RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 ERVK-9P63128 1117 aa13.87□□□□□ -0.19
CTNNA1-234ENST00000522227 ERVK-24P63145 666 aa13.87□□□□□ -0.19
CTNNA1-234ENST00000522227 ATP2B2Q01814 1243 aa13.87□□□□□ -0.19
CTNNA1-234ENST00000522227 TFF2Q03403 129 aa13.87□□□□□ -0.19
CTNNA1-234ENST00000522227 TLE2Q04725 743 aa13.87□□□□□ -0.19
CTNNA1-234ENST00000522227 ADGRE1Q14246 886 aa13.87□□□□□ -0.19
CTNNA1-234ENST00000522227 RRP1BQ14684 758 aaKnown RBP13.87□□□□□ -0.19
CTNNA1-234ENST00000522227 TMEM31Q5JXX7 168 aa13.87□□□□□ -0.19
CTNNA1-234ENST00000522227 AKNAD1Q5T1N1 836 aa13.87□□□□□ -0.19
CTNNA1-234ENST00000522227 VGLL2Q8N8G2 317 aa13.87□□□□□ -0.19
CTNNA1-234ENST00000522227 TRPV1Q8NER1 839 aa13.87□□□□□ -0.19
CTNNA1-234ENST00000522227 IDI2Q9BXS1 227 aa13.87□□□□□ -0.19
CTNNA1-234ENST00000522227 TMOD4Q9NZQ9 345 aa13.87□□□□□ -0.19
CTNNA1-234ENST00000522227 MYO9BQ13459 2157 aa13.86□□□□□ -0.19
CTNNA1-234ENST00000522227 KCNQ1P51787 676 aa13.86□□□□□ -0.19
CTNNA1-234ENST00000522227 RALBP1Q15311 655 aa13.86□□□□□ -0.19
CTNNA1-234ENST00000522227 SLC4A10Q6U841 1118 aa13.86□□□□□ -0.19
CTNNA1-234ENST00000522227 ARRDC4Q8NCT1 418 aa13.86□□□□□ -0.19
CTNNA1-234ENST00000522227 NCOR1O75376 2440 aa13.86□□□□□ -0.19
CTNNA1-234ENST00000522227 RLFQ13129 1914 aa13.86□□□□□ -0.19
CTNNA1-234ENST00000522227 MYH13Q9UKX3 1938 aa13.86□□□□□ -0.19
CTNNA1-234ENST00000522227 MSCO60682 206 aa13.85□□□□□ -0.19
CTNNA1-234ENST00000522227 BMP1P13497 986 aa13.85□□□□□ -0.19
CTNNA1-234ENST00000522227 RAG1P15918 1043 aa13.85□□□□□ -0.19
CTNNA1-234ENST00000522227 FPGSQ05932 587 aa13.85□□□□□ -0.19
CTNNA1-234ENST00000522227 PUM3Q15397 648 aaKnown RBP13.85□□□□□ -0.19
CTNNA1-234ENST00000522227 SH3D19Q5HYK7 790 aa13.85□□□□□ -0.19
CTNNA1-234ENST00000522227 NPLOC4Q8TAT6 608 aa13.85□□□□□ -0.19
CTNNA1-234ENST00000522227 OSBPL5Q9H0X9 879 aaPredicted RBP13.85□□□□□ -0.19
CTNNA1-234ENST00000522227 ARIH1Q9Y4X5 557 aaPredicted RBP13.85□□□□□ -0.19
CTNNA1-234ENST00000522227 BDP1A6H8Y1 2624 aa13.84□□□□□ -0.19
CTNNA1-234ENST00000522227 SLC5A1P13866 664 aa13.84□□□□□ -0.19
CTNNA1-234ENST00000522227 CAP2P40123 477 aa13.84□□□□□ -0.19
CTNNA1-234ENST00000522227 BTDP43251 543 aa13.84□□□□□ -0.19
CTNNA1-234ENST00000522227 SKIV2LQ15477 1246 aaKnown RBP13.84□□□□□ -0.19
CTNNA1-234ENST00000522227 KAZALD1Q96I82 304 aa13.84□□□□□ -0.19
CTNNA1-234ENST00000522227 BICC1Q9H694 974 aaKnown RBP13.84□□□□□ -0.19
CTNNA1-234ENST00000522227 AS3MTQ9HBK9 375 aa13.84□□□□□ -0.19
CTNNA1-234ENST00000522227 UTYO14607 1347 aa13.84□□□□□ -0.19
CTNNA1-234ENST00000522227 CLTBP09497 229 aa13.83□□□□□ -0.2
CTNNA1-234ENST00000522227 FGFR2P21802 821 aa13.83□□□□□ -0.2
CTNNA1-234ENST00000522227 DZIP1Q86YF9 867 aaKnown RBP13.83□□□□□ -0.2
CTNNA1-234ENST00000522227 PBX4Q9BYU1 374 aa13.83□□□□□ -0.2
CTNNA1-234ENST00000522227 TSPYL2Q9H2G4 693 aaPredicted RBP13.83□□□□□ -0.2
CTNNA1-234ENST00000522227 TACC3Q9Y6A5 838 aa13.83□□□□□ -0.2
CTNNA1-234ENST00000522227 MYBBP1AQ9BQG0 1328 aaKnown RBP13.83□□□□□ -0.2
CTNNA1-234ENST00000522227 ATAD5Q96QE3 1844 aa13.83□□□□□ -0.2
CTNNA1-234ENST00000522227 RFX7Q2KHR2 1363 aa13.83□□□□□ -0.2
CTNNA1-234ENST00000522227 MYH2Q9UKX2 1941 aa13.82□□□□□ -0.2
CTNNA1-234ENST00000522227 PQBP1O60828 265 aaKnown RBP13.82□□□□□ -0.2
CTNNA1-234ENST00000522227 HOXA7P31268 230 aaPredicted RBP13.82□□□□□ -0.2
CTNNA1-234ENST00000522227 MRE11P49959 708 aa13.82□□□□□ -0.2
CTNNA1-234ENST00000522227 SNX17Q15036 470 aa13.82□□□□□ -0.2
CTNNA1-234ENST00000522227 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.82□□□□□ -0.25e-13■■□□□ 13.1
CTNNA1-234ENST00000522227 TMEM39AQ9NV64 488 aa13.82□□□□□ -0.2
CTNNA1-234ENST00000522227 PLXNA1Q9UIW2 1896 aa13.82□□□□□ -0.2
CTNNA1-234ENST00000522227 TBC1D12O60347 775 aa13.81□□□□□ -0.2
CTNNA1-234ENST00000522227 GLRX3O76003 335 aaKnown RBP13.81□□□□□ -0.2
CTNNA1-234ENST00000522227 NBPF7P0C2Y1 421 aaPredicted RBP13.81□□□□□ -0.2
CTNNA1-234ENST00000522227 CYBAP13498 195 aa13.81□□□□□ -0.2
CTNNA1-234ENST00000522227 BACE1P56817 501 aa13.81□□□□□ -0.2
CTNNA1-234ENST00000522227 SHROOM1Q2M3G4 852 aaPredicted RBP13.81□□□□□ -0.2
CTNNA1-234ENST00000522227 PRAMEF19Q5SWL8 479 aa13.81□□□□□ -0.2
CTNNA1-234ENST00000522227 KHSRPQ92945 711 aaKnown RBP eCLIP13.81□□□□□ -0.2
CTNNA1-234ENST00000522227 TBC1D2Q9BYX2 928 aa13.81□□□□□ -0.2
CTNNA1-234ENST00000522227 NKX2-4Q9H2Z4 354 aa13.81□□□□□ -0.2
CTNNA1-234ENST00000522227 CXXC1Q9P0U4 656 aaPredicted RBP13.81□□□□□ -0.2
CTNNA1-234ENST00000522227 ABCF2Q9UG63 623 aa13.81□□□□□ -0.2
CTNNA1-234ENST00000522227 IVNS1ABPQ9Y6Y0 642 aa13.81□□□□□ -0.2
CTNNA1-234ENST00000522227 SLC15A5A6NIM6 579 aa13.8□□□□□ -0.2
CTNNA1-234ENST00000522227 PTPREP23469 700 aa13.8□□□□□ -0.2
CTNNA1-234ENST00000522227 JAG1P78504 1218 aa13.8□□□□□ -0.2
CTNNA1-234ENST00000522227 LRRC41Q15345 812 aa13.8□□□□□ -0.2
CTNNA1-234ENST00000522227 ZYXQ15942 572 aaKnown RBP13.8□□□□□ -0.2
CTNNA1-234ENST00000522227 LPIN2Q92539 896 aa13.8□□□□□ -0.2
CTNNA1-234ENST00000522227 SRCIN1Q9C0H9 1055 aa13.8□□□□□ -0.2
CTNNA1-234ENST00000522227 GAKO14976 1311 aa13.8□□□□□ -0.2
CTNNA1-234ENST00000522227 MUC6Q6W4X9 2439 aa13.8□□□□□ -0.2
CTNNA1-234ENST00000522227 CNMDO75829 334 aa13.79□□□□□ -0.2
CTNNA1-234ENST00000522227 PHKA1P46020 1223 aa13.79□□□□□ -0.2
CTNNA1-234ENST00000522227 FAM47AQ5JRC9 791 aa13.79□□□□□ -0.2
CTNNA1-234ENST00000522227 ANKRD44Q8N8A2 993 aa13.79□□□□□ -0.2
CTNNA1-234ENST00000522227 WDR18Q9BV38 432 aa13.79□□□□□ -0.2
CTNNA1-234ENST00000522227 C11orf16Q9NQ32 467 aa13.79□□□□□ -0.2
CTNNA1-234ENST00000522227 GNL3LQ9NVN8 582 aaKnown RBP13.79□□□□□ -0.2
CTNNA1-234ENST00000522227 KIF16BQ96L93 1317 aa13.79□□□□□ -0.2
CTNNA1-234ENST00000522227 PIEZO1Q92508 2521 aa13.79□□□□□ -0.2
CTNNA1-234ENST00000522227 USP17L10C9JJH3 530 aa13.78□□□□□ -0.2
CTNNA1-234ENST00000522227 KIAA0355O15063 1070 aa13.78□□□□□ -0.2
CTNNA1-234ENST00000522227 ALDH1L1O75891 902 aa13.78□□□□□ -0.2
CTNNA1-234ENST00000522227 GDF11O95390 407 aa13.78□□□□□ -0.2
CTNNA1-234ENST00000522227 ACRP10323 421 aa13.78□□□□□ -0.2
CTNNA1-234ENST00000522227 CCNA1P78396 465 aa13.78□□□□□ -0.2
CTNNA1-234ENST00000522227 DPP9Q86TI2 863 aa13.78□□□□□ -0.2
CTNNA1-234ENST00000522227 MSRAQ9UJ68 235 aa13.78□□□□□ -0.2
CTNNA1-234ENST00000522227 DENND2AQ9ULE3 1009 aa13.78□□□□□ -0.2
CTNNA1-234ENST00000522227 APBB1O00213 710 aa13.77□□□□□ -0.21
CTNNA1-234ENST00000522227 AAK1Q2M2I8 961 aa13.77□□□□□ -0.21
CTNNA1-234ENST00000522227 SLC44A5Q8NCS7 719 aa13.77□□□□□ -0.21
CTNNA1-234ENST00000522227 GTF3C2Q8WUA4 911 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms