RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 CXorf56Q9H5V9 222 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 RNF113AO15541 343 aaKnown RBP11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 ZMYND10O75800 440 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 CLTAP09496 248 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 KSR2Q6VAB6 950 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 STAP2Q9UGK3 403 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 OVOS2A0A0J9YW53 1432 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 ATP5J2-PTCD1G3V325 749 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 PTCD1O75127 700 aaKnown RBP11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 ZC3H6P61129 1189 aaKnown RBP11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 NBPF6Q5VWK0 638 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 WWC2Q6AWC2 1192 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 OVOS2Q6IE36 1432 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 LMBR1Q8WVP7 490 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 NBPF4Q96M43 638 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 STIM2Q9P246 746 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 ABCF2Q9UG63 623 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 SUFUQ9UMX1 484 aa11.45□□□□□ -0.58
NCAPD3-214ENST00000534548 BICDL2A1A5D9 508 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 IKBKBO14920 756 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 HGSO14964 777 aaPredicted RBP11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 GIGYF1O75420 1035 aaPredicted RBP11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 HMGB2P26583 209 aaKnown RBP11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 ASIC1P78348 528 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 RAB34Q9BZG1 259 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 UBA5Q9GZZ9 404 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 CMA1P23946 247 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 CETN2P41208 172 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 TMEM266Q2M3C6 531 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 CCDC38Q502W7 563 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 GKAP1Q5VSY0 366 aaPredicted RBP11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 MAPK8IP1Q9UQF2 711 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 STK38LQ9Y2H1 464 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 CFAP221Q4G0U5 840 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 RILPL1Q5EBL4 403 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 TRIM68Q6AZZ1 485 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 CHUKO15111 745 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 MXRA7P84157 204 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 MUM1L1Q5H9M0 696 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 KLHL7Q8IXQ5 586 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 CCDC26Q8TAB7 109 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 KLHDC4Q8TBB5 520 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 CABP5Q9NP86 173 aa11.44□□□□□ -0.58
NCAPD3-214ENST00000534548 SETSIPP0DME0 302 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 TFCP2Q12800 502 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 CEP63Q96MT8 703 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 A0A1W2PQ27 194 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 A0A1W2PQ64 194 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 A0A1W2PQD8 194 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 PRAMEF22A3QJZ6 481 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 PAK1Q13153 545 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 TTF1Q15361 905 aaPredicted RBP11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 NBPF14Q5TI25 921 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 SPTY2D1Q68D10 685 aaPredicted RBP11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 SPATA24Q86W54 205 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 PI4K2BQ8TCG2 481 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 NOX5Q96PH1 765 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 CCDC77Q9BR77 488 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 HAUS4Q9H6D7 363 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 GEMIN8Q9NWZ8 242 aaKnown RBP11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 SALL3Q9BXA9 1300 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 ENC1O14682 589 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 EVA1CP58658 441 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 CCDC170Q8IYT3 715 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 NOC4LQ9BVI4 516 aaKnown RBP11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 HELLSQ9NRZ9 838 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 MTRF1LQ9UGC7 380 aaKnown RBP11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 SERTAD1Q9UHV2 236 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 GUCY2CP25092 1073 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 ZBTB16Q05516 673 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 IKQ13123 557 aaPredicted RBP11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 PROSER3Q2NL68 480 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 KRT71Q3SY84 523 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 VSTM4Q8IW00 320 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 KRT23Q9C075 422 aa11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 FTOQ9C0B1 505 aaKnown RBP eCLIP11.43□□□□□ -0.58
NCAPD3-214ENST00000534548 VWA3AA6NCI4 1184 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 IFIT5Q13325 482 aaKnown RBP11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 ZKSCAN8Q15776 578 aaPredicted RBP11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 ZNF827Q17R98 1081 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 CCDC25Q86WR0 208 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 CLIC4Q9Y696 253 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 PFKFB2O60825 505 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 EIF4A1P60842 406 aaKnown RBP11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 RCOR1Q9UKL0 485 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 PHF8Q9UPP1 1060 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 USP5P45974 858 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 KRT40Q6A162 431 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 HOOK3Q86VS8 718 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 TMTC2Q8N394 836 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 LINS1Q8NG48 757 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 OR8K1Q8NGG5 319 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 STMN2Q93045 179 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 NUP58Q9BVL2 599 aa11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 TRIM6Q9C030 488 aaPredicted RBP11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 OSBPL5Q9H0X9 879 aaPredicted RBP11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.42□□□□□ -0.581e-7■■■■■ 109.9
NCAPD3-214ENST00000534548 CEP170BQ9Y4F5 1589 aaPredicted RBP11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 CTNNA1P35221 906 aaKnown RBP11.42□□□□□ -0.58
NCAPD3-214ENST00000534548 KRT2P35908 639 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms