RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 ME1P48163 572 aa21.42■■□□□ 1.02
TRAPPC9-210ENST00000521667 GNL2Q13823 731 aaKnown RBP21.42■■□□□ 1.02
TRAPPC9-210ENST00000521667 STYK1Q6J9G0 422 aa21.42■■□□□ 1.02
TRAPPC9-210ENST00000521667 CCDC125Q86Z20 511 aa21.42■■□□□ 1.02
TRAPPC9-210ENST00000521667 TEX11Q8IYF3 940 aa21.42■■□□□ 1.02
TRAPPC9-210ENST00000521667 CMTR1Q8N1G2 835 aaKnown RBP21.42■■□□□ 1.02
TRAPPC9-210ENST00000521667 CCDC82Q8N4S0 544 aa21.42■■□□□ 1.02
TRAPPC9-210ENST00000521667 RNF26Q9BY78 433 aaPredicted RBP21.42■■□□□ 1.02
TRAPPC9-210ENST00000521667 CLIC4Q9Y696 253 aa21.42■■□□□ 1.02
TRAPPC9-210ENST00000521667 DLEC1Q9Y238 1755 aa21.42■■□□□ 1.02
TRAPPC9-210ENST00000521667 ECM29Q5VYK3 1845 aa21.42■■□□□ 1.02
TRAPPC9-210ENST00000521667 MYH2Q9UKX2 1941 aa21.41■■□□□ 1.02
TRAPPC9-210ENST00000521667 NMT2O60551 498 aa21.41■■□□□ 1.02
TRAPPC9-210ENST00000521667 U2AF2P26368 475 aaKnown RBP eCLIP21.41■■□□□ 1.02
TRAPPC9-210ENST00000521667 MAP3K11Q16584 847 aa21.41■■□□□ 1.02
TRAPPC9-210ENST00000521667 KCNG4Q8TDN1 519 aa21.41■■□□□ 1.02
TRAPPC9-210ENST00000521667 DYNLL2Q96FJ2 89 aa21.41■■□□□ 1.02
TRAPPC9-210ENST00000521667 PPP1R9BQ96SB3 815 aa21.41■■□□□ 1.02
TRAPPC9-210ENST00000521667 EYA3Q99504 573 aa21.41■■□□□ 1.02
TRAPPC9-210ENST00000521667 CLSTN2Q9H4D0 955 aa21.41■■□□□ 1.02
TRAPPC9-210ENST00000521667 TAOK2Q9UL54 1235 aa21.41■■□□□ 1.02
TRAPPC9-210ENST00000521667 RHBDL3P58872 404 aa21.41■■□□□ 1.02
TRAPPC9-210ENST00000521667 STK38Q15208 465 aa21.41■■□□□ 1.02
TRAPPC9-210ENST00000521667 CCAR1Q8IX12 1150 aaKnown RBP21.41■■□□□ 1.02
TRAPPC9-210ENST00000521667 TNMDQ9H2S6 317 aa21.41■■□□□ 1.02
TRAPPC9-210ENST00000521667 GOLGB1Q14789 3259 aaKnown RBP21.4■■□□□ 1.02
TRAPPC9-210ENST00000521667 CHRNA5P30532 468 aa21.4■■□□□ 1.02
TRAPPC9-210ENST00000521667 TFAP4Q01664 338 aa21.4■■□□□ 1.02
TRAPPC9-210ENST00000521667 CAMK4Q16566 473 aa21.4■■□□□ 1.02
TRAPPC9-210ENST00000521667 FBXW7Q969H0 707 aa21.4■■□□□ 1.02
TRAPPC9-210ENST00000521667 MKNK2Q9HBH9 465 aa21.4■■□□□ 1.02
TRAPPC9-210ENST00000521667 SAP30BPQ9UHR5 308 aaKnown RBP21.4■■□□□ 1.02
TRAPPC9-210ENST00000521667 NAV1Q8NEY1 1877 aa21.4■■□□□ 1.02
TRAPPC9-210ENST00000521667 DOK7Q18PE1 504 aa21.39■■□□□ 1.02
TRAPPC9-210ENST00000521667 ANO1Q5XXA6 986 aa21.39■■□□□ 1.02
TRAPPC9-210ENST00000521667 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.39■■□□□ 1.02
TRAPPC9-210ENST00000521667 PCDHA7Q9UN72 937 aa21.39■■□□□ 1.02
TRAPPC9-210ENST00000521667 MMP1P03956 469 aa21.39■■□□□ 1.01
TRAPPC9-210ENST00000521667 PLCD1P51178 756 aa21.39■■□□□ 1.01
TRAPPC9-210ENST00000521667 AKAP17AQ02040 695 aaKnown RBP21.39■■□□□ 1.01
TRAPPC9-210ENST00000521667 FUT2Q10981 343 aa21.39■■□□□ 1.01
TRAPPC9-210ENST00000521667 SAFBQ15424 915 aaKnown RBP eCLIP21.39■■□□□ 1.01
TRAPPC9-210ENST00000521667 SF3A1Q15459 793 aaKnown RBP21.39■■□□□ 1.01
TRAPPC9-210ENST00000521667 DAGLAQ9Y4D2 1042 aa21.39■■□□□ 1.01
TRAPPC9-210ENST00000521667 FLT1P17948 1338 aa21.39■■□□□ 1.01
TRAPPC9-210ENST00000521667 G3V3G9 751 aa21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 SPTLC2O15270 562 aa21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 DCAF8Q5TAQ9 597 aa21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 ADALQ6DHV7 355 aa21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 CCDC73Q6ZRK6 1079 aa21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 RBM43Q6ZSC3 357 aaKnown RBP21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 CERS5Q8N5B7 392 aa21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 CCDC192P0DO97 292 aa21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 CCDC178Q5BJE1 867 aa21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 RCSD1Q6JBY9 416 aa21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 TMTC3Q6ZXV5 915 aa21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 DGKHQ86XP1 1220 aa21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 CTCFLQ8NI51 663 aaPredicted RBP21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 GOLPH3LQ9H4A5 285 aa21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 ZNF287Q9HBT7 754 aa21.38■■□□□ 1.01
TRAPPC9-210ENST00000521667 A0A1W2PQ27 194 aa21.37■■□□□ 1.01
TRAPPC9-210ENST00000521667 A0A1W2PQ64 194 aa21.37■■□□□ 1.01
TRAPPC9-210ENST00000521667 A0A1W2PQD8 194 aa21.37■■□□□ 1.01
TRAPPC9-210ENST00000521667 PRPF3O43395 683 aaKnown RBP21.37■■□□□ 1.01
TRAPPC9-210ENST00000521667 PLEKHA8P1O95397 391 aa21.37■■□□□ 1.01
TRAPPC9-210ENST00000521667 ZNF444Q8N0Y2 327 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC9-210ENST00000521667 UVSSAQ2YD98 709 aa21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 DIS3L2Q8IYB7 885 aaKnown RBP21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 FSIP1Q8NA03 581 aa21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 ANKS1AQ92625 1134 aa21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 IL17RBQ9NRM6 502 aa21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 TCP11L1Q9NUJ3 509 aa21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 KCNJ14Q9UNX9 436 aa21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 ZBTB7AO95365 584 aa21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 TSPY3P0CV98 308 aa21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 TSPY8P0CW00 308 aa21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 FAM160A1Q05DH4 1040 aa21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 NOSTRINQ8IVI9 506 aa21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 SLC44A5Q8NCS7 719 aa21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 MRPS27Q92552 414 aaKnown RBP21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 CNKSR1Q969H4 720 aa21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 FOXP1Q9H334 677 aaPredicted RBP21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 KAT14Q9H8E8 782 aa21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 TTF2Q9UNY4 1162 aaKnown RBP21.36■■□□□ 1.01
TRAPPC9-210ENST00000521667 DDX60LQ5H9U9 1706 aaKnown RBP21.35■■□□□ 1.01
TRAPPC9-210ENST00000521667 BTBD18B2RXH4 712 aa21.35■■□□□ 1.01
TRAPPC9-210ENST00000521667 F8W031 263 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC9-210ENST00000521667 XBP1P17861 261 aa21.35■■□□□ 1.01
TRAPPC9-210ENST00000521667 SNW1Q13573 536 aaKnown RBP21.35■■□□□ 1.01
TRAPPC9-210ENST00000521667 SLC39A14Q15043 492 aa21.35■■□□□ 1.01
TRAPPC9-210ENST00000521667 PKN1Q16512 942 aa21.35■■□□□ 1.01
TRAPPC9-210ENST00000521667 C16orf86Q6ZW13 317 aa21.35■■□□□ 1.01
TRAPPC9-210ENST00000521667 PODNQ7Z5L7 613 aa21.35■■□□□ 1.01
TRAPPC9-210ENST00000521667 CKAP2LQ8IYA6 745 aa21.35■■□□□ 1.01
TRAPPC9-210ENST00000521667 ENGASEQ8NFI3 743 aa21.35■■□□□ 1.01
TRAPPC9-210ENST00000521667 RASA1P20936 1047 aa21.34■■□□□ 1.01
TRAPPC9-210ENST00000521667 ZNF219Q9P2Y4 722 aaPredicted RBP21.34■■□□□ 1.01
TRAPPC9-210ENST00000521667 V9GY48 417 aaPredicted RBP21.34■■□□□ 1.01
TRAPPC9-210ENST00000521667 PDLIM2Q96JY6 352 aa21.34■■□□□ 1.01
TRAPPC9-210ENST00000521667 MXD3Q9BW11 206 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms