RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 SSH3Q8TE77 659 aa13.1□□□□□ -0.31
VPS26B-203ENST00000525918 ZNF512BQ96KM6 892 aaPredicted RBP13.1□□□□□ -0.31
VPS26B-203ENST00000525918 TRIM34Q9BYJ4 488 aa13.1□□□□□ -0.31
VPS26B-203ENST00000525918 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.1□□□□□ -0.31
VPS26B-203ENST00000525918 HMX1Q9NP08 348 aaPredicted RBP13.1□□□□□ -0.31
VPS26B-203ENST00000525918 GINM1Q9NU53 330 aa13.1□□□□□ -0.31
VPS26B-203ENST00000525918 TMOD4Q9NZQ9 345 aa13.1□□□□□ -0.31
VPS26B-203ENST00000525918 MORF4L1Q9UBU8 362 aa13.1□□□□□ -0.31
VPS26B-203ENST00000525918 FLT1P17948 1338 aa13.1□□□□□ -0.31
VPS26B-203ENST00000525918 CYP2E1P05181 493 aaPredicted RBP13.09□□□□□ -0.31
VPS26B-203ENST00000525918 IRX3P78415 501 aaPredicted RBP13.09□□□□□ -0.31
VPS26B-203ENST00000525918 ATP8B2P98198 1209 aa13.09□□□□□ -0.31
VPS26B-203ENST00000525918 MTMR2Q13614 643 aa13.09□□□□□ -0.31
VPS26B-203ENST00000525918 ZKSCAN2Q63HK3 967 aa13.09□□□□□ -0.31
VPS26B-203ENST00000525918 MAPKAPK5Q8IW41 473 aa13.09□□□□□ -0.31
VPS26B-203ENST00000525918 CRACR2BQ8N4Y2 399 aaPredicted RBP13.09□□□□□ -0.31
VPS26B-203ENST00000525918 TMEM57Q8N5G2 664 aa13.09□□□□□ -0.31
VPS26B-203ENST00000525918 P2RX7Q99572 595 aaKnown RBP13.09□□□□□ -0.31
VPS26B-203ENST00000525918 DBNDD2Q9BQY9 259 aa13.09□□□□□ -0.31
VPS26B-203ENST00000525918 PALD1Q9ULE6 856 aa13.09□□□□□ -0.31
VPS26B-203ENST00000525918 USP17L10C9JJH3 530 aa13.08□□□□□ -0.32
VPS26B-203ENST00000525918 SURF6O75683 361 aaKnown RBP13.08□□□□□ -0.32
VPS26B-203ENST00000525918 ADGRA1Q86SQ6 560 aa13.08□□□□□ -0.32
VPS26B-203ENST00000525918 GPRC5AQ8NFJ5 357 aa13.08□□□□□ -0.32
VPS26B-203ENST00000525918 DNAJC18Q9H819 358 aa13.08□□□□□ -0.32
VPS26B-203ENST00000525918 DDX60LQ5H9U9 1706 aaKnown RBP13.08□□□□□ -0.32
VPS26B-203ENST00000525918 HLA-DOAP06340 250 aa13.07□□□□□ -0.32
VPS26B-203ENST00000525918 XRCC5P13010 732 aaKnown RBP13.07□□□□□ -0.32
VPS26B-203ENST00000525918 ZAP70P43403 619 aa13.07□□□□□ -0.32
VPS26B-203ENST00000525918 HERVK_113P62684 666 aa13.07□□□□□ -0.32
VPS26B-203ENST00000525918 JAG1P78504 1218 aa13.07□□□□□ -0.32
VPS26B-203ENST00000525918 CERS3Q8IU89 383 aa13.07□□□□□ -0.32
VPS26B-203ENST00000525918 NUDT12Q9BQG2 462 aa13.07□□□□□ -0.32
VPS26B-203ENST00000525918 NBPF3Q9H094 633 aa13.07□□□□□ -0.32
VPS26B-203ENST00000525918 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
VPS26B-203ENST00000525918 GDF11O95390 407 aa13.06□□□□□ -0.32
VPS26B-203ENST00000525918 CYP2B6P20813 491 aa13.06□□□□□ -0.32
VPS26B-203ENST00000525918 MAPK4P31152 587 aa13.06□□□□□ -0.32
VPS26B-203ENST00000525918 TRIM32Q13049 653 aa13.06□□□□□ -0.32
VPS26B-203ENST00000525918 DIS3LQ8TF46 1054 aaKnown RBP13.06□□□□□ -0.32
VPS26B-203ENST00000525918 GTF3C2Q8WUA4 911 aaPredicted RBP13.06□□□□□ -0.32
VPS26B-203ENST00000525918 SOCS4Q8WXH5 440 aa13.06□□□□□ -0.32
VPS26B-203ENST00000525918 TRIB2Q92519 343 aa13.06□□□□□ -0.32
VPS26B-203ENST00000525918 TXNRD2Q9NNW7 524 aa13.06□□□□□ -0.32
VPS26B-203ENST00000525918 RBPJLQ9UBG7 517 aa13.06□□□□□ -0.32
VPS26B-203ENST00000525918 STAP2Q9UGK3 403 aa13.06□□□□□ -0.32
VPS26B-203ENST00000525918 ZBTB21Q9ULJ3 1066 aa13.06□□□□□ -0.32
VPS26B-203ENST00000525918 NOP58Q9Y2X3 529 aaKnown RBP13.06□□□□□ -0.32
VPS26B-203ENST00000525918 CYP7A1P22680 504 aa13.05□□□□□ -0.32
VPS26B-203ENST00000525918 DYNLL1P63167 89 aaKnown RBP13.05□□□□□ -0.32
VPS26B-203ENST00000525918 PDE3AQ14432 1141 aa13.05□□□□□ -0.32
VPS26B-203ENST00000525918 SHROOM1Q2M3G4 852 aaPredicted RBP13.05□□□□□ -0.32
VPS26B-203ENST00000525918 MAP3K21Q5TCX8 1036 aa13.05□□□□□ -0.32
VPS26B-203ENST00000525918 CCAR1Q8IX12 1150 aaKnown RBP13.05□□□□□ -0.32
VPS26B-203ENST00000525918 TRMT44Q8IYL2 757 aaKnown RBP13.05□□□□□ -0.32
VPS26B-203ENST00000525918 PIH1D3Q9NQM4 214 aaKnown RBP13.05□□□□□ -0.32
VPS26B-203ENST00000525918 SAP30BPQ9UHR5 308 aaKnown RBP13.05□□□□□ -0.32
VPS26B-203ENST00000525918 DBNLQ9UJU6 430 aaKnown RBP13.05□□□□□ -0.32
VPS26B-203ENST00000525918 OGDHLQ9ULD0 1010 aa13.05□□□□□ -0.32
VPS26B-203ENST00000525918 PEX10O60683 326 aa13.04□□□□□ -0.32
VPS26B-203ENST00000525918 IDH1O75874 414 aaKnown RBP13.04□□□□□ -0.32
VPS26B-203ENST00000525918 PRKAR2AP13861 404 aaKnown RBP13.04□□□□□ -0.32
VPS26B-203ENST00000525918 BMP8BP34820 402 aa13.04□□□□□ -0.32
VPS26B-203ENST00000525918 MNX1P50219 401 aaPredicted RBP13.04□□□□□ -0.32
VPS26B-203ENST00000525918 ERVK-9P63128 1117 aa13.04□□□□□ -0.32
VPS26B-203ENST00000525918 ERVK-24P63145 666 aa13.04□□□□□ -0.32
VPS26B-203ENST00000525918 Q3C1V9 767 aa13.04□□□□□ -0.32
VPS26B-203ENST00000525918 TATDN1Q6P1N9 297 aa13.04□□□□□ -0.32
VPS26B-203ENST00000525918 TMED8Q6PL24 325 aaPredicted RBP13.04□□□□□ -0.32
VPS26B-203ENST00000525918 USP17L2Q6R6M4 530 aa13.04□□□□□ -0.32
VPS26B-203ENST00000525918 FTSJ3Q8IY81 847 aaKnown RBP13.04□□□□□ -0.32
VPS26B-203ENST00000525918 EAF2Q96CJ1 260 aaPredicted RBP13.04□□□□□ -0.32
VPS26B-203ENST00000525918 GDF15Q99988 308 aa13.04□□□□□ -0.32
VPS26B-203ENST00000525918 CCDC8Q9H0W5 538 aaPredicted RBP13.04□□□□□ -0.32
VPS26B-203ENST00000525918 C11orf49Q9H6J7 331 aa13.04□□□□□ -0.32
VPS26B-203ENST00000525918 C1orf115Q9H7X2 142 aa13.04□□□□□ -0.32
VPS26B-203ENST00000525918 EMILIN3Q9NT22 766 aa13.04□□□□□ -0.32
VPS26B-203ENST00000525918 GH2P01242 217 aa13.03□□□□□ -0.32
VPS26B-203ENST00000525918 RGS2P41220 211 aa13.03□□□□□ -0.32
VPS26B-203ENST00000525918 USP5P45974 858 aa13.03□□□□□ -0.32
VPS26B-203ENST00000525918 GPR142Q7Z601 462 aa13.03□□□□□ -0.32
VPS26B-203ENST00000525918 C7orf61Q8IZ16 206 aa13.03□□□□□ -0.32
VPS26B-203ENST00000525918 USP6NLQ92738 828 aa13.03□□□□□ -0.32
VPS26B-203ENST00000525918 PAGR1Q9BTK6 254 aa13.03□□□□□ -0.32
VPS26B-203ENST00000525918 EHD4Q9H223 541 aa13.03□□□□□ -0.32
VPS26B-203ENST00000525918 TLR7Q9NYK1 1049 aaKnown RBP13.03□□□□□ -0.32
VPS26B-203ENST00000525918 SERPINB13Q9UIV8 391 aa13.03□□□□□ -0.32
VPS26B-203ENST00000525918 FRMPD3Q5JV73 1810 aa13.02□□□□□ -0.32
VPS26B-203ENST00000525918 ZKSCAN1P17029 563 aaPredicted RBP13.02□□□□□ -0.33
VPS26B-203ENST00000525918 USP14P54578 494 aa13.02□□□□□ -0.33
VPS26B-203ENST00000525918 CACNB2Q08289 660 aaPredicted RBP13.02□□□□□ -0.33
VPS26B-203ENST00000525918 MAP3K12Q12852 859 aa13.02□□□□□ -0.33
VPS26B-203ENST00000525918 MORN1Q5T089 497 aa13.02□□□□□ -0.33
VPS26B-203ENST00000525918 PLEKHH3Q7Z736 793 aa13.02□□□□□ -0.33
VPS26B-203ENST00000525918 TTC6Q86TZ1 520 aa13.02□□□□□ -0.33
VPS26B-203ENST00000525918 ITPRIPQ8IWB1 547 aa13.02□□□□□ -0.33
VPS26B-203ENST00000525918 MAGEB6Q8N7X4 407 aa13.02□□□□□ -0.33
VPS26B-203ENST00000525918 MIGA1Q8NAN2 632 aa13.02□□□□□ -0.33
VPS26B-203ENST00000525918 C12orf42Q96LP6 360 aa13.02□□□□□ -0.33
VPS26B-203ENST00000525918 PORCNQ9H237 461 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms