RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 FILIP1Q7Z7B0 1213 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 TAX1BP1Q86VP1 789 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 SPATS2Q86XZ4 545 aaKnown RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 PMFBP1Q8TBY8 1022 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 SMCR8Q8TEV9 937 aaPredicted RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 ZNF483Q8TF39 744 aaPredicted RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 CRBNQ96SW2 442 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 EIF3CQ99613 913 aaKnown RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 BAG1Q99933 345 aaPredicted RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 SRRTQ9BXP5 876 aaKnown RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 C22orf23Q9BZE7 217 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 DNAJC25Q9H1X3 360 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 KCND1Q9NSA2 647 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 IGSF5Q9NSI5 407 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 ZSCAN21Q9Y5A6 473 aaPredicted RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 CTDP1Q9Y5B0 961 aaPredicted RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 ABCC2Q92887 1545 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 ABCC10Q5T3U5 1492 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 FGD6Q6ZV73 1430 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 PNMA6FA0A0J9YX94 578 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 A6NNZ2 444 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 SKILP12757 684 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 TNNT1P13805 278 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 H2AFXP16104 143 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-219ENST00000542112 COPB2P35606 906 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 TRPC1P48995 793 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 CDR1P51861 262 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 RBM6P78332 1123 aaKnown RBP4.99□□□□□ -1.61
SNHG1-219ENST00000542112 TYRO3Q06418 890 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 SART3Q15020 963 aaKnown RBP4.99□□□□□ -1.61
SNHG1-219ENST00000542112 DBN1Q16643 649 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 NBPF8Q3BBV2 869 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 TUBB8Q3ZCM7 444 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 CCDC178Q5BJE1 867 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 FIGNL1Q6PIW4 674 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 CCDC80Q76M96 950 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 CCDC170Q8IYT3 715 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 ANKRD13AQ8IZ07 590 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 MYOCDQ8IZQ8 938 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 GBP7Q8N8V2 638 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-219ENST00000542112 LZICQ8WZA0 190 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 CCDC34Q96HJ3 373 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 CEP63Q96MT8 703 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 FRMD6Q96NE9 622 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 PLEKHG4BQ96PX9 1271 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 CSRNP1Q96S65 589 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 ARPC5LQ9BPX5 153 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 SLX1AQ9BQ83 275 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 GGNBP2Q9H3C7 697 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 TMX1Q9H3N1 280 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 ACBD3Q9H3P7 528 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 TSPY26PQ9H489 355 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 RMI1Q9H9A7 625 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 GPAMQ9HCL2 828 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 ATP13A2Q9NQ11 1180 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 MCM8Q9UJA3 840 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 DNMT3LQ9UJW3 386 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 THRAP3Q9Y2W1 955 aaKnown RBP4.99□□□□□ -1.61
SNHG1-219ENST00000542112 RTCBQ9Y3I0 505 aaKnown RBP4.99□□□□□ -1.61
SNHG1-219ENST00000542112 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.99□□□□□ -1.612e-26■□□□□ 8.9
SNHG1-219ENST00000542112 MAP3K5Q99683 1374 aa4.99□□□□□ -1.61
SNHG1-219ENST00000542112 TROQ12816 1431 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-219ENST00000542112 UACAQ9BZF9 1416 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 KDM5BQ9UGL1 1544 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 DNMT1P26358 1616 aaKnown RBP4.98□□□□□ -1.61
SNHG1-219ENST00000542112 PREX2Q70Z35 1606 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 MYO5CQ9NQX4 1742 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 GOLGA6L9A6NEM1 432 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 UBAP1LF5GYI3 381 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 TPD52L2O43399 206 aaKnown RBP4.98□□□□□ -1.61
SNHG1-219ENST00000542112 CBFA2T2O43439 604 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 OPA1O60313 960 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 MAN1A2O60476 641 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 RTN2O75298 545 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 E2F6O75461 281 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 RTN3O95197 1032 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-219ENST00000542112 CCDC175P0C221 793 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 HARSP12081 509 aaKnown RBP4.98□□□□□ -1.61
SNHG1-219ENST00000542112 RBM5P52756 815 aaKnown RBP eCLIP4.98□□□□□ -1.61
SNHG1-219ENST00000542112 GYS2P54840 703 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 DAB2P98082 770 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 TBC1D8BQ0IIM8 1120 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 MRPL58Q14197 206 aaKnown RBP4.98□□□□□ -1.61
SNHG1-219ENST00000542112 PDE3AQ14432 1141 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 IQCB1Q15051 598 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 TBC1D25Q3MII6 688 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 PREPLQ4J6C6 727 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-219ENST00000542112 WLSQ5T9L3 541 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 HHATQ5VTY9 493 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 NAIF1Q69YI7 327 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-219ENST00000542112 TMCO3Q6UWJ1 677 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 NFXL1Q6ZNB6 911 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 TMC4Q7Z404 712 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 ZNF438Q7Z4V0 828 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-219ENST00000542112 CATIPQ7Z7H3 387 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 MFN1Q8IWA4 741 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 WDR63Q8IWG1 891 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 IQCF2Q8IXL9 164 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 CMTR1Q8N1G2 835 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms