RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 NEMFO60524 1076 aa15.05■□□□□ 0
RBM39-243ENST00000528062 LMNB1P20700 586 aa15.05■□□□□ 0
RBM39-243ENST00000528062 PODNQ7Z5L7 613 aa15.05■□□□□ 0
RBM39-243ENST00000528062 CEP57L1Q8IYX8 460 aa15.05■□□□□ 0
RBM39-243ENST00000528062 MXD3Q9BW11 206 aa15.05■□□□□ 0
RBM39-243ENST00000528062 GJB4Q9NTQ9 266 aa15.05■□□□□ 0
RBM39-243ENST00000528062 TRMT1Q9NXH9 659 aaKnown RBP15.05■□□□□ 0
RBM39-243ENST00000528062 EVCP57679 992 aa15.05■□□□□ -0
RBM39-243ENST00000528062 DPCR1Q3MIW9 517 aa15.05■□□□□ -0
RBM39-243ENST00000528062 CERS5Q8N5B7 392 aa15.05■□□□□ -0
RBM39-243ENST00000528062 LINC00301Q8NCQ3 95 aa15.05■□□□□ -0
RBM39-243ENST00000528062 PDS5AQ29RF7 1337 aaKnown RBP15.05■□□□□ -0
RBM39-243ENST00000528062 FAM205AQ6ZU69 1335 aa15.05■□□□□ -0
RBM39-243ENST00000528062 SEMA3EO15041 775 aa15.04■□□□□ -0
RBM39-243ENST00000528062 HAND2P61296 217 aa15.04■□□□□ -0
RBM39-243ENST00000528062 GTF2IP78347 998 aa15.04■□□□□ -0
RBM39-243ENST00000528062 ADALQ6DHV7 355 aa15.04■□□□□ -0
RBM39-243ENST00000528062 PIH1D3Q9NQM4 214 aaKnown RBP15.04■□□□□ -0
RBM39-243ENST00000528062 FZD9O00144 591 aa15.04■□□□□ -0
RBM39-243ENST00000528062 POLR3DP05423 398 aaPredicted RBP15.04■□□□□ -0
RBM39-243ENST00000528062 RAB11FIP4Q86YS3 637 aa15.04■□□□□ -0
RBM39-243ENST00000528062 CCAR2Q8N163 923 aaKnown RBP15.04■□□□□ -0
RBM39-243ENST00000528062 GNL3LQ9NVN8 582 aaKnown RBP15.04■□□□□ -0
RBM39-243ENST00000528062 DENND2AQ9ULE3 1009 aa15.04■□□□□ -0
RBM39-243ENST00000528062 ZNRF3Q9ULT6 936 aa15.04■□□□□ -0
RBM39-243ENST00000528062 A0A1W2PQ27 194 aa15.03■□□□□ -0
RBM39-243ENST00000528062 A0A1W2PQ64 194 aa15.03■□□□□ -0
RBM39-243ENST00000528062 A0A1W2PQD8 194 aa15.03■□□□□ -0
RBM39-243ENST00000528062 PTPN14Q15678 1187 aa15.03■□□□□ -0
RBM39-243ENST00000528062 DACT2Q5SW24 774 aa15.03■□□□□ -0
RBM39-243ENST00000528062 NIM1KQ8IY84 436 aa15.03■□□□□ -0
RBM39-243ENST00000528062 FBXL16Q8N461 479 aa15.03■□□□□ -0
RBM39-243ENST00000528062 ZNF384Q8TF68 577 aa15.03■□□□□ -0
RBM39-243ENST00000528062 FEZ1Q99689 392 aa15.03■□□□□ -0
RBM39-243ENST00000528062 SDF4Q9BRK5 362 aa15.03■□□□□ -0
RBM39-243ENST00000528062 ZNF215Q9UL58 517 aaPredicted RBP15.03■□□□□ -0
RBM39-243ENST00000528062 HPS5Q9UPZ3 1129 aa15.03■□□□□ -0
RBM39-243ENST00000528062 ZNF541Q9H0D2 1346 aa15.03■□□□□ -0
RBM39-243ENST00000528062 GRIN3BO60391 1043 aa15.03■□□□□ -0
RBM39-243ENST00000528062 RAD17O75943 681 aa15.03■□□□□ -0
RBM39-243ENST00000528062 CXCL9Q07325 125 aa15.03■□□□□ -0
RBM39-243ENST00000528062 MYH2Q9UKX2 1941 aa15.02■□□□□ -0
RBM39-243ENST00000528062 KIF28PB7ZC32 967 aa15.02■□□□□ -0
RBM39-243ENST00000528062 C9orf131Q5VYM1 1079 aa15.02■□□□□ -0
RBM39-243ENST00000528062 GTPBP4Q9BZE4 634 aaKnown RBP15.02■□□□□ -0
RBM39-243ENST00000528062 RNF181Q9P0P0 153 aa15.02■□□□□ -0
RBM39-243ENST00000528062 KIAA1468Q9P260 1216 aa15.02■□□□□ -0
RBM39-243ENST00000528062 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.02■□□□□ -08e-48■□□□□ 10.7
RBM39-243ENST00000528062 V9GYY5 206 aaPredicted RBP15.02■□□□□ -0
RBM39-243ENST00000528062 PRDX5P30044 214 aa15.02□□□□□ -0.01
RBM39-243ENST00000528062 ANTXR2P58335 489 aa15.02□□□□□ -0.01
RBM39-243ENST00000528062 TICAM2Q86XR7 235 aa15.02□□□□□ -0.01
RBM39-243ENST00000528062 OSBPL5Q9H0X9 879 aaPredicted RBP15.02□□□□□ -0.01
RBM39-243ENST00000528062 PSMD14O00487 310 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 IGSF3O75054 1194 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 STK38Q15208 465 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 STRIP1Q5VSL9 837 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 MB21D2Q8IYB1 491 aaPredicted RBP15.01□□□□□ -0.01
RBM39-243ENST00000528062 FBXO18Q8NFZ0 1043 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 C8orf76Q96K31 380 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 NAT10Q9H0A0 1025 aaKnown RBP15.01□□□□□ -0.01
RBM39-243ENST00000528062 OGFRQ9NZT2 677 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 CGNQ9P2M7 1197 aaKnown RBP15.01□□□□□ -0.01
RBM39-243ENST00000528062 KLF18A0A0U1RQI7 1052 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 G3V3G9 751 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 BIN1O00499 593 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 PRC1O43663 620 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 FGAP02671 866 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 DCAF8Q5TAQ9 597 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 MYSM1Q5VVJ2 828 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 JDP2Q8WYK2 163 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 XPO4Q9C0E2 1151 aaKnown RBP15.01□□□□□ -0.01
RBM39-243ENST00000528062 KCND1Q9NSA2 647 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 POLR3EQ9NVU0 708 aa15.01□□□□□ -0.01
RBM39-243ENST00000528062 DDX41Q9UJV9 622 aaKnown RBP15.01□□□□□ -0.01
RBM39-243ENST00000528062 USP17L3A6NCW0 530 aa15□□□□□ -0.01
RBM39-243ENST00000528062 USP17L4A6NCW7 530 aa15□□□□□ -0.01
RBM39-243ENST00000528062 GOLGA8BA8MQT2 603 aa15□□□□□ -0.01
RBM39-243ENST00000528062 SF3A1Q15459 793 aaKnown RBP15□□□□□ -0.01
RBM39-243ENST00000528062 MFSD14BQ5SR56 506 aa15□□□□□ -0.01
RBM39-243ENST00000528062 E4F1Q66K89 784 aaPredicted RBP15□□□□□ -0.01
RBM39-243ENST00000528062 ARMCX5Q6P1M9 558 aa15□□□□□ -0.01
RBM39-243ENST00000528062 USP17L1Q7RTZ2 530 aa15□□□□□ -0.01
RBM39-243ENST00000528062 ORC3Q9UBD5 711 aaPredicted RBP15□□□□□ -0.01
RBM39-243ENST00000528062 SPTLC2O15270 562 aa15□□□□□ -0.01
RBM39-243ENST00000528062 YEATS4O95619 227 aa15□□□□□ -0.01
RBM39-243ENST00000528062 VIL1P09327 827 aaKnown RBP15□□□□□ -0.01
RBM39-243ENST00000528062 NCAPHQ15003 741 aa15□□□□□ -0.01
RBM39-243ENST00000528062 TMEM132AQ24JP5 1023 aa15□□□□□ -0.01
RBM39-243ENST00000528062 AXDND1Q5T1B0 1012 aaPredicted RBP15□□□□□ -0.01
RBM39-243ENST00000528062 NKX2-3Q8TAU0 364 aa15□□□□□ -0.01
RBM39-243ENST00000528062 KCNG4Q8TDN1 519 aa15□□□□□ -0.01
RBM39-243ENST00000528062 PUS7LQ9H0K6 701 aaKnown RBP15□□□□□ -0.01
RBM39-243ENST00000528062 IFNKQ9P0W0 207 aa15□□□□□ -0.01
RBM39-243ENST00000528062 ZBTB12Q9Y330 459 aaPredicted RBP15□□□□□ -0.01
RBM39-243ENST00000528062 KMT5BQ4FZB7 885 aa14.99□□□□□ -0.01
RBM39-243ENST00000528062 WDR66Q8TBY9 1149 aa14.99□□□□□ -0.01
RBM39-243ENST00000528062 GMLQ99445 158 aa14.99□□□□□ -0.01
RBM39-243ENST00000528062 BPIFA3Q9BQP9 254 aa14.99□□□□□ -0.01
RBM39-243ENST00000528062 ABCF2Q9UG63 623 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms