RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 RIOK1Q9BRS2 568 aaKnown RBP24.5■■□□□ 1.51
DDB1-220ENST00000542337 EHD4Q9H223 541 aa24.5■■□□□ 1.51
DDB1-220ENST00000542337 ZBTB21Q9ULJ3 1066 aa24.5■■□□□ 1.51
DDB1-220ENST00000542337 ZNF532Q9HCE3 1301 aa24.5■■□□□ 1.51
DDB1-220ENST00000542337 TNPO2O14787 897 aaKnown RBP24.49■■□□□ 1.51
DDB1-220ENST00000542337 PRKCZQ05513 592 aa24.49■■□□□ 1.51
DDB1-220ENST00000542337 TNRC18O15417 2968 aaPredicted RBP24.48■■□□□ 1.51
DDB1-220ENST00000542337 UBXN2AP68543 259 aa24.48■■□□□ 1.51
DDB1-220ENST00000542337 IRX3P78415 501 aaPredicted RBP24.48■■□□□ 1.51
DDB1-220ENST00000542337 FAM110CQ1W6H9 321 aa24.48■■□□□ 1.51
DDB1-220ENST00000542337 PRPF38BQ5VTL8 546 aaKnown RBP24.48■■□□□ 1.51
DDB1-220ENST00000542337 COA7Q96BR5 231 aa24.48■■□□□ 1.51
DDB1-220ENST00000542337 CERKLQ49MI3 558 aaPredicted RBP24.47■■□□□ 1.51
DDB1-220ENST00000542337 TATDN1Q6P1N9 297 aa24.47■■□□□ 1.51
DDB1-220ENST00000542337 SLAIN1Q8ND83 568 aa24.47■■□□□ 1.51
DDB1-220ENST00000542337 HAUS7Q99871 368 aa24.47■■□□□ 1.51
DDB1-220ENST00000542337 ASCC2Q9H1I8 757 aaPredicted RBP24.47■■□□□ 1.51
DDB1-220ENST00000542337 CABP5Q9NP86 173 aa24.47■■□□□ 1.51
DDB1-220ENST00000542337 GH2P01242 217 aa24.46■■□□□ 1.51
DDB1-220ENST00000542337 JAG1P78504 1218 aa24.46■■□□□ 1.51
DDB1-220ENST00000542337 USP17L2Q6R6M4 530 aa24.46■■□□□ 1.51
DDB1-220ENST00000542337 MCM9Q9NXL9 1143 aa24.46■■□□□ 1.51
DDB1-220ENST00000542337 MYO5AQ9Y4I1 1855 aaKnown RBP24.45■■□□□ 1.51
DDB1-220ENST00000542337 PHIPQ8WWQ0 1821 aa24.45■■□□□ 1.5
DDB1-220ENST00000542337 HOXA7P31268 230 aaPredicted RBP24.45■■□□□ 1.5
DDB1-220ENST00000542337 ABCB5Q2M3G0 1257 aa24.45■■□□□ 1.5
DDB1-220ENST00000542337 ZSCAN25Q6NSZ9 544 aa24.45■■□□□ 1.5
DDB1-220ENST00000542337 EDC3Q96F86 508 aaKnown RBP24.45■■□□□ 1.5
DDB1-220ENST00000542337 GPATCH3Q96I76 525 aa24.45■■□□□ 1.5
DDB1-220ENST00000542337 FEZ1Q99689 392 aa24.45■■□□□ 1.5
DDB1-220ENST00000542337 TCRBV5S4A2TA0A5A2 114 aa24.44■■□□□ 1.5
DDB1-220ENST00000542337 FLT3LGP49771 235 aa24.44■■□□□ 1.5
DDB1-220ENST00000542337 RAB3GAP1Q15042 981 aa24.44■■□□□ 1.5
DDB1-220ENST00000542337 NKX2-3Q8TAU0 364 aa24.44■■□□□ 1.5
DDB1-220ENST00000542337 GABRQQ9UN88 632 aa24.44■■□□□ 1.5
DDB1-220ENST00000542337 PDE4DIPQ5VU43 2346 aa24.43■■□□□ 1.5
DDB1-220ENST00000542337 SMARCA5O60264 1052 aaPredicted RBP24.43■■□□□ 1.5
DDB1-220ENST00000542337 ADCY3O60266 1144 aa24.43■■□□□ 1.5
DDB1-220ENST00000542337 PLCD1P51178 756 aa24.43■■□□□ 1.5
DDB1-220ENST00000542337 DDRGK1Q96HY6 314 aa24.43■■□□□ 1.5
DDB1-220ENST00000542337 DCTPP1Q9H773 170 aa24.43■■□□□ 1.5
DDB1-220ENST00000542337 CENPFP49454 3210 aa24.42■■□□□ 1.5
DDB1-220ENST00000542337 ADD2P35612 726 aa24.42■■□□□ 1.5
DDB1-220ENST00000542337 USP14P54578 494 aa24.42■■□□□ 1.5
DDB1-220ENST00000542337 IRF5Q13568 498 aa24.42■■□□□ 1.5
DDB1-220ENST00000542337 SHROOM1Q2M3G4 852 aaPredicted RBP24.42■■□□□ 1.5
DDB1-220ENST00000542337 AMOTL1Q8IY63 956 aa24.42■■□□□ 1.5
DDB1-220ENST00000542337 LCORLQ8N3X6 602 aa24.42■■□□□ 1.5
DDB1-220ENST00000542337 GTF3C2Q8WUA4 911 aaPredicted RBP24.42■■□□□ 1.5
DDB1-220ENST00000542337 ARMT1Q9H993 441 aa24.42■■□□□ 1.5
DDB1-220ENST00000542337 ECHDC1Q9NTX5 307 aa24.42■■□□□ 1.5
DDB1-220ENST00000542337 TAOK2Q9UL54 1235 aa24.42■■□□□ 1.5
DDB1-220ENST00000542337 FOCADQ5VW36 1801 aa24.42■■□□□ 1.5
DDB1-220ENST00000542337 PTPRFP10586 1907 aa24.41■■□□□ 1.5
DDB1-220ENST00000542337 KIAA0100Q14667 2235 aaKnown RBP24.41■■□□□ 1.5
DDB1-220ENST00000542337 ZSWIM8A7E2V4 1837 aa24.41■■□□□ 1.5
DDB1-220ENST00000542337 UBE3CQ15386 1083 aa24.41■■□□□ 1.5
DDB1-220ENST00000542337 MTFR1Q15390 333 aa24.41■■□□□ 1.5
DDB1-220ENST00000542337 PXYLP1Q8TE99 480 aa24.41■■□□□ 1.5
DDB1-220ENST00000542337 SDR42E1Q8WUS8 393 aa24.41■■□□□ 1.5
DDB1-220ENST00000542337 P2RX7Q99572 595 aaKnown RBP24.41■■□□□ 1.5
DDB1-220ENST00000542337 RNF208Q9H0X6 261 aa24.41■■□□□ 1.5
DDB1-220ENST00000542337 DCP1AQ9NPI6 582 aaPredicted RBP24.41■■□□□ 1.5
DDB1-220ENST00000542337 ATP8A2Q9NTI2 1148 aa24.41■■□□□ 1.5
DDB1-220ENST00000542337 ATAD5Q96QE3 1844 aa24.4■■□□□ 1.5
DDB1-220ENST00000542337 MBD4O95243 580 aa24.4■■□□□ 1.5
DDB1-220ENST00000542337 CCL5P13501 91 aa24.4■■□□□ 1.5
DDB1-220ENST00000542337 CCAR1Q8IX12 1150 aaKnown RBP24.4■■□□□ 1.5
DDB1-220ENST00000542337 GPRC5AQ8NFJ5 357 aa24.4■■□□□ 1.5
DDB1-220ENST00000542337 MORF4L1Q9UBU8 362 aa24.4■■□□□ 1.5
DDB1-220ENST00000542337 SIPA1L1O43166 1804 aa24.4■■□□□ 1.5
DDB1-220ENST00000542337 CDK5RAP2Q96SN8 1893 aa24.39■■□□□ 1.5
DDB1-220ENST00000542337 SHMT1P34896 483 aa24.39■■□□□ 1.49
DDB1-220ENST00000542337 HERVK_113P62684 666 aa24.39■■□□□ 1.49
DDB1-220ENST00000542337 EMILIN3Q9NT22 766 aa24.39■■□□□ 1.49
DDB1-220ENST00000542337 MPHOSPH10O00566 681 aaKnown RBP24.38■■□□□ 1.49
DDB1-220ENST00000542337 GJB1P08034 283 aa24.38■■□□□ 1.49
DDB1-220ENST00000542337 GABPAQ06546 454 aa24.38■■□□□ 1.49
DDB1-220ENST00000542337 ZYXQ15942 572 aaKnown RBP24.38■■□□□ 1.49
DDB1-220ENST00000542337 SWAP70Q9UH65 585 aa24.38■■□□□ 1.49
DDB1-220ENST00000542337 MYH1P12882 1939 aa24.37■■□□□ 1.49
DDB1-220ENST00000542337 LOC285556D6RIA3 1793 aa24.37■■□□□ 1.49
DDB1-220ENST00000542337 USP17L15C9J2P7 530 aa24.37■■□□□ 1.49
DDB1-220ENST00000542337 USP17L13C9JLJ4 530 aa24.37■■□□□ 1.49
DDB1-220ENST00000542337 USP17L11C9JVI0 530 aa24.37■■□□□ 1.49
DDB1-220ENST00000542337 USP17L18D6R9N7 530 aa24.37■■□□□ 1.49
DDB1-220ENST00000542337 USP17L22D6RA61 530 aa24.37■■□□□ 1.49
DDB1-220ENST00000542337 USP17L17D6RBQ6 530 aa24.37■■□□□ 1.49
DDB1-220ENST00000542337 USP17L19D6RCP7 530 aa24.37■■□□□ 1.49
DDB1-220ENST00000542337 USP17L20D6RJB6 530 aa24.37■■□□□ 1.49
DDB1-220ENST00000542337 ELNP15502 786 aa24.37■■□□□ 1.49
DDB1-220ENST00000542337 USP17L24Q0WX57 530 aa24.37■■□□□ 1.49
DDB1-220ENST00000542337 C12orf42Q96LP6 360 aa24.37■■□□□ 1.49
DDB1-220ENST00000542337 KIAA1683Q9H0B3 1180 aa24.37■■□□□ 1.49
DDB1-220ENST00000542337 RBBP6Q7Z6E9 1792 aaKnown RBP24.37■■□□□ 1.49
DDB1-220ENST00000542337 GJA8P48165 433 aa24.36■■□□□ 1.49
DDB1-220ENST00000542337 PRKAB2O43741 272 aa24.35■■□□□ 1.49
DDB1-220ENST00000542337 INHAP05111 366 aa24.35■■□□□ 1.49
DDB1-220ENST00000542337 CAPN2P17655 700 aa24.35■■□□□ 1.49
DDB1-220ENST00000542337 RRP1P56182 461 aaKnown RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms