RNA–Protein interactions for RNA: ENST00000524086.5

MCM4-216, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 5

Gene MCM4, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-216ENST00000524086 CLASRPQ8N2M8 674 aaKnown RBP15.35■□□□□ 0.05
MCM4-216ENST00000524086 SHISA4Q96DD7 197 aa15.35■□□□□ 0.05
MCM4-216ENST00000524086 UNC93B1Q9H1C4 597 aa15.35■□□□□ 0.05
MCM4-216ENST00000524086 EHD4Q9H223 541 aa15.35■□□□□ 0.05
MCM4-216ENST00000524086 PIH1D3Q9NQM4 214 aaKnown RBP15.35■□□□□ 0.05
MCM4-216ENST00000524086 SERPINB13Q9UIV8 391 aa15.35■□□□□ 0.05
MCM4-216ENST00000524086 H0YGN5 161 aa15.34■□□□□ 0.05
MCM4-216ENST00000524086 HMGCRP04035 888 aa15.34■□□□□ 0.05
MCM4-216ENST00000524086 RLBP1P12271 317 aa15.34■□□□□ 0.05
MCM4-216ENST00000524086 MAPK4P31152 587 aa15.34■□□□□ 0.05
MCM4-216ENST00000524086 RRP1BQ14684 758 aaKnown RBP15.34■□□□□ 0.05
MCM4-216ENST00000524086 USP17L2Q6R6M4 530 aa15.34■□□□□ 0.05
MCM4-216ENST00000524086 ADGRA1Q86SQ6 560 aa15.34■□□□□ 0.05
MCM4-216ENST00000524086 AACSQ86V21 672 aa15.34■□□□□ 0.05
MCM4-216ENST00000524086 MAGEB6Q8N7X4 407 aa15.34■□□□□ 0.05
MCM4-216ENST00000524086 ANKLE1Q8NAG6 615 aa15.34■□□□□ 0.05
MCM4-216ENST00000524086 CABP5Q9NP86 173 aa15.34■□□□□ 0.05
MCM4-216ENST00000524086 PAK6Q9NQU5 681 aaPredicted RBP15.34■□□□□ 0.05
MCM4-216ENST00000524086 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.34■□□□□ 0.05
MCM4-216ENST00000524086 DDX19BQ9UMR2 479 aa15.34■□□□□ 0.05
MCM4-216ENST00000524086 XRCC5P13010 732 aaKnown RBP15.33■□□□□ 0.04
MCM4-216ENST00000524086 ELNP15502 786 aa15.33■□□□□ 0.04
MCM4-216ENST00000524086 PDE3AQ14432 1141 aa15.33■□□□□ 0.04
MCM4-216ENST00000524086 TATDN1Q6P1N9 297 aa15.33■□□□□ 0.04
MCM4-216ENST00000524086 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.33■□□□□ 0.04
MCM4-216ENST00000524086 SOCS4Q8WXH5 440 aa15.33■□□□□ 0.04
MCM4-216ENST00000524086 KIF1BPQ96EK5 621 aa15.33■□□□□ 0.04
MCM4-216ENST00000524086 DEFB118Q96PH6 123 aa15.33■□□□□ 0.04
MCM4-216ENST00000524086 P2RX7Q99572 595 aaKnown RBP15.33■□□□□ 0.04
MCM4-216ENST00000524086 NUDT12Q9BQG2 462 aa15.33■□□□□ 0.04
MCM4-216ENST00000524086 HMX1Q9NP08 348 aaPredicted RBP15.33■□□□□ 0.04
MCM4-216ENST00000524086 GJD2Q9UKL4 321 aa15.33■□□□□ 0.04
MCM4-216ENST00000524086 ZBTB21Q9ULJ3 1066 aa15.33■□□□□ 0.04
MCM4-216ENST00000524086 COLQQ9Y215 455 aaPredicted RBP15.33■□□□□ 0.04
MCM4-216ENST00000524086 RPTORQ8N122 1335 aa15.33■□□□□ 0.04
MCM4-216ENST00000524086 DOCK1Q14185 1865 aa15.33■□□□□ 0.04
MCM4-216ENST00000524086 RAB11FIP3O75154 756 aa15.32■□□□□ 0.04
MCM4-216ENST00000524086 GLRX3O76003 335 aaKnown RBP15.32■□□□□ 0.04
MCM4-216ENST00000524086 HERVK_113P62684 666 aa15.32■□□□□ 0.04
MCM4-216ENST00000524086 CCNA1P78396 465 aa15.32■□□□□ 0.04
MCM4-216ENST00000524086 RHPN1Q8TCX5 695 aa15.32■□□□□ 0.04
MCM4-216ENST00000524086 CRISPLD2Q9H0B8 497 aa15.32■□□□□ 0.04
MCM4-216ENST00000524086 SAP30BPQ9UHR5 308 aaKnown RBP15.32■□□□□ 0.04
MCM4-216ENST00000524086 EXOC6BQ9Y2D4 811 aa15.32■□□□□ 0.04
MCM4-216ENST00000524086 USP17L15C9J2P7 530 aa15.31■□□□□ 0.04
MCM4-216ENST00000524086 USP17L13C9JLJ4 530 aa15.31■□□□□ 0.04
MCM4-216ENST00000524086 USP17L11C9JVI0 530 aa15.31■□□□□ 0.04
MCM4-216ENST00000524086 USP17L18D6R9N7 530 aa15.31■□□□□ 0.04
MCM4-216ENST00000524086 USP17L22D6RA61 530 aa15.31■□□□□ 0.04
MCM4-216ENST00000524086 USP17L17D6RBQ6 530 aa15.31■□□□□ 0.04
MCM4-216ENST00000524086 USP17L19D6RCP7 530 aa15.31■□□□□ 0.04
MCM4-216ENST00000524086 USP17L20D6RJB6 530 aa15.31■□□□□ 0.04
MCM4-216ENST00000524086 EVI5O60447 810 aa15.31■□□□□ 0.04
MCM4-216ENST00000524086 IFIT2P09913 472 aaKnown RBP15.31■□□□□ 0.04
MCM4-216ENST00000524086 DYNLL1P63167 89 aaKnown RBP15.31■□□□□ 0.04
MCM4-216ENST00000524086 USP17L24Q0WX57 530 aa15.31■□□□□ 0.04
MCM4-216ENST00000524086 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
MCM4-216ENST00000524086 NECAB2Q7Z6G3 386 aa15.31■□□□□ 0.04
MCM4-216ENST00000524086 MIGA1Q8NAN2 632 aa15.31■□□□□ 0.04
MCM4-216ENST00000524086 CRNKL1Q9BZJ0 848 aaKnown RBP15.31■□□□□ 0.04
MCM4-216ENST00000524086 DNAJC18Q9H819 358 aa15.31■□□□□ 0.04
MCM4-216ENST00000524086 TLR7Q9NYK1 1049 aaKnown RBP15.31■□□□□ 0.04
MCM4-216ENST00000524086 MAGEB6P1A0A0J9YX57 407 aa15.3■□□□□ 0.04
MCM4-216ENST00000524086 GDF11O95390 407 aa15.3■□□□□ 0.04
MCM4-216ENST00000524086 GH2P01242 217 aa15.3■□□□□ 0.04
MCM4-216ENST00000524086 POLR3DP05423 398 aaPredicted RBP15.3■□□□□ 0.04
MCM4-216ENST00000524086 ABCB5Q2M3G0 1257 aa15.3■□□□□ 0.04
MCM4-216ENST00000524086 SLC9C2Q5TAH2 1124 aa15.3■□□□□ 0.04
MCM4-216ENST00000524086 PANK1Q8TE04 598 aa15.3■□□□□ 0.04
MCM4-216ENST00000524086 C12orf42Q96LP6 360 aa15.3■□□□□ 0.04
MCM4-216ENST00000524086 FEZ1Q99689 392 aa15.3■□□□□ 0.04
MCM4-216ENST00000524086 KIAA1683Q9H0B3 1180 aa15.3■□□□□ 0.04
MCM4-216ENST00000524086 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.3■□□□□ 0.04
MCM4-216ENST00000524086 RABGAP1Q9Y3P9 1069 aa15.3■□□□□ 0.04
MCM4-216ENST00000524086 FXR1P51114 621 aaKnown RBP eCLIP15.29■□□□□ 0.041e-6■■■□□ 16.6
MCM4-216ENST00000524086 ERVK-9P63128 1117 aa15.29■□□□□ 0.04
MCM4-216ENST00000524086 ERVK-24P63145 666 aa15.29■□□□□ 0.04
MCM4-216ENST00000524086 CWC22Q9HCG8 908 aaKnown RBP15.29■□□□□ 0.04
MCM4-216ENST00000524086 EMILIN3Q9NT22 766 aa15.29■□□□□ 0.04
MCM4-216ENST00000524086 RBPJLQ9UBG7 517 aa15.29■□□□□ 0.04
MCM4-216ENST00000524086 BRCA2P51587 3418 aa15.29■□□□□ 0.04
MCM4-216ENST00000524086 A0A1W2PPC1 479 aa15.28■□□□□ 0.04
MCM4-216ENST00000524086 RGS2P41220 211 aa15.28■□□□□ 0.04
MCM4-216ENST00000524086 RAB3GAP1Q15042 981 aa15.28■□□□□ 0.04
MCM4-216ENST00000524086 PLEKHH3Q7Z736 793 aa15.28■□□□□ 0.04
MCM4-216ENST00000524086 RIOK1Q9BRS2 568 aaKnown RBP15.28■□□□□ 0.04
MCM4-216ENST00000524086 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.28■□□□□ 0.042e-6■■■■□ 19.3
MCM4-216ENST00000524086 NBPF3Q9H094 633 aa15.28■□□□□ 0.04
MCM4-216ENST00000524086 ANTXR1Q9H6X2 564 aa15.28■□□□□ 0.04
MCM4-216ENST00000524086 IL1RAPL2Q9NP60 686 aa15.28■□□□□ 0.04
MCM4-216ENST00000524086 ZBTB40Q9NUA8 1239 aa15.28■□□□□ 0.04
MCM4-216ENST00000524086 CYP2B6P20813 491 aa15.27■□□□□ 0.04
MCM4-216ENST00000524086 JAG1P78504 1218 aa15.27■□□□□ 0.04
MCM4-216ENST00000524086 CHRDL2Q6WN34 429 aa15.27■□□□□ 0.04
MCM4-216ENST00000524086 LBX2Q6XYB7 198 aa15.27■□□□□ 0.04
MCM4-216ENST00000524086 CATSPERGQ6ZRH7 1159 aa15.27■□□□□ 0.04
MCM4-216ENST00000524086 AMOTL1Q8IY63 956 aa15.27■□□□□ 0.04
MCM4-216ENST00000524086 DDRGK1Q96HY6 314 aa15.27■□□□□ 0.04
MCM4-216ENST00000524086 PAWRQ96IZ0 340 aaKnown RBP15.27■□□□□ 0.04
MCM4-216ENST00000524086 HOXC10Q9NYD6 342 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms