RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 PLCG2P16885 1265 aa22.06■■□□□ 1.12
TFF3-204ENST00000518498 FOXP4Q8IVH2 680 aaPredicted RBP22.06■■□□□ 1.12
TFF3-204ENST00000518498 WDR18Q9BV38 432 aa22.06■■□□□ 1.12
TFF3-204ENST00000518498 GPR108Q9NPR9 543 aa22.06■■□□□ 1.12
TFF3-204ENST00000518498 ZBTB47Q9UFB7 747 aaPredicted RBP22.06■■□□□ 1.12
TFF3-204ENST00000518498 RAB11FIP3O75154 756 aa22.05■■□□□ 1.12
TFF3-204ENST00000518498 PPP4CP60510 307 aa22.05■■□□□ 1.12
TFF3-204ENST00000518498 TGFBRAP1Q8WUH2 860 aa22.05■■□□□ 1.12
TFF3-204ENST00000518498 PRO3102Q9H379 93 aa22.05■■□□□ 1.12
TFF3-204ENST00000518498 GJD2Q9UKL4 321 aa22.05■■□□□ 1.12
TFF3-204ENST00000518498 NOP58Q9Y2X3 529 aaKnown RBP22.05■■□□□ 1.12
TFF3-204ENST00000518498 SURF6O75683 361 aaKnown RBP22.04■■□□□ 1.12
TFF3-204ENST00000518498 ASNSP08243 561 aa22.04■■□□□ 1.12
TFF3-204ENST00000518498 TNNI3KQ59H18 835 aa22.04■■□□□ 1.12
TFF3-204ENST00000518498 ERC1Q8IUD2 1116 aa22.04■■□□□ 1.12
TFF3-204ENST00000518498 PAWRQ96IZ0 340 aaKnown RBP22.04■■□□□ 1.12
TFF3-204ENST00000518498 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.04■■□□□ 1.12
TFF3-204ENST00000518498 TMOD4Q9NZQ9 345 aa22.04■■□□□ 1.12
TFF3-204ENST00000518498 FPGT-TNNI3KV9GXZ4 949 aa22.04■■□□□ 1.12
TFF3-204ENST00000518498 HMGCRP04035 888 aa22.03■■□□□ 1.12
TFF3-204ENST00000518498 BACE1P56817 501 aa22.03■■□□□ 1.12
TFF3-204ENST00000518498 OS9Q13438 667 aaPredicted RBP22.03■■□□□ 1.12
TFF3-204ENST00000518498 NECAB2Q7Z6G3 386 aa22.03■■□□□ 1.12
TFF3-204ENST00000518498 MAPKAPK5Q8IW41 473 aa22.03■■□□□ 1.12
TFF3-204ENST00000518498 DBNDD2Q9BQY9 259 aa22.03■■□□□ 1.12
TFF3-204ENST00000518498 TRIM34Q9BYJ4 488 aa22.03■■□□□ 1.12
TFF3-204ENST00000518498 MORF4L1Q9UBU8 362 aa22.03■■□□□ 1.12
TFF3-204ENST00000518498 C19orf81C9J6K1 198 aa22.02■■□□□ 1.12
TFF3-204ENST00000518498 IGSF3O75054 1194 aa22.02■■□□□ 1.12
TFF3-204ENST00000518498 CYP2E1P05181 493 aaPredicted RBP22.02■■□□□ 1.12
TFF3-204ENST00000518498 HOXA7P31268 230 aaPredicted RBP22.02■■□□□ 1.12
TFF3-204ENST00000518498 IRX3P78415 501 aaPredicted RBP22.02■■□□□ 1.12
TFF3-204ENST00000518498 MTMR2Q13614 643 aa22.02■■□□□ 1.12
TFF3-204ENST00000518498 CRACR2BQ8N4Y2 399 aaPredicted RBP22.02■■□□□ 1.12
TFF3-204ENST00000518498 P2RX7Q99572 595 aaKnown RBP22.02■■□□□ 1.12
TFF3-204ENST00000518498 HMX1Q9NP08 348 aaPredicted RBP22.02■■□□□ 1.12
TFF3-204ENST00000518498 RPTORQ8N122 1335 aa22.02■■□□□ 1.12
TFF3-204ENST00000518498 METTL16Q86W50 562 aaKnown RBP22.01■■□□□ 1.11
TFF3-204ENST00000518498 ANKLE1Q8NAG6 615 aa22.01■■□□□ 1.11
TFF3-204ENST00000518498 ZNF512BQ96KM6 892 aaPredicted RBP22.01■■□□□ 1.11
TFF3-204ENST00000518498 GINM1Q9NU53 330 aa22.01■■□□□ 1.11
TFF3-204ENST00000518498 PALD1Q9ULE6 856 aa22.01■■□□□ 1.11
TFF3-204ENST00000518498 LOC285556D6RIA3 1793 aa22.01■■□□□ 1.11
TFF3-204ENST00000518498 ATAD5Q96QE3 1844 aa22.01■■□□□ 1.11
TFF3-204ENST00000518498 USP17L10C9JJH3 530 aa22■■□□□ 1.11
TFF3-204ENST00000518498 JAG1P78504 1218 aa22■■□□□ 1.11
TFF3-204ENST00000518498 ADGRA1Q86SQ6 560 aa22■■□□□ 1.11
TFF3-204ENST00000518498 GPRC5AQ8NFJ5 357 aa22■■□□□ 1.11
TFF3-204ENST00000518498 EXOC6BQ9Y2D4 811 aa22■■□□□ 1.11
TFF3-204ENST00000518498 FLT1P17948 1338 aa22■■□□□ 1.11
TFF3-204ENST00000518498 A0A1W2PPC1 479 aa21.99■■□□□ 1.11
TFF3-204ENST00000518498 ZAP70P43403 619 aa21.99■■□□□ 1.11
TFF3-204ENST00000518498 KIF1BPQ96EK5 621 aa21.99■■□□□ 1.11
TFF3-204ENST00000518498 STAP2Q9UGK3 403 aa21.99■■□□□ 1.11
TFF3-204ENST00000518498 DOCK3Q8IZD9 2030 aa21.98■■□□□ 1.11
TFF3-204ENST00000518498 HLA-DOAP06340 250 aa21.98■■□□□ 1.11
TFF3-204ENST00000518498 CYP2B6P20813 491 aa21.98■■□□□ 1.11
TFF3-204ENST00000518498 NUCB1Q02818 461 aa21.98■■□□□ 1.11
TFF3-204ENST00000518498 TRIM32Q13049 653 aa21.98■■□□□ 1.11
TFF3-204ENST00000518498 ANKRD45Q5TZF3 282 aa21.98■■□□□ 1.11
TFF3-204ENST00000518498 DIS3LQ8TF46 1054 aaKnown RBP21.98■■□□□ 1.11
TFF3-204ENST00000518498 NUDT12Q9BQG2 462 aa21.98■■□□□ 1.11
TFF3-204ENST00000518498 LRRCC1Q9C099 1032 aa21.98■■□□□ 1.11
TFF3-204ENST00000518498 DNAJC18Q9H819 358 aa21.98■■□□□ 1.11
TFF3-204ENST00000518498 SAP30BPQ9UHR5 308 aaKnown RBP21.98■■□□□ 1.11
TFF3-204ENST00000518498 GDF11O95390 407 aa21.97■■□□□ 1.11
TFF3-204ENST00000518498 HERVK_113P62684 666 aa21.97■■□□□ 1.11
TFF3-204ENST00000518498 NBPF3Q9H094 633 aa21.97■■□□□ 1.11
TFF3-204ENST00000518498 PIH1D3Q9NQM4 214 aaKnown RBP21.97■■□□□ 1.11
TFF3-204ENST00000518498 RBPJLQ9UBG7 517 aa21.97■■□□□ 1.11
TFF3-204ENST00000518498 CEP290O15078 2479 aa21.96■■□□□ 1.11
TFF3-204ENST00000518498 CYP7A1P22680 504 aa21.96■■□□□ 1.11
TFF3-204ENST00000518498 DYNLL1P63167 89 aaKnown RBP21.96■■□□□ 1.11
TFF3-204ENST00000518498 CCAR1Q8IX12 1150 aaKnown RBP21.96■■□□□ 1.11
TFF3-204ENST00000518498 TRIB2Q92519 343 aa21.96■■□□□ 1.11
TFF3-204ENST00000518498 TXNRD2Q9NNW7 524 aa21.96■■□□□ 1.11
TFF3-204ENST00000518498 ZBTB21Q9ULJ3 1066 aa21.96■■□□□ 1.11
TFF3-204ENST00000518498 PEX10O60683 326 aa21.95■■□□□ 1.1
TFF3-204ENST00000518498 XRCC5P13010 732 aaKnown RBP21.95■■□□□ 1.1
TFF3-204ENST00000518498 MAPK4P31152 587 aa21.95■■□□□ 1.1
TFF3-204ENST00000518498 SHROOM1Q2M3G4 852 aaPredicted RBP21.95■■□□□ 1.1
TFF3-204ENST00000518498 Q3C1V9 767 aa21.95■■□□□ 1.1
TFF3-204ENST00000518498 USP17L2Q6R6M4 530 aa21.95■■□□□ 1.1
TFF3-204ENST00000518498 CHD1LQ86WJ1 897 aa21.95■■□□□ 1.1
TFF3-204ENST00000518498 CCDC8Q9H0W5 538 aaPredicted RBP21.95■■□□□ 1.1
TFF3-204ENST00000518498 TRMT44Q8IYL2 757 aaKnown RBP21.94■■□□□ 1.1
TFF3-204ENST00000518498 C7orf61Q8IZ16 206 aa21.94■■□□□ 1.1
TFF3-204ENST00000518498 RHPN1Q8TCX5 695 aa21.94■■□□□ 1.1
TFF3-204ENST00000518498 GTF3C2Q8WUA4 911 aaPredicted RBP21.94■■□□□ 1.1
TFF3-204ENST00000518498 SOCS4Q8WXH5 440 aa21.94■■□□□ 1.1
TFF3-204ENST00000518498 C11orf49Q9H6J7 331 aa21.94■■□□□ 1.1
TFF3-204ENST00000518498 EMILIN3Q9NT22 766 aa21.94■■□□□ 1.1
TFF3-204ENST00000518498 DBNLQ9UJU6 430 aaKnown RBP21.94■■□□□ 1.1
TFF3-204ENST00000518498 OGDHLQ9ULD0 1010 aa21.94■■□□□ 1.1
TFF3-204ENST00000518498 SIPA1L1O43166 1804 aa21.94■■□□□ 1.1
TFF3-204ENST00000518498 TRIOBPQ9H2D6 2365 aa21.94■■□□□ 1.1
TFF3-204ENST00000518498 APBB1O00213 710 aa21.93■■□□□ 1.1
TFF3-204ENST00000518498 IDH1O75874 414 aaKnown RBP21.93■■□□□ 1.1
TFF3-204ENST00000518498 USP5P45974 858 aa21.93■■□□□ 1.1
TFF3-204ENST00000518498 ERVK-9P63128 1117 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms