RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 FBXO33Q7Z6M2 555 aa6.19□□□□□ -1.42
USP48-215ENST00000534705 PDZD3Q86UT5 571 aa6.19□□□□□ -1.42
USP48-215ENST00000534705 C3orf58Q8NDZ4 430 aa6.19□□□□□ -1.42
USP48-215ENST00000534705 SLC26A8Q96RN1 970 aa6.19□□□□□ -1.42
USP48-215ENST00000534705 SETDB2Q96T68 719 aa6.19□□□□□ -1.42
USP48-215ENST00000534705 EMILIN2Q9BXX0 1053 aa6.19□□□□□ -1.42
USP48-215ENST00000534705 C12orf49Q9H741 205 aa6.19□□□□□ -1.42
USP48-215ENST00000534705 PRDM5Q9NQX1 630 aaPredicted RBP6.19□□□□□ -1.42
USP48-215ENST00000534705 C19orf73Q9NVV2 129 aa6.19□□□□□ -1.42
USP48-215ENST00000534705 SMG5Q9UPR3 1016 aaKnown RBP6.19□□□□□ -1.42
USP48-215ENST00000534705 JAG2Q9Y219 1238 aa6.19□□□□□ -1.42
USP48-215ENST00000534705 NUAK1O60285 661 aa6.18□□□□□ -1.42
USP48-215ENST00000534705 RAC2P15153 192 aa6.18□□□□□ -1.42
USP48-215ENST00000534705 KCNN1Q92952 543 aa6.18□□□□□ -1.42
USP48-215ENST00000534705 FAM8A1Q9UBU6 413 aa6.18□□□□□ -1.42
USP48-215ENST00000534705 GPN3Q9UHW5 284 aaPredicted RBP6.18□□□□□ -1.42
USP48-215ENST00000534705 WWC3Q9ULE0 1092 aa6.18□□□□□ -1.42
USP48-215ENST00000534705 ARNTP27540 789 aa6.17□□□□□ -1.42
USP48-215ENST00000534705 DBX2Q6ZNG2 339 aa6.17□□□□□ -1.42
USP48-215ENST00000534705 CDC37L1Q7L3B6 337 aa6.17□□□□□ -1.42
USP48-215ENST00000534705 KCT2Q8NC54 265 aa6.17□□□□□ -1.42
USP48-215ENST00000534705 ABHD4Q8TB40 342 aa6.17□□□□□ -1.42
USP48-215ENST00000534705 OSBPL7Q9BZF2 842 aa6.17□□□□□ -1.42
USP48-215ENST00000534705 SEMA3GQ9NS98 782 aa6.17□□□□□ -1.42
USP48-215ENST00000534705 FAM155AB1AL88 458 aaPredicted RBP6.16□□□□□ -1.42
USP48-215ENST00000534705 ETV2O00321 342 aaPredicted RBP6.16□□□□□ -1.42
USP48-215ENST00000534705 EOMESO95936 686 aa6.16□□□□□ -1.42
USP48-215ENST00000534705 SRFP11831 508 aa6.16□□□□□ -1.42
USP48-215ENST00000534705 ITGAEP38570 1179 aa6.16□□□□□ -1.42
USP48-215ENST00000534705 SULF2Q8IWU5 870 aa6.16□□□□□ -1.42
USP48-215ENST00000534705 C20orf173Q96LM9 149 aa6.16□□□□□ -1.42
USP48-215ENST00000534705 HSPA12BQ96MM6 686 aa6.16□□□□□ -1.42
USP48-215ENST00000534705 CEP44Q9C0F1 390 aa6.16□□□□□ -1.42
USP48-215ENST00000534705 ATP13A1Q9HD20 1204 aa6.16□□□□□ -1.42
USP48-215ENST00000534705 PICK1Q9NRD5 415 aa6.16□□□□□ -1.42
USP48-215ENST00000534705 EIF4BP23588 611 aaKnown RBP6.15□□□□□ -1.42
USP48-215ENST00000534705 LINC00310P59036 64 aa6.15□□□□□ -1.42
USP48-215ENST00000534705 TMCO4Q5TGY1 634 aa6.15□□□□□ -1.42
USP48-215ENST00000534705 C22orf34Q6ZV56 151 aa6.15□□□□□ -1.42
USP48-215ENST00000534705 ALPK1Q96QP1 1244 aa6.15□□□□□ -1.42
USP48-215ENST00000534705 DUSP9Q99956 384 aaKnown RBP6.15□□□□□ -1.42
USP48-215ENST00000534705 PARD6AQ9NPB6 346 aa6.15□□□□□ -1.42
USP48-215ENST00000534705 FANCGO15287 622 aa6.14□□□□□ -1.43
USP48-215ENST00000534705 USP17L7P0C7H9 530 aa6.14□□□□□ -1.43
USP48-215ENST00000534705 NME2P22392 152 aa6.14□□□□□ -1.43
USP48-215ENST00000534705 MAP1SQ66K74 1059 aaPredicted RBP6.14□□□□□ -1.43
USP48-215ENST00000534705 SCARA3Q6AZY7 606 aa6.14□□□□□ -1.43
USP48-215ENST00000534705 THAP5Q7Z6K1 395 aa6.14□□□□□ -1.43
USP48-215ENST00000534705 GPBAR1Q8TDU6 330 aa6.14□□□□□ -1.43
USP48-215ENST00000534705 ACSBG1Q96GR2 724 aa6.14□□□□□ -1.43
USP48-215ENST00000534705 NECAB3Q96P71 396 aaPredicted RBP6.14□□□□□ -1.43
USP48-215ENST00000534705 AKAP2Q9Y2D5 859 aa6.14□□□□□ -1.43
USP48-215ENST00000534705 AK5Q9Y6K8 562 aa6.14□□□□□ -1.43
USP48-215ENST00000534705 LRIG2O94898 1065 aa6.13□□□□□ -1.43
USP48-215ENST00000534705 DAB2P98082 770 aa6.13□□□□□ -1.43
USP48-215ENST00000534705 PPM1JQ5JR12 505 aa6.13□□□□□ -1.43
USP48-215ENST00000534705 SFRP5Q5T4F7 317 aa6.13□□□□□ -1.43
USP48-215ENST00000534705 CDKAL1Q5VV42 579 aa6.13□□□□□ -1.43
USP48-215ENST00000534705 TMC4Q7Z404 712 aa6.13□□□□□ -1.43
USP48-215ENST00000534705 MFSD4AQ8N468 514 aa6.13□□□□□ -1.43
USP48-215ENST00000534705 SAMM50Q9Y512 469 aa6.13□□□□□ -1.43
USP48-215ENST00000534705 FOXD2O60548 495 aaPredicted RBP6.12□□□□□ -1.43
USP48-215ENST00000534705 TTC6Q86TZ1 520 aa6.12□□□□□ -1.43
USP48-215ENST00000534705 IRF2BPLQ9H1B7 796 aa6.12□□□□□ -1.43
USP48-215ENST00000534705 ZCCHC4Q9H5U6 513 aa6.12□□□□□ -1.43
USP48-215ENST00000534705 CACNA2D2Q9NY47 1150 aa6.12□□□□□ -1.43
USP48-215ENST00000534705 PARP2Q9UGN5 583 aa6.12□□□□□ -1.43
USP48-215ENST00000534705 H3BS24 57 aa6.11□□□□□ -1.43
USP48-215ENST00000534705 ENC1O14682 589 aa6.11□□□□□ -1.43
USP48-215ENST00000534705 RING1Q06587 406 aa6.11□□□□□ -1.43
USP48-215ENST00000534705 ZNF252P-AS1Q0IIN9 211 aa6.11□□□□□ -1.43
USP48-215ENST00000534705 PSMD2Q13200 908 aa6.11□□□□□ -1.43
USP48-215ENST00000534705 ZBTB37Q5TC79 503 aa6.11□□□□□ -1.43
USP48-215ENST00000534705 SV2BQ7L1I2 683 aa6.11□□□□□ -1.43
USP48-215ENST00000534705 ARMCX6Q7L4S7 300 aa6.11□□□□□ -1.43
USP48-215ENST00000534705 ZNF507Q8TCN5 953 aa6.11□□□□□ -1.43
USP48-215ENST00000534705 MYLIPQ8WY64 445 aa6.11□□□□□ -1.43
USP48-215ENST00000534705 KCNK12Q9HB15 430 aa6.11□□□□□ -1.43
USP48-215ENST00000534705 CBX8Q9HC52 389 aa6.11□□□□□ -1.43
USP48-215ENST00000534705 TPX2Q9ULW0 747 aaKnown RBP6.11□□□□□ -1.43
USP48-215ENST00000534705 CSADQ9Y600 493 aa6.11□□□□□ -1.43
USP48-215ENST00000534705 SYN1P17600 705 aa6.1□□□□□ -1.43
USP48-215ENST00000534705 NTF4P34130 210 aa6.1□□□□□ -1.43
USP48-215ENST00000534705 ST13P50502 369 aaKnown RBP6.1□□□□□ -1.43
USP48-215ENST00000534705 KRTAP5-3Q6L8H2 238 aa6.1□□□□□ -1.43
USP48-215ENST00000534705 ZNF746Q6NUN9 644 aaPredicted RBP6.1□□□□□ -1.43
USP48-215ENST00000534705 TPTE2Q6XPS3 522 aa6.1□□□□□ -1.43
USP48-215ENST00000534705 STK35Q8TDR2 534 aa6.1□□□□□ -1.43
USP48-215ENST00000534705 SLAMF8Q9P0V8 285 aa6.1□□□□□ -1.43
USP48-215ENST00000534705 DCDC2CA8MYV0 355 aa6.09□□□□□ -1.43
USP48-215ENST00000534705 TRIM37O94972 964 aa6.09□□□□□ -1.43
USP48-215ENST00000534705 BMP7P18075 431 aa6.09□□□□□ -1.43
USP48-215ENST00000534705 MFAP1P55081 439 aaKnown RBP6.09□□□□□ -1.43
USP48-215ENST00000534705 XPCQ01831 940 aaPredicted RBP6.09□□□□□ -1.43
USP48-215ENST00000534705 C12orf40Q86WS4 652 aa6.09□□□□□ -1.43
USP48-215ENST00000534705 CRELD1Q96HD1 420 aa6.09□□□□□ -1.43
USP48-215ENST00000534705 COX4I2Q96KJ9 171 aa6.09□□□□□ -1.43
USP48-215ENST00000534705 BCL2L13Q9BXK5 485 aa6.09□□□□□ -1.43
USP48-215ENST00000534705 BCL11AQ9H165 835 aa6.09□□□□□ -1.43
USP48-215ENST00000534705 TTF2Q9UNY4 1162 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms