RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 BCAR3O75815 825 aa18.67■□□□□ 0.58
CSGALNACT1-204ENST00000517494 PRKAR2AP13861 404 aaKnown RBP18.67■□□□□ 0.58
CSGALNACT1-204ENST00000517494 HERVK_113P62684 666 aa18.67■□□□□ 0.58
CSGALNACT1-204ENST00000517494 JAG1P78504 1218 aa18.67■□□□□ 0.58
CSGALNACT1-204ENST00000517494 TNNI3KQ59H18 835 aa18.67■□□□□ 0.58
CSGALNACT1-204ENST00000517494 ADGRA1Q86SQ6 560 aa18.67■□□□□ 0.58
CSGALNACT1-204ENST00000517494 GPRC5AQ8NFJ5 357 aa18.67■□□□□ 0.58
CSGALNACT1-204ENST00000517494 NUDT12Q9BQG2 462 aa18.67■□□□□ 0.58
CSGALNACT1-204ENST00000517494 DBNDD2Q9BQY9 259 aa18.67■□□□□ 0.58
CSGALNACT1-204ENST00000517494 PAGR1Q9BTK6 254 aa18.67■□□□□ 0.58
CSGALNACT1-204ENST00000517494 DNAJC18Q9H819 358 aa18.67■□□□□ 0.58
CSGALNACT1-204ENST00000517494 TXNRD2Q9NNW7 524 aa18.67■□□□□ 0.58
CSGALNACT1-204ENST00000517494 FPGT-TNNI3KV9GXZ4 949 aa18.67■□□□□ 0.58
CSGALNACT1-204ENST00000517494 ATAD5Q96QE3 1844 aa18.66■□□□□ 0.58
CSGALNACT1-204ENST00000517494 USP17L10C9JJH3 530 aa18.66■□□□□ 0.58
CSGALNACT1-204ENST00000517494 HLA-DOAP06340 250 aa18.66■□□□□ 0.58
CSGALNACT1-204ENST00000517494 SLC17A8Q8NDX2 589 aa18.66■□□□□ 0.58
CSGALNACT1-204ENST00000517494 SOCS4Q8WXH5 440 aa18.66■□□□□ 0.58
CSGALNACT1-204ENST00000517494 ZBTB21Q9ULJ3 1066 aa18.66■□□□□ 0.58
CSGALNACT1-204ENST00000517494 ZKSCAN1P17029 563 aaPredicted RBP18.65■□□□□ 0.58
CSGALNACT1-204ENST00000517494 ZYXQ15942 572 aaKnown RBP18.65■□□□□ 0.58
CSGALNACT1-204ENST00000517494 FOXP4Q8IVH2 680 aaPredicted RBP18.65■□□□□ 0.58
CSGALNACT1-204ENST00000517494 LAMA3Q16787 3333 aa18.65■□□□□ 0.58
CSGALNACT1-204ENST00000517494 C19orf81C9J6K1 198 aa18.64■□□□□ 0.57
CSGALNACT1-204ENST00000517494 SURF6O75683 361 aaKnown RBP18.64■□□□□ 0.57
CSGALNACT1-204ENST00000517494 CYP2E1P05181 493 aaPredicted RBP18.64■□□□□ 0.57
CSGALNACT1-204ENST00000517494 HOXA7P31268 230 aaPredicted RBP18.64■□□□□ 0.57
CSGALNACT1-204ENST00000517494 ZAP70P43403 619 aa18.64■□□□□ 0.57
CSGALNACT1-204ENST00000517494 PPP4CP60510 307 aa18.64■□□□□ 0.57
CSGALNACT1-204ENST00000517494 DYNLL1P63167 89 aaKnown RBP18.64■□□□□ 0.57
CSGALNACT1-204ENST00000517494 TMEM57Q8N5G2 664 aa18.64■□□□□ 0.57
CSGALNACT1-204ENST00000517494 FEZ1Q99689 392 aa18.64■□□□□ 0.57
CSGALNACT1-204ENST00000517494 C1orf115Q9H7X2 142 aa18.64■□□□□ 0.57
CSGALNACT1-204ENST00000517494 PIH1D3Q9NQM4 214 aaKnown RBP18.64■□□□□ 0.57
CSGALNACT1-204ENST00000517494 DOCK3Q8IZD9 2030 aa18.64■□□□□ 0.57
CSGALNACT1-204ENST00000517494 CYP7A1P22680 504 aa18.63■□□□□ 0.57
CSGALNACT1-204ENST00000517494 MAPK4P31152 587 aa18.63■□□□□ 0.57
CSGALNACT1-204ENST00000517494 ERVK-9P63128 1117 aa18.63■□□□□ 0.57
CSGALNACT1-204ENST00000517494 ERVK-24P63145 666 aa18.63■□□□□ 0.57
CSGALNACT1-204ENST00000517494 MIGA1Q8NAN2 632 aa18.63■□□□□ 0.57
CSGALNACT1-204ENST00000517494 GDF15Q99988 308 aa18.63■□□□□ 0.57
CSGALNACT1-204ENST00000517494 PORCNQ9H237 461 aa18.63■□□□□ 0.57
CSGALNACT1-204ENST00000517494 OGDHLQ9ULD0 1010 aa18.63■□□□□ 0.57
CSGALNACT1-204ENST00000517494 IDH1O75874 414 aaKnown RBP18.62■□□□□ 0.57
CSGALNACT1-204ENST00000517494 GH2P01242 217 aa18.62■□□□□ 0.57
CSGALNACT1-204ENST00000517494 MAGEA10P43363 369 aaPredicted RBP18.62■□□□□ 0.57
CSGALNACT1-204ENST00000517494 USP5P45974 858 aa18.62■□□□□ 0.57
CSGALNACT1-204ENST00000517494 MNX1P50219 401 aaPredicted RBP18.62■□□□□ 0.57
CSGALNACT1-204ENST00000517494 WDR78Q5VTH9 848 aa18.62■□□□□ 0.57
CSGALNACT1-204ENST00000517494 GPR108Q9NPR9 543 aa18.62■□□□□ 0.57
CSGALNACT1-204ENST00000517494 RBPJLQ9UBG7 517 aa18.62■□□□□ 0.57
CSGALNACT1-204ENST00000517494 MAST2Q6P0Q8 1798 aa18.62■□□□□ 0.57
CSGALNACT1-204ENST00000517494 SIPA1L1O43166 1804 aa18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 XRCC5P13010 732 aaKnown RBP18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 RGS2P41220 211 aa18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 CACNB2Q08289 660 aaPredicted RBP18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 POLA2Q14181 598 aa18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 CCL14Q16627 93 aa18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 Q3C1V9 767 aa18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 MAP3K21Q5TCX8 1036 aa18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 ZKSCAN2Q63HK3 967 aa18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 USP17L2Q6R6M4 530 aa18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 GPR142Q7Z601 462 aa18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 PLEKHH3Q7Z736 793 aa18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 EMILIN3Q9NT22 766 aa18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 TLR7Q9NYK1 1049 aaKnown RBP18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 NDUFB9Q9Y6M9 179 aa18.61■□□□□ 0.57
CSGALNACT1-204ENST00000517494 DDX60LQ5H9U9 1706 aaKnown RBP18.6■□□□□ 0.57
CSGALNACT1-204ENST00000517494 PFASO15067 1338 aa18.6■□□□□ 0.57
CSGALNACT1-204ENST00000517494 DLL1O00548 723 aa18.6■□□□□ 0.57
CSGALNACT1-204ENST00000517494 CCND3P30281 292 aaPredicted RBP18.6■□□□□ 0.57
CSGALNACT1-204ENST00000517494 BMP8BP34820 402 aa18.6■□□□□ 0.57
CSGALNACT1-204ENST00000517494 RAB3GAP1Q15042 981 aa18.6■□□□□ 0.57
CSGALNACT1-204ENST00000517494 METTL16Q86W50 562 aaKnown RBP18.6■□□□□ 0.57
CSGALNACT1-204ENST00000517494 TRMT44Q8IYL2 757 aaKnown RBP18.6■□□□□ 0.57
CSGALNACT1-204ENST00000517494 GTF3C2Q8WUA4 911 aaPredicted RBP18.6■□□□□ 0.57
CSGALNACT1-204ENST00000517494 APBA2Q99767 749 aa18.6■□□□□ 0.57
CSGALNACT1-204ENST00000517494 UBE2OQ9C0C9 1292 aaKnown RBP18.6■□□□□ 0.57
CSGALNACT1-204ENST00000517494 CCDC8Q9H0W5 538 aaPredicted RBP18.6■□□□□ 0.57
CSGALNACT1-204ENST00000517494 GINM1Q9NU53 330 aa18.6■□□□□ 0.57
CSGALNACT1-204ENST00000517494 ALPK3Q96L96 1907 aa18.59■□□□□ 0.57
CSGALNACT1-204ENST00000517494 ATP8B2P98198 1209 aa18.59■□□□□ 0.57
CSGALNACT1-204ENST00000517494 FTSJ3Q8IY81 847 aaKnown RBP18.59■□□□□ 0.57
CSGALNACT1-204ENST00000517494 DEFB123Q8N688 67 aa18.59■□□□□ 0.57
CSGALNACT1-204ENST00000517494 MAGEB6Q8N7X4 407 aa18.59■□□□□ 0.57
CSGALNACT1-204ENST00000517494 SSH3Q8TE77 659 aa18.59■□□□□ 0.57
CSGALNACT1-204ENST00000517494 DBNLQ9UJU6 430 aaKnown RBP18.59■□□□□ 0.57
CSGALNACT1-204ENST00000517494 MORN1Q5T089 497 aa18.58■□□□□ 0.56
CSGALNACT1-204ENST00000517494 Q7L0L9 218 aa18.58■□□□□ 0.56
CSGALNACT1-204ENST00000517494 ITPRIPQ8IWB1 547 aa18.58■□□□□ 0.56
CSGALNACT1-204ENST00000517494 TDHQ8IZJ6 230 aa18.58■□□□□ 0.56
CSGALNACT1-204ENST00000517494 USP17L15C9J2P7 530 aa18.57■□□□□ 0.56
CSGALNACT1-204ENST00000517494 USP17L13C9JLJ4 530 aa18.57■□□□□ 0.56
CSGALNACT1-204ENST00000517494 USP17L11C9JVI0 530 aa18.57■□□□□ 0.56
CSGALNACT1-204ENST00000517494 USP17L18D6R9N7 530 aa18.57■□□□□ 0.56
CSGALNACT1-204ENST00000517494 USP17L22D6RA61 530 aa18.57■□□□□ 0.56
CSGALNACT1-204ENST00000517494 USP17L17D6RBQ6 530 aa18.57■□□□□ 0.56
CSGALNACT1-204ENST00000517494 USP17L19D6RCP7 530 aa18.57■□□□□ 0.56
CSGALNACT1-204ENST00000517494 USP17L20D6RJB6 530 aa18.57■□□□□ 0.56
CSGALNACT1-204ENST00000517494 CCNA1P78396 465 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms