RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 ISL2Q96A47 359 aa6.15□□□□□ -1.42
PCM1-220ENST00000523896 NT5C1AQ9BXI3 368 aa6.15□□□□□ -1.42
PCM1-220ENST00000523896 LRRC3Q9BY71 257 aa6.15□□□□□ -1.42
PCM1-220ENST00000523896 ADGRE2Q9UHX3 823 aa6.15□□□□□ -1.42
PCM1-220ENST00000523896 PCDHA4Q9UN74 947 aa6.15□□□□□ -1.42
PCM1-220ENST00000523896 INPP5FQ9Y2H2 1132 aa6.15□□□□□ -1.42
PCM1-220ENST00000523896 FAM221AA4D161 298 aa6.14□□□□□ -1.43
PCM1-220ENST00000523896 CILPO75339 1184 aa6.14□□□□□ -1.43
PCM1-220ENST00000523896 F13A1P00488 732 aa6.14□□□□□ -1.43
PCM1-220ENST00000523896 TNNI2P48788 182 aa6.14□□□□□ -1.43
PCM1-220ENST00000523896 PTPN11Q06124 597 aaPredicted RBP6.14□□□□□ -1.43
PCM1-220ENST00000523896 GNL2Q13823 731 aaKnown RBP6.14□□□□□ -1.43
PCM1-220ENST00000523896 DIEXFQ68CQ4 756 aaKnown RBP6.14□□□□□ -1.43
PCM1-220ENST00000523896 TOP6BLQ8N6T0 577 aa6.14□□□□□ -1.43
PCM1-220ENST00000523896 SLC43A3Q8NBI5 491 aa6.14□□□□□ -1.43
PCM1-220ENST00000523896 GPRASP2Q96D09 838 aa6.14□□□□□ -1.43
PCM1-220ENST00000523896 EAF1Q96JC9 268 aaPredicted RBP6.14□□□□□ -1.43
PCM1-220ENST00000523896 SPATA32Q96LK8 384 aa6.14□□□□□ -1.43
PCM1-220ENST00000523896 CAPN10Q9HC96 672 aa6.14□□□□□ -1.43
PCM1-220ENST00000523896 GTF2IRD1Q9UHL9 959 aa6.14□□□□□ -1.43
PCM1-220ENST00000523896 CSADQ9Y600 493 aa6.14□□□□□ -1.43
PCM1-220ENST00000523896 ROBO2Q9HCK4 1378 aa6.14□□□□□ -1.43
PCM1-220ENST00000523896 DCDC2CA8MYV0 355 aa6.13□□□□□ -1.43
PCM1-220ENST00000523896 FANCGO15287 622 aa6.13□□□□□ -1.43
PCM1-220ENST00000523896 NEFMP07197 916 aa6.13□□□□□ -1.43
PCM1-220ENST00000523896 MPP2Q14168 576 aa6.13□□□□□ -1.43
PCM1-220ENST00000523896 PPM1JQ5JR12 505 aa6.13□□□□□ -1.43
PCM1-220ENST00000523896 FAM181AQ8N9Y4 354 aa6.13□□□□□ -1.43
PCM1-220ENST00000523896 DUSP23Q9BVJ7 150 aa6.13□□□□□ -1.43
PCM1-220ENST00000523896 MKNK2Q9HBH9 465 aa6.13□□□□□ -1.43
PCM1-220ENST00000523896 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
PCM1-220ENST00000523896 BIN1O00499 593 aa6.12□□□□□ -1.43
PCM1-220ENST00000523896 BPNT1O95861 308 aa6.12□□□□□ -1.43
PCM1-220ENST00000523896 RPL6Q02878 288 aaKnown RBP6.12□□□□□ -1.43
PCM1-220ENST00000523896 APOBRQ0VD83 1088 aa6.12□□□□□ -1.43
PCM1-220ENST00000523896 IFI16Q16666 785 aaKnown RBP6.12□□□□□ -1.43
PCM1-220ENST00000523896 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.12□□□□□ -1.43
PCM1-220ENST00000523896 HDXQ7Z353 690 aa6.12□□□□□ -1.43
PCM1-220ENST00000523896 C12orf40Q86WS4 652 aa6.12□□□□□ -1.43
PCM1-220ENST00000523896 PLD6Q8N2A8 252 aaKnown RBP6.12□□□□□ -1.43
PCM1-220ENST00000523896 BCL7CQ8WUZ0 217 aaPredicted RBP6.12□□□□□ -1.43
PCM1-220ENST00000523896 JARID2Q92833 1246 aaPredicted RBP6.12□□□□□ -1.43
PCM1-220ENST00000523896 ASIC4Q96FT7 647 aa6.12□□□□□ -1.43
PCM1-220ENST00000523896 HRASLS5Q96KN8 279 aa6.12□□□□□ -1.43
PCM1-220ENST00000523896 PAK6Q9NQU5 681 aaPredicted RBP6.12□□□□□ -1.43
PCM1-220ENST00000523896 UBP1Q9NZI7 540 aa6.12□□□□□ -1.43
PCM1-220ENST00000523896 TMEM265A0A087WTH1 108 aa6.11□□□□□ -1.43
PCM1-220ENST00000523896 GNAT3A8MTJ3 354 aa6.11□□□□□ -1.43
PCM1-220ENST00000523896 LEFTY1O75610 366 aa6.11□□□□□ -1.43
PCM1-220ENST00000523896 CEACAM5P06731 702 aa6.11□□□□□ -1.43
PCM1-220ENST00000523896 JUNBP17275 347 aaPredicted RBP6.11□□□□□ -1.43
PCM1-220ENST00000523896 ITIH2P19823 946 aa6.11□□□□□ -1.43
PCM1-220ENST00000523896 CRKP46108 304 aa6.11□□□□□ -1.43
PCM1-220ENST00000523896 COL9A2Q14055 689 aaPredicted RBP6.11□□□□□ -1.43
PCM1-220ENST00000523896 LRFN4Q6PJG9 635 aa6.11□□□□□ -1.43
PCM1-220ENST00000523896 REC114Q7Z4M0 266 aa6.11□□□□□ -1.43
PCM1-220ENST00000523896 SLITRK4Q8IW52 837 aa6.11□□□□□ -1.43
PCM1-220ENST00000523896 ZNF507Q8TCN5 953 aa6.11□□□□□ -1.43
PCM1-220ENST00000523896 PRDM10Q9NQV6 1147 aa6.11□□□□□ -1.43
PCM1-220ENST00000523896 VAV3Q9UKW4 847 aa6.11□□□□□ -1.43
PCM1-220ENST00000523896 SNCAIPQ9Y6H5 919 aa6.11□□□□□ -1.43
PCM1-220ENST00000523896 PRAMEF27A3QJZ7 478 aa6.1□□□□□ -1.43
PCM1-220ENST00000523896 PRKCQQ04759 706 aa6.1□□□□□ -1.43
PCM1-220ENST00000523896 INPP5AQ14642 412 aa6.1□□□□□ -1.43
PCM1-220ENST00000523896 CWF19L2Q2TBE0 894 aaKnown RBP6.1□□□□□ -1.43
PCM1-220ENST00000523896 WIPI1Q5MNZ9 446 aaPredicted RBP6.1□□□□□ -1.43
PCM1-220ENST00000523896 FBXO27Q8NI29 283 aa6.1□□□□□ -1.43
PCM1-220ENST00000523896 NKD1Q969G9 470 aa6.1□□□□□ -1.43
PCM1-220ENST00000523896 PLPPR2Q96GM1 343 aa6.1□□□□□ -1.43
PCM1-220ENST00000523896 GMLQ99445 158 aa6.1□□□□□ -1.43
PCM1-220ENST00000523896 TACC3Q9Y6A5 838 aa6.1□□□□□ -1.43
PCM1-220ENST00000523896 GFRA2O00451 464 aa6.09□□□□□ -1.43
PCM1-220ENST00000523896 TLR3O15455 904 aaKnown RBP6.09□□□□□ -1.43
PCM1-220ENST00000523896 ATF4P18848 351 aaPredicted RBP6.09□□□□□ -1.43
PCM1-220ENST00000523896 SOX9P48436 509 aa6.09□□□□□ -1.43
PCM1-220ENST00000523896 CDK8P49336 464 aa6.09□□□□□ -1.43
PCM1-220ENST00000523896 ETF1P62495 437 aaKnown RBP6.09□□□□□ -1.43
PCM1-220ENST00000523896 RING1Q06587 406 aa6.09□□□□□ -1.43
PCM1-220ENST00000523896 AOC3Q16853 763 aa6.09□□□□□ -1.43
PCM1-220ENST00000523896 ZBTB37Q5TC79 503 aa6.09□□□□□ -1.43
PCM1-220ENST00000523896 ANGEL2Q5VTE6 544 aaKnown RBP6.09□□□□□ -1.43
PCM1-220ENST00000523896 ZNF574Q6ZN55 896 aaPredicted RBP6.09□□□□□ -1.43
PCM1-220ENST00000523896 CYFIP1Q7L576 1253 aa6.09□□□□□ -1.43
PCM1-220ENST00000523896 VPS37DQ86XT2 251 aa6.09□□□□□ -1.43
PCM1-220ENST00000523896 SEC16BQ96JE7 1060 aa6.09□□□□□ -1.43
PCM1-220ENST00000523896 FMNL2Q96PY5 1086 aa6.09□□□□□ -1.43
PCM1-220ENST00000523896 GOLGA2P5Q9HBQ8 144 aa6.09□□□□□ -1.43
PCM1-220ENST00000523896 ARID5AQ03989 594 aa6.08□□□□□ -1.44
PCM1-220ENST00000523896 BNIP3Q12983 259 aa6.08□□□□□ -1.44
PCM1-220ENST00000523896 SF3A1Q15459 793 aaKnown RBP6.08□□□□□ -1.44
PCM1-220ENST00000523896 ZNF792Q3KQV3 632 aa6.08□□□□□ -1.44
PCM1-220ENST00000523896 SEZ6Q53EL9 994 aa6.08□□□□□ -1.44
PCM1-220ENST00000523896 REXO1Q8N1G1 1221 aaKnown RBP6.08□□□□□ -1.44
PCM1-220ENST00000523896 PI4K2BQ8TCG2 481 aa6.08□□□□□ -1.44
PCM1-220ENST00000523896 SREK1Q8WXA9 508 aaKnown RBP6.08□□□□□ -1.44
PCM1-220ENST00000523896 ASB11Q8WXH4 323 aa6.08□□□□□ -1.44
PCM1-220ENST00000523896 PRDM5Q9NQX1 630 aaPredicted RBP6.08□□□□□ -1.44
PCM1-220ENST00000523896 POLR3KQ9Y2Y1 108 aaPredicted RBP6.08□□□□□ -1.44
PCM1-220ENST00000523896 SNX11Q9Y5W9 270 aa6.08□□□□□ -1.44
PCM1-220ENST00000523896 PRR36Q9H6K5 1346 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms