RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 REM2Q8IYK8 340 aaPredicted RBP7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 ZNF444Q8N0Y2 327 aaPredicted RBP7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 NEDD1Q8NHV4 660 aa7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 ESR2Q92731 530 aa7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 CCDC102AQ96A19 550 aa7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 BACH2Q9BYV9 841 aa7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 MKNK2Q9HBH9 465 aa7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 CABP5Q9NP86 173 aa7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 ANGEL1Q9UNK9 670 aaKnown RBP7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 CSADQ9Y600 493 aa7.54□□□□□ -1.2
IGHV4-55-201ENST00000520889 SPDYE5A6NIY4 337 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 RASSF10A6NK89 507 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 SLC27A2O14975 620 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 ZBTB48P10074 688 aaPredicted RBP7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 CYP2D6P10635 497 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 RASA1P20936 1047 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 PPATQ06203 517 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 ABCB5Q2M3G0 1257 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 PRAMEF18Q5VWM3 479 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 CREB3L3Q68CJ9 461 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 MIGA2Q7L4E1 593 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 SAPCD2Q86UD0 394 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 ERO1BQ86YB8 467 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 FBXL16Q8N461 479 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 NCOA7Q8NI08 942 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 TTC14Q96N46 770 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 WRNIP1Q96S55 665 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 WDR18Q9BV38 432 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 TM6SF1Q9BZW5 370 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 NBPF3Q9H094 633 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 KANSL2Q9H9L4 492 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 UPF2Q9HAU5 1272 aaKnown RBP7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 AS3MTQ9HBK9 375 aa7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 SCAF8Q9UPN6 1271 aaKnown RBP7.53□□□□□ -1.2
IGHV4-55-201ENST00000520889 THSD7BQ9C0I4 1608 aa7.52□□□□□ -1.2
IGHV4-55-201ENST00000520889 LOC285556D6RIA3 1793 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 CYP2D7A0A087X1C5 515 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 IGKV6D-41A0A0C4DH26 115 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 C19orf81C9J6K1 198 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 E7EWF7 191 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 CXCL11O14625 94 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 PSMA5P28066 241 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 RBM25P49756 843 aaKnown RBP7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 HUNKP57058 714 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 C1QTNF8P60827 252 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 CTDSPL2Q05D32 466 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 PPIL2Q13356 520 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 VGLL4Q14135 290 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 TTLL12Q14166 644 aaPredicted RBP7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 RGMBQ6NW40 437 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 IQCA1Q86XH1 822 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 DGKHQ86XP1 1220 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 TBC1D10CQ8IV04 446 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 ANKS1AQ92625 1134 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 MKL1Q969V6 931 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 DYNLL2Q96FJ2 89 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 SH2D4AQ9H788 454 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 PICK1Q9NRD5 415 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 NYAP2Q9P242 653 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 ZBTB21Q9ULJ3 1066 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 KCNH4Q9UQ05 1017 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 SNCAIPQ9Y6H5 919 aa7.52□□□□□ -1.21
IGHV4-55-201ENST00000520889 TSPY2A6NKD2 308 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 USP17L5A8MUK1 530 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 UBE2Q2LH0YL09 131 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 TSPY3P0CV98 308 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 TSPY8P0CW00 308 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 HSPA6P17066 643 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 PTPRAP18433 802 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 INPP5BP32019 993 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 GUCY1A2P33402 732 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 MCM5P33992 734 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 ECE1P42892 770 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 USP14P54578 494 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 INHBEP58166 350 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 HAND2P61296 217 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 TFAP4Q01664 338 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 RRP1BQ14684 758 aaKnown RBP7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 DEFB115Q30KQ5 88 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 SH3D19Q5HYK7 790 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 DLK2Q6UY11 383 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 RALYLQ86SE5 291 aaKnown RBP7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 MB21D2Q8IYB1 491 aaPredicted RBP7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 TMTC2Q8N394 836 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 SLC10A4Q96EP9 437 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 TMEM87BQ96K49 555 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 NEK1Q96PY6 1258 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 ALDH8A1Q9H2A2 487 aaPredicted RBP7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 ZNF408Q9H9D4 720 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 ZCCHC17Q9NP64 241 aaKnown RBP7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 ZSWIM5Q9P217 1185 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 AFG3L2Q9Y4W6 797 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 SNX14Q9Y5W7 946 aa7.51□□□□□ -1.21
IGHV4-55-201ENST00000520889 TESPA1A2RU30 521 aaPredicted RBP7.5□□□□□ -1.21
IGHV4-55-201ENST00000520889 FAM196BA6NMK8 535 aa7.5□□□□□ -1.21
IGHV4-55-201ENST00000520889 SMIM22K7EJ46 135 aa7.5□□□□□ -1.21
IGHV4-55-201ENST00000520889 RANBP6O60518 1105 aaKnown RBP7.5□□□□□ -1.21
IGHV4-55-201ENST00000520889 SEC24BO95487 1268 aa7.5□□□□□ -1.21
IGHV4-55-201ENST00000520889 TTLL1O95922 423 aa7.5□□□□□ -1.21
IGHV4-55-201ENST00000520889 GH2P01242 217 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms