENST00000542772 FZD1Q9UP38 647 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 AFG3L2Q9Y4W6 797 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 NEDD4P46934 1319 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 MYH8P13535 1937 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 PLIN4Q96Q06 1357 aa6.93□□□□□ -1.3
ABCF1-207ENST00000542772 PAPPA2Q9BXP8 1791 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 SPDYE5A6NIY4 337 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 TSPY2A6NKD2 308 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 TMEM88BA6NKF7 163 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 USP17L5A8MUK1 530 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 UBE2Q2LH0YL09 131 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 RANBP6O60518 1105 aaKnown RBP6.92□□□□□ -1.3
ABCF1-207ENST00000542772 GH2P01242 217 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 TSPY3P0CV98 308 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 TSPY8P0CW00 308 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 PTPRAP18433 802 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 RPS6KB1P23443 525 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 PPATQ06203 517 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 SEPT2Q15019 361 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 SH3D19Q5HYK7 790 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 FAM47AQ5JRC9 791 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 PPP4R3BQ5MIZ7 849 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 BLOC1S2Q6QNY1 142 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 MOB2Q70IA6 237 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 SGMS1Q86VZ5 419 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 IQCA1Q86XH1 822 aa6.92□□□□□ -1.3
ABCF1-207ENST00000542772 ERO1BQ86YB8 467 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms