RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 NOL9Q5SY16 702 aaKnown RBP20.07■□□□□ 0.8
SF3B2-211ENST00000531041 SAPCD2Q86UD0 394 aa20.07■□□□□ 0.8
SF3B2-211ENST00000531041 ZKSCAN4Q969J2 545 aaPredicted RBP20.07■□□□□ 0.8
SF3B2-211ENST00000531041 INCENPQ9NQS7 918 aa20.07■□□□□ 0.8
SF3B2-211ENST00000531041 GINM1Q9NU53 330 aa20.07■□□□□ 0.8
SF3B2-211ENST00000531041 TLL2Q9Y6L7 1015 aa20.07■□□□□ 0.8
SF3B2-211ENST00000531041 PTPRFP10586 1907 aa20.07■□□□□ 0.8
SF3B2-211ENST00000531041 PRDM1O75626 825 aa20.06■□□□□ 0.8
SF3B2-211ENST00000531041 VGLL4Q14135 290 aa20.06■□□□□ 0.8
SF3B2-211ENST00000531041 TSGA10IPQ3SY00 556 aa20.06■□□□□ 0.8
SF3B2-211ENST00000531041 ZNF444Q8N0Y2 327 aaPredicted RBP20.06■□□□□ 0.8
SF3B2-211ENST00000531041 KCNB2Q92953 911 aa20.06■□□□□ 0.8
SF3B2-211ENST00000531041 CREBZFQ9NS37 354 aa20.06■□□□□ 0.8
SF3B2-211ENST00000531041 CSADQ9Y600 493 aa20.06■□□□□ 0.8
SF3B2-211ENST00000531041 NT5C2P49902 561 aa20.05■□□□□ 0.8
SF3B2-211ENST00000531041 HUNKP57058 714 aa20.05■□□□□ 0.8
SF3B2-211ENST00000531041 C1QTNF8P60827 252 aa20.05■□□□□ 0.8
SF3B2-211ENST00000531041 SCYL3Q8IZE3 742 aa20.05■□□□□ 0.8
SF3B2-211ENST00000531041 BACH2Q9BYV9 841 aa20.05■□□□□ 0.8
SF3B2-211ENST00000531041 CNNM2Q9H8M5 875 aa20.05■□□□□ 0.8
SF3B2-211ENST00000531041 TAF6LQ9Y6J9 622 aa20.05■□□□□ 0.8
SF3B2-211ENST00000531041 NEDD4P46934 1319 aa20.04■□□□□ 0.8
SF3B2-211ENST00000531041 E7EWF7 191 aa20.04■□□□□ 0.8
SF3B2-211ENST00000531041 GDF11O95390 407 aa20.04■□□□□ 0.8
SF3B2-211ENST00000531041 ASNSP08243 561 aa20.04■□□□□ 0.8
SF3B2-211ENST00000531041 ZKSCAN1P17029 563 aaPredicted RBP20.04■□□□□ 0.8
SF3B2-211ENST00000531041 ABCB5Q2M3G0 1257 aa20.04■□□□□ 0.8
SF3B2-211ENST00000531041 HHIPL1Q96JK4 782 aa20.04■□□□□ 0.8
SF3B2-211ENST00000531041 SNCAIPQ9Y6H5 919 aa20.04■□□□□ 0.8
SF3B2-211ENST00000531041 AKR1B1P15121 316 aa20.03■□□□□ 0.8
SF3B2-211ENST00000531041 MCCP23508 829 aa20.03■□□□□ 0.8
SF3B2-211ENST00000531041 JAG1P78504 1218 aa20.03■□□□□ 0.8
SF3B2-211ENST00000531041 RASEFQ8IZ41 740 aa20.03■□□□□ 0.8
SF3B2-211ENST00000531041 CLMNQ96JQ2 1002 aa20.03■□□□□ 0.8
SF3B2-211ENST00000531041 KRT23Q9C075 422 aa20.03■□□□□ 0.8
SF3B2-211ENST00000531041 CABP5Q9NP86 173 aa20.03■□□□□ 0.8
SF3B2-211ENST00000531041 PICK1Q9NRD5 415 aa20.03■□□□□ 0.8
SF3B2-211ENST00000531041 TOMM22Q9NS69 142 aa20.03■□□□□ 0.8
SF3B2-211ENST00000531041 ZBTB21Q9ULJ3 1066 aa20.03■□□□□ 0.8
SF3B2-211ENST00000531041 ABT1Q9ULW3 272 aaKnown RBP20.03■□□□□ 0.8
SF3B2-211ENST00000531041 RANBP6O60518 1105 aaKnown RBP20.02■□□□□ 0.8
SF3B2-211ENST00000531041 GH2P01242 217 aa20.02■□□□□ 0.8
SF3B2-211ENST00000531041 TRDNQ13061 729 aa20.02■□□□□ 0.8
SF3B2-211ENST00000531041 RRP12Q5JTH9 1297 aaKnown RBP20.02■□□□□ 0.8
SF3B2-211ENST00000531041 STOX1Q6ZVD7 989 aa20.02■□□□□ 0.8
SF3B2-211ENST00000531041 TMEM179Q6ZVK1 233 aa20.02■□□□□ 0.8
SF3B2-211ENST00000531041 ESR2Q92731 530 aa20.02■□□□□ 0.8
SF3B2-211ENST00000531041 SLC10A4Q96EP9 437 aa20.02■□□□□ 0.8
SF3B2-211ENST00000531041 PLIN4Q96Q06 1357 aa20.02■□□□□ 0.8
SF3B2-211ENST00000531041 B4E1Z4 1266 aa20.02■□□□□ 0.79
SF3B2-211ENST00000531041 MPHOSPH10O00566 681 aaKnown RBP20.02■□□□□ 0.79
SF3B2-211ENST00000531041 TSPY3P0CV98 308 aa20.02■□□□□ 0.79
SF3B2-211ENST00000531041 TSPY8P0CW00 308 aa20.02■□□□□ 0.79
SF3B2-211ENST00000531041 TFAP4Q01664 338 aa20.02■□□□□ 0.79
SF3B2-211ENST00000531041 SHROOM1Q2M3G4 852 aaPredicted RBP20.02■□□□□ 0.79
SF3B2-211ENST00000531041 NEDD1Q8NHV4 660 aa20.02■□□□□ 0.79
SF3B2-211ENST00000531041 NCOA7Q8NI08 942 aa20.02■□□□□ 0.79
SF3B2-211ENST00000531041 SNX14Q9Y5W7 946 aa20.02■□□□□ 0.79
SF3B2-211ENST00000531041 TSPY2A6NKD2 308 aa20.01■□□□□ 0.79
SF3B2-211ENST00000531041 PTPRAP18433 802 aa20.01■□□□□ 0.79
SF3B2-211ENST00000531041 GUCY1A2P33402 732 aa20.01■□□□□ 0.79
SF3B2-211ENST00000531041 KRT32Q14532 448 aa20.01■□□□□ 0.79
SF3B2-211ENST00000531041 FAM47AQ5JRC9 791 aa20.01■□□□□ 0.79
SF3B2-211ENST00000531041 RGMBQ6NW40 437 aa20.01■□□□□ 0.79
SF3B2-211ENST00000531041 ERO1BQ86YB8 467 aa20.01■□□□□ 0.79
SF3B2-211ENST00000531041 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.01■□□□□ 0.79
SF3B2-211ENST00000531041 ELP3Q9H9T3 547 aa20.01■□□□□ 0.79
SF3B2-211ENST00000531041 SPDYE5A6NIY4 337 aa20■□□□□ 0.79
SF3B2-211ENST00000531041 USP17L5A8MUK1 530 aa20■□□□□ 0.79
SF3B2-211ENST00000531041 RALYLQ86SE5 291 aaKnown RBP20■□□□□ 0.79
SF3B2-211ENST00000531041 NKX2-3Q8TAU0 364 aa20■□□□□ 0.79
SF3B2-211ENST00000531041 TBC1D2Q9BYX2 928 aa20■□□□□ 0.79
SF3B2-211ENST00000531041 ZSWIM5Q9P217 1185 aa20■□□□□ 0.79
SF3B2-211ENST00000531041 IGKV6D-41A0A0C4DH26 115 aa19.99■□□□□ 0.79
SF3B2-211ENST00000531041 RASSF10A6NK89 507 aa19.99■□□□□ 0.79
SF3B2-211ENST00000531041 KDM4AO75164 1064 aa19.99■□□□□ 0.79
SF3B2-211ENST00000531041 HSPA6P17066 643 aa19.99■□□□□ 0.79
SF3B2-211ENST00000531041 ANAPC15P60006 121 aa19.99■□□□□ 0.79
SF3B2-211ENST00000531041 PPATQ06203 517 aa19.99■□□□□ 0.79
SF3B2-211ENST00000531041 SEPT2Q15019 361 aa19.99■□□□□ 0.79
SF3B2-211ENST00000531041 RAB3GAP1Q15042 981 aa19.99■□□□□ 0.79
SF3B2-211ENST00000531041 OPTNQ96CV9 577 aa19.99■□□□□ 0.79
SF3B2-211ENST00000531041 KANSL2Q9H9L4 492 aa19.99■□□□□ 0.79
SF3B2-211ENST00000531041 UPF2Q9HAU5 1272 aaKnown RBP19.99■□□□□ 0.79
SF3B2-211ENST00000531041 TCP11L1Q9NUJ3 509 aa19.99■□□□□ 0.79
SF3B2-211ENST00000531041 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.99■□□□□ 0.79
SF3B2-211ENST00000531041 ZNF157P51786 506 aaPredicted RBP19.98■□□□□ 0.79
SF3B2-211ENST00000531041 ADCK5Q3MIX3 580 aa19.98■□□□□ 0.79
SF3B2-211ENST00000531041 MB21D2Q8IYB1 491 aaPredicted RBP19.98■□□□□ 0.79
SF3B2-211ENST00000531041 NEK1Q96PY6 1258 aa19.98■□□□□ 0.79
SF3B2-211ENST00000531041 WDR18Q9BV38 432 aa19.98■□□□□ 0.79
SF3B2-211ENST00000531041 ZHX2Q9Y6X8 837 aa19.98■□□□□ 0.79
SF3B2-211ENST00000531041 DEFB115Q30KQ5 88 aa19.97■□□□□ 0.79
SF3B2-211ENST00000531041 IQCA1Q86XH1 822 aa19.97■□□□□ 0.79
SF3B2-211ENST00000531041 CNKSR2Q8WXI2 1034 aa19.97■□□□□ 0.79
SF3B2-211ENST00000531041 CCDC102AQ96A19 550 aa19.97■□□□□ 0.79
SF3B2-211ENST00000531041 IL17RAQ96F46 866 aa19.97■□□□□ 0.79
SF3B2-211ENST00000531041 WNK4Q96J92 1243 aa19.97■□□□□ 0.79
SF3B2-211ENST00000531041 AS3MTQ9HBK9 375 aa19.97■□□□□ 0.79
SF3B2-211ENST00000531041 IL17RBQ9NRM6 502 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms