RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 RNF186Q9NXI6 227 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 PPP4R2Q9NY27 417 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 TMOD4Q9NZQ9 345 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 ZBTB21Q9ULJ3 1066 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 KCNH4Q9UQ05 1017 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 CCDC171Q6TFL3 1326 aa6.44□□□□□ -1.38
HMGB1P40-201ENST00000525121 NAV1Q8NEY1 1877 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 AK9Q5TCS8 1911 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 A0A0D9SFI3 127 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 TESPA1A2RU30 521 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 CYP2D6P10635 497 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 HSPA8P11142 646 aaKnown RBP6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 LBX1P52954 281 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 USP14P54578 494 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 PDE4BQ07343 736 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 SPP2Q13103 211 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 TAF1CQ15572 869 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 PPP4R3BQ5MIZ7 849 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 TATDN1Q6P1N9 297 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 CTR9Q6PD62 1173 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 CWC27Q6UX04 472 aaKnown RBP6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 CCDC129Q6ZRS4 1044 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 TMEM179Q6ZVK1 233 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 C16orf86Q6ZW13 317 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 ANKRD23Q86SG2 305 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 IFNL3Q8IZI9 196 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 ZNF444Q8N0Y2 327 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 BRI3BPQ8WY22 251 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 FAM227BQ96M60 508 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 SEC62Q99442 399 aaKnown RBP6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 PARK7Q99497 189 aaKnown RBP6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 DNAJC18Q9H819 358 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 ARHGEF10LQ9HCE6 1279 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 PRDM10Q9NQV6 1147 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 TSKSQ9UJT2 592 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 PNMA3Q9UL41 463 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 AFG3L2Q9Y4W6 797 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 OTOFQ9HC10 1997 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 RAD50Q92878 1312 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 ROBO3Q96MS0 1386 aa6.43□□□□□ -1.38
HMGB1P40-201ENST00000525121 DDX60LQ5H9U9 1706 aaKnown RBP6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 FOCADQ5VW36 1801 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 CYP2D7A0A087X1C5 515 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 A0A0G2JLL6 359 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 C19orf81C9J6K1 198 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 BTBD19C9JJ37 291 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 USP17L10C9JJH3 530 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 PDHXO00330 501 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 IGF2BP3O00425 579 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 TBC1D8O95759 1140 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 SLURP2P0DP57 97 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 GSPT1P15170 499 aaKnown RBP6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 SHMT1P34896 483 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 CDK8P49336 464 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 BACE1P56817 501 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 IRX3P78415 501 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 ICA1Q05084 483 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 GABPAQ06546 454 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 PPARAQ07869 468 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 MTMR2Q13614 643 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 ARHGEF6Q15052 776 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 BMP2KLQ5H9B9 411 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 KIAA1211Q6ZU35 1233 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 PRRT2Q7Z6L0 340 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 STK11IPQ8N1F8 1099 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 PROCA1Q8NCQ7 364 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 SLC44A5Q8NCS7 719 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 SMCR8Q8TEV9 937 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 DYNLL2Q96FJ2 89 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 MS4A4AQ96JQ5 239 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 WDR18Q9BV38 432 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 CFHR5Q9BXR6 569 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 RNF41Q9H4P4 317 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 EPB41L4AQ9HCS5 686 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 TOMM22Q9NS69 142 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 CTNNA3Q9UI47 895 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 AGTPBP1Q9UPW5 1226 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 SLC45A1Q9Y2W3 748 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 DOCK1Q14185 1865 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 ZMYM6O95789 1325 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 MYH7P12883 1935 aa6.42□□□□□ -1.38
HMGB1P40-201ENST00000525121 MYO5AQ9Y4I1 1855 aaKnown RBP6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 FKTNO75072 461 aa6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 TSPY3P0CV98 308 aa6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 TSPY8P0CW00 308 aa6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 HSPD1P10809 573 aaKnown RBP6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 PCP11498 1178 aaKnown RBP6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 OSBPP22059 807 aa6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 HMGCS2P54868 508 aa6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 ATP2B2Q01814 1243 aa6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 CRHR2Q13324 411 aa6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 KIF22Q14807 665 aa6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 SEPT2Q15019 361 aa6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 ALX1Q15699 326 aa6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 ZYXQ15942 572 aaKnown RBP6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 IMMTQ16891 758 aaKnown RBP6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 NOM1Q5C9Z4 860 aaKnown RBP6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 USP17L2Q6R6M4 530 aa6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 ZNF589Q86UQ0 364 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P40-201ENST00000525121 CCDC84Q86UT8 332 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms