RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CRNKL1Q9BZJ0 848 aaKnown RBP21.12■□□□□ 0.97
SDC2-202ENST00000518385 NCOA5Q9HCD5 579 aaKnown RBP21.12■□□□□ 0.97
SDC2-202ENST00000518385 ATP8A2Q9NTI2 1148 aa21.12■□□□□ 0.97
SDC2-202ENST00000518385 FAM205AQ6ZU69 1335 aa21.12■□□□□ 0.97
SDC2-202ENST00000518385 NID2Q14112 1375 aa21.12■□□□□ 0.97
SDC2-202ENST00000518385 CTDSPL2Q05D32 466 aa21.11■□□□□ 0.97
SDC2-202ENST00000518385 TMEM67Q5HYA8 995 aa21.11■□□□□ 0.97
SDC2-202ENST00000518385 SYNE3Q6ZMZ3 975 aa21.11■□□□□ 0.97
SDC2-202ENST00000518385 RTKN2Q8IZC4 609 aa21.11■□□□□ 0.97
SDC2-202ENST00000518385 ZNF384Q8TF68 577 aa21.11■□□□□ 0.97
SDC2-202ENST00000518385 LY9Q9HBG7 655 aa21.11■□□□□ 0.97
SDC2-202ENST00000518385 GPHNQ9NQX3 736 aaPredicted RBP21.11■□□□□ 0.97
SDC2-202ENST00000518385 ZSWIM5Q9P217 1185 aa21.11■□□□□ 0.97
SDC2-202ENST00000518385 JAG2Q9Y219 1238 aa21.11■□□□□ 0.97
SDC2-202ENST00000518385 ERICH2A1L162 156 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 NRDCO43847 1150 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 FGRP09769 529 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 PRDX5P30044 214 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 METAP2P50579 478 aaKnown RBP eCLIP21.1■□□□□ 0.97
SDC2-202ENST00000518385 CAMK4Q16566 473 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 CCDC93Q567U6 631 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 CEP135Q66GS9 1140 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 APOA5Q6Q788 366 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 FERMT3Q86UX7 667 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 LRRC8AQ8IWT6 810 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 PGBD1Q96JS3 809 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 BPIFA3Q9BQP9 254 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 IFIT3O14879 490 aaKnown RBP21.1■□□□□ 0.97
SDC2-202ENST00000518385 ZBTB43O43298 467 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 NR1I2O75469 434 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 LDHBP07195 334 aaKnown RBP21.1■□□□□ 0.97
SDC2-202ENST00000518385 LDHCP07864 332 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 CBX1P83916 185 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 PPP2R5BQ15173 497 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 DOK7Q18PE1 504 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 CKAP2LQ8IYA6 745 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 TBC1D22AQ8WUA7 517 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 ESR2Q92731 530 aa21.1■□□□□ 0.97
SDC2-202ENST00000518385 CCDC69A6NI79 296 aa21.09■□□□□ 0.97
SDC2-202ENST00000518385 G3V3G9 751 aa21.09■□□□□ 0.97
SDC2-202ENST00000518385 FDPSP14324 419 aaKnown RBP21.09■□□□□ 0.97
SDC2-202ENST00000518385 DCAF8Q5TAQ9 597 aa21.09■□□□□ 0.97
SDC2-202ENST00000518385 SOGA3Q5TF21 947 aa21.09■□□□□ 0.97
SDC2-202ENST00000518385 PODNQ7Z5L7 613 aa21.09■□□□□ 0.97
SDC2-202ENST00000518385 CEP57L1Q8IYX8 460 aa21.09■□□□□ 0.97
SDC2-202ENST00000518385 ZNF397Q8NF99 534 aaPredicted RBP21.09■□□□□ 0.97
SDC2-202ENST00000518385 ERO1AQ96HE7 468 aa21.09■□□□□ 0.97
SDC2-202ENST00000518385 ORC3Q9UBD5 711 aaPredicted RBP21.09■□□□□ 0.97
SDC2-202ENST00000518385 PPP1R1BQ9UD71 204 aaPredicted RBP21.09■□□□□ 0.97
SDC2-202ENST00000518385 DDX41Q9UJV9 622 aaKnown RBP21.09■□□□□ 0.97
SDC2-202ENST00000518385 SLC12A7Q9Y666 1083 aa21.09■□□□□ 0.97
SDC2-202ENST00000518385 MORC2Q9Y6X9 1032 aaPredicted RBP21.09■□□□□ 0.97
SDC2-202ENST00000518385 CCP110O43303 1012 aa21.08■□□□□ 0.97
SDC2-202ENST00000518385 KINO60870 393 aaKnown RBP21.08■□□□□ 0.97
SDC2-202ENST00000518385 SLC3A2P08195 630 aaKnown RBP21.08■□□□□ 0.97
SDC2-202ENST00000518385 FAM160A1Q05DH4 1040 aa21.08■□□□□ 0.97
SDC2-202ENST00000518385 SBK1Q52WX2 424 aa21.08■□□□□ 0.97
SDC2-202ENST00000518385 DALRD3Q5D0E6 543 aaKnown RBP21.08■□□□□ 0.97
SDC2-202ENST00000518385 NFXL1Q6ZNB6 911 aa21.08■□□□□ 0.97
SDC2-202ENST00000518385 NYAP1Q6ZVC0 841 aa21.08■□□□□ 0.97
SDC2-202ENST00000518385 DZIP1Q86YF9 867 aaKnown RBP21.08■□□□□ 0.97
SDC2-202ENST00000518385 PSMD1Q99460 953 aa21.08■□□□□ 0.97
SDC2-202ENST00000518385 DNAJC25Q9H1X3 360 aa21.08■□□□□ 0.97
SDC2-202ENST00000518385 SPON1Q9HCB6 807 aa21.08■□□□□ 0.97
SDC2-202ENST00000518385 BECN2A8MW95 431 aa21.07■□□□□ 0.96
SDC2-202ENST00000518385 GTF2IP78347 998 aa21.07■□□□□ 0.96
SDC2-202ENST00000518385 PTPN14Q15678 1187 aa21.07■□□□□ 0.96
SDC2-202ENST00000518385 CACTINQ8WUQ7 758 aaKnown RBP21.07■□□□□ 0.96
SDC2-202ENST00000518385 SDR42E1Q8WUS8 393 aa21.07■□□□□ 0.96
SDC2-202ENST00000518385 C8orf76Q96K31 380 aa21.07■□□□□ 0.96
SDC2-202ENST00000518385 OSBPL5Q9H0X9 879 aaPredicted RBP21.07■□□□□ 0.96
SDC2-202ENST00000518385 CCDC196A0A1B0GTZ2 297 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 A0A1W2PQ27 194 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 A0A1W2PQ64 194 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 A0A1W2PQD8 194 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 DTNBO60941 627 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 DYNLL1P63167 89 aaKnown RBP21.06■□□□□ 0.96
SDC2-202ENST00000518385 TPM4P67936 248 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 WTAPQ15007 396 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 CCDC150Q8NCX0 1101 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 FBXO18Q8NFZ0 1043 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 TFIP11Q9UBB9 837 aaKnown RBP21.06■□□□□ 0.96
SDC2-202ENST00000518385 ARPP21Q9UBL0 812 aaPredicted RBP21.06■□□□□ 0.96
SDC2-202ENST00000518385 STK36Q9NRP7 1315 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 MINDY4BA8MYZ0 360 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 BAG3O95817 575 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 PPP4CP60510 307 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 GRIK5Q16478 980 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 MFSD14BQ5SR56 506 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 BRAPQ7Z569 592 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 TSC1Q92574 1164 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 C16orf45Q96MC5 204 aaPredicted RBP21.06■□□□□ 0.96
SDC2-202ENST00000518385 UBAC1Q9BSL1 405 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 VPS33BQ9H267 617 aa21.06■□□□□ 0.96
SDC2-202ENST00000518385 GOLGA8AA7E2F4 631 aa21.05■□□□□ 0.96
SDC2-202ENST00000518385 ORC4O43929 436 aa21.05■□□□□ 0.96
SDC2-202ENST00000518385 AOC3Q16853 763 aa21.05■□□□□ 0.96
SDC2-202ENST00000518385 SLF2Q8IX21 1173 aa21.05■□□□□ 0.96
SDC2-202ENST00000518385 KIF18AQ8NI77 898 aa21.05■□□□□ 0.96
SDC2-202ENST00000518385 WASF1Q92558 559 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms