RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 NEFMP07197 916 aa8.67□□□□□ -1.02
SNHG1-205ENST00000537869 HCLS1P14317 486 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-205ENST00000537869 CANXP27824 592 aaKnown RBP8.67□□□□□ -1.02
SNHG1-205ENST00000537869 NKG7Q16617 165 aa8.67□□□□□ -1.02
SNHG1-205ENST00000537869 PRRT3Q5FWE3 981 aa8.67□□□□□ -1.02
SNHG1-205ENST00000537869 UBE3DQ7Z6J8 389 aa8.67□□□□□ -1.02
SNHG1-205ENST00000537869 HID1Q8IV36 788 aa8.67□□□□□ -1.02
SNHG1-205ENST00000537869 TMEM130Q8N3G9 435 aa8.67□□□□□ -1.02
SNHG1-205ENST00000537869 FAM13CQ8NE31 585 aa8.67□□□□□ -1.02
SNHG1-205ENST00000537869 CNTNAP5Q8WYK1 1306 aa8.67□□□□□ -1.02
SNHG1-205ENST00000537869 TMEM87BQ96K49 555 aa8.67□□□□□ -1.02
SNHG1-205ENST00000537869 ATXN3LQ9H3M9 355 aa8.67□□□□□ -1.02
SNHG1-205ENST00000537869 LTBP3Q9NS15 1303 aa8.67□□□□□ -1.02
SNHG1-205ENST00000537869 B2RBV5 119 aa8.66□□□□□ -1.02
SNHG1-205ENST00000537869 F8W735 103 aaPredicted RBP8.66□□□□□ -1.02
SNHG1-205ENST00000537869 PDPK1O15530 556 aa8.66□□□□□ -1.02
SNHG1-205ENST00000537869 RAG1P15918 1043 aa8.66□□□□□ -1.02
SNHG1-205ENST00000537869 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
SNHG1-205ENST00000537869 ASPAP45381 313 aa8.66□□□□□ -1.02
SNHG1-205ENST00000537869 SLC6A19Q695T7 634 aa8.66□□□□□ -1.02
SNHG1-205ENST00000537869 C6orf15Q6UXA7 325 aaPredicted RBP8.66□□□□□ -1.02
SNHG1-205ENST00000537869 C2CD4AQ8NCU7 369 aaPredicted RBP8.66□□□□□ -1.02
SNHG1-205ENST00000537869 GSX1Q9H4S2 264 aaPredicted RBP8.66□□□□□ -1.02
SNHG1-205ENST00000537869 RNGTTO60942 597 aaKnown RBP8.65□□□□□ -1.02
SNHG1-205ENST00000537869 POLR2BP30876 1174 aaKnown RBP8.65□□□□□ -1.02
SNHG1-205ENST00000537869 FDX2Q6P4F2 183 aa8.65□□□□□ -1.02
SNHG1-205ENST00000537869 CDC37L1Q7L3B6 337 aa8.65□□□□□ -1.02
SNHG1-205ENST00000537869 MRPL41Q8IXM3 137 aaKnown RBP8.65□□□□□ -1.02
SNHG1-205ENST00000537869 FAM178BQ8IXR5 827 aa8.65□□□□□ -1.02
SNHG1-205ENST00000537869 SLFN12Q8IYM2 578 aa8.65□□□□□ -1.02
SNHG1-205ENST00000537869 ISL2Q96A47 359 aa8.65□□□□□ -1.02
SNHG1-205ENST00000537869 RNPC3Q96LT9 517 aaKnown RBP8.65□□□□□ -1.02
SNHG1-205ENST00000537869 DNAJC7Q99615 494 aa8.65□□□□□ -1.02
SNHG1-205ENST00000537869 FAM105AQ9NUU6 356 aa8.65□□□□□ -1.02
SNHG1-205ENST00000537869 NOP53Q9NZM5 478 aaKnown RBP8.65□□□□□ -1.02
SNHG1-205ENST00000537869 PCDHB10Q9UN67 800 aa8.65□□□□□ -1.02
SNHG1-205ENST00000537869 ACTL7BQ9Y614 415 aa8.65□□□□□ -1.02
SNHG1-205ENST00000537869 WIPF1O43516 503 aa8.64□□□□□ -1.03
SNHG1-205ENST00000537869 YARSP54577 528 aaKnown RBP8.64□□□□□ -1.03
SNHG1-205ENST00000537869 RASGRF1Q13972 1273 aa8.64□□□□□ -1.03
SNHG1-205ENST00000537869 SLBPQ14493 270 aaKnown RBP eCLIP8.64□□□□□ -1.032e-8■□□□□ 9.6
SNHG1-205ENST00000537869 LILRB2Q8N423 598 aa8.64□□□□□ -1.03
SNHG1-205ENST00000537869 BEND7Q8N7W2 519 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-205ENST00000537869 KIF2CQ99661 725 aa8.64□□□□□ -1.03
SNHG1-205ENST00000537869 DPH2Q9BQC3 489 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-205ENST00000537869 PIDD1Q9HB75 910 aa8.64□□□□□ -1.03
SNHG1-205ENST00000537869 SLC12A7Q9Y666 1083 aa8.64□□□□□ -1.03
SNHG1-205ENST00000537869 ANKRD34AQ69YU3 496 aa8.63□□□□□ -1.03
SNHG1-205ENST00000537869 MRM1Q6IN84 353 aaKnown RBP8.63□□□□□ -1.03
SNHG1-205ENST00000537869 ZNF662Q6ZS27 426 aa8.63□□□□□ -1.03
SNHG1-205ENST00000537869 SSU72Q9NP77 194 aaKnown RBP8.63□□□□□ -1.03
SNHG1-205ENST00000537869 IFRD2Q12894 506 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-205ENST00000537869 TCEAL1Q15170 157 aa8.62□□□□□ -1.03
SNHG1-205ENST00000537869 EGFLAMQ63HQ2 1017 aa8.62□□□□□ -1.03
SNHG1-205ENST00000537869 VHLLQ6RSH7 139 aa8.62□□□□□ -1.03
SNHG1-205ENST00000537869 SMYD4Q8IYR2 804 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-205ENST00000537869 PHACTR4Q8IZ21 702 aa8.62□□□□□ -1.03
SNHG1-205ENST00000537869 KCT2Q8NC54 265 aa8.62□□□□□ -1.03
SNHG1-205ENST00000537869 LENG1Q96BZ8 264 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-205ENST00000537869 AKTIPQ9H8T0 292 aa8.62□□□□□ -1.03
SNHG1-205ENST00000537869 USP21Q9UK80 565 aa8.62□□□□□ -1.03
SNHG1-205ENST00000537869 ADAMTS8Q9UP79 889 aa8.62□□□□□ -1.03
SNHG1-205ENST00000537869 RGS13O14921 159 aa8.61□□□□□ -1.03
SNHG1-205ENST00000537869 PREPP48147 710 aa8.61□□□□□ -1.03
SNHG1-205ENST00000537869 PRAMEF13Q5VWM6 474 aa8.61□□□□□ -1.03
SNHG1-205ENST00000537869 PODNQ7Z5L7 613 aa8.61□□□□□ -1.03
SNHG1-205ENST00000537869 TMEM192Q8IY95 271 aa8.61□□□□□ -1.03
SNHG1-205ENST00000537869 BAHD1Q8TBE0 780 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-205ENST00000537869 CCDC74BQ96LY2 380 aa8.61□□□□□ -1.03
SNHG1-205ENST00000537869 PHAXQ9H814 394 aaKnown RBP8.61□□□□□ -1.03
SNHG1-205ENST00000537869 KANSL2Q9H9L4 492 aa8.61□□□□□ -1.03
SNHG1-205ENST00000537869 UBOX5O94941 541 aa8.6□□□□□ -1.03
SNHG1-205ENST00000537869 CST3P01034 146 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-205ENST00000537869 SPATA31C1P0DKV0 1188 aa8.6□□□□□ -1.03
SNHG1-205ENST00000537869 COL8A1P27658 744 aa8.6□□□□□ -1.03
SNHG1-205ENST00000537869 CAP2P40123 477 aa8.6□□□□□ -1.03
SNHG1-205ENST00000537869 KIAA1211LQ6NV74 962 aa8.6□□□□□ -1.03
SNHG1-205ENST00000537869 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.6□□□□□ -1.03
SNHG1-205ENST00000537869 XAGE3Q8WTP9 111 aa8.6□□□□□ -1.03
SNHG1-205ENST00000537869 KLHL6Q8WZ60 621 aa8.6□□□□□ -1.03
SNHG1-205ENST00000537869 PCOLCE2Q9UKZ9 415 aa8.6□□□□□ -1.03
SNHG1-205ENST00000537869 ZNF214Q9UL59 606 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-205ENST00000537869 SBNO2Q9Y2G9 1366 aa8.6□□□□□ -1.03
SNHG1-205ENST00000537869 SART1O43290 800 aaKnown RBP8.59□□□□□ -1.03
SNHG1-205ENST00000537869 GLB1P16278 677 aa8.59□□□□□ -1.03
SNHG1-205ENST00000537869 GBP1P32455 592 aa8.59□□□□□ -1.03
SNHG1-205ENST00000537869 CCNFP41002 786 aa8.59□□□□□ -1.03
SNHG1-205ENST00000537869 CHMP4BP1P59074 171 aa8.59□□□□□ -1.03
SNHG1-205ENST00000537869 SLC7A5Q01650 507 aa8.59□□□□□ -1.03
SNHG1-205ENST00000537869 NCAPHQ15003 741 aa8.59□□□□□ -1.03
SNHG1-205ENST00000537869 GNPTABQ3T906 1256 aa8.59□□□□□ -1.03
SNHG1-205ENST00000537869 MTERF2Q49AM1 385 aa8.59□□□□□ -1.03
SNHG1-205ENST00000537869 CDPF1Q6NVV7 123 aa8.59□□□□□ -1.03
SNHG1-205ENST00000537869 SPATC1Q76KD6 591 aa8.59□□□□□ -1.03
SNHG1-205ENST00000537869 SH3TC2Q8TF17 1288 aa8.59□□□□□ -1.03
SNHG1-205ENST00000537869 SLC6A18Q96N87 628 aa8.59□□□□□ -1.03
SNHG1-205ENST00000537869 UBL7Q96S82 380 aaPredicted RBP8.59□□□□□ -1.03
SNHG1-205ENST00000537869 FOXQ1Q9C009 403 aa8.59□□□□□ -1.03
SNHG1-205ENST00000537869 PFDN2Q9UHV9 154 aa8.59□□□□□ -1.03
SNHG1-205ENST00000537869 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms