RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 FGAP02671 866 aa17.29■□□□□ 0.36
SNF8-212ENST00000514089 SHMT1P34896 483 aa17.29■□□□□ 0.36
SNF8-212ENST00000514089 PPARAQ07869 468 aa17.29■□□□□ 0.36
SNF8-212ENST00000514089 SPP2Q13103 211 aa17.29■□□□□ 0.36
SNF8-212ENST00000514089 CCL15Q16663 113 aa17.29■□□□□ 0.36
SNF8-212ENST00000514089 SLC44A5Q8NCS7 719 aa17.29■□□□□ 0.36
SNF8-212ENST00000514089 CCDC17Q96LX7 622 aa17.29■□□□□ 0.36
SNF8-212ENST00000514089 TBC1D2Q9BYX2 928 aa17.29■□□□□ 0.36
SNF8-212ENST00000514089 DNAJC18Q9H819 358 aa17.29■□□□□ 0.36
SNF8-212ENST00000514089 POLR2AP24928 1970 aaKnown RBP17.29■□□□□ 0.36
SNF8-212ENST00000514089 CXCL11O14625 94 aa17.28■□□□□ 0.36
SNF8-212ENST00000514089 ZNF213O14771 459 aa17.28■□□□□ 0.36
SNF8-212ENST00000514089 GJA5P36382 358 aa17.28■□□□□ 0.36
SNF8-212ENST00000514089 TM4SF4P48230 202 aa17.28■□□□□ 0.36
SNF8-212ENST00000514089 EVX2Q03828 476 aa17.28■□□□□ 0.36
SNF8-212ENST00000514089 GABPAQ06546 454 aa17.28■□□□□ 0.36
SNF8-212ENST00000514089 RRP1BQ14684 758 aaKnown RBP17.28■□□□□ 0.36
SNF8-212ENST00000514089 ALX1Q15699 326 aa17.28■□□□□ 0.36
SNF8-212ENST00000514089 C16orf86Q6ZW13 317 aa17.28■□□□□ 0.36
SNF8-212ENST00000514089 ZNF280CQ8ND82 737 aa17.28■□□□□ 0.36
SNF8-212ENST00000514089 FEZ1Q99689 392 aa17.28■□□□□ 0.36
SNF8-212ENST00000514089 ZBTB21Q9ULJ3 1066 aa17.28■□□□□ 0.36
SNF8-212ENST00000514089 RAD50Q92878 1312 aa17.27■□□□□ 0.36
SNF8-212ENST00000514089 CA12O43570 354 aa17.27■□□□□ 0.36
SNF8-212ENST00000514089 CDC45O75419 566 aa17.27■□□□□ 0.36
SNF8-212ENST00000514089 TRPA1O75762 1119 aa17.27■□□□□ 0.36
SNF8-212ENST00000514089 ALDH1A1P00352 501 aa17.27■□□□□ 0.36
SNF8-212ENST00000514089 HSPA1AP0DMV8 641 aaKnown RBP17.27■□□□□ 0.36
SNF8-212ENST00000514089 HSPA1BP0DMV9 641 aaKnown RBP17.27■□□□□ 0.36
SNF8-212ENST00000514089 ATP2B2Q01814 1243 aa17.27■□□□□ 0.36
SNF8-212ENST00000514089 GADL1Q6ZQY3 521 aa17.27■□□□□ 0.36
SNF8-212ENST00000514089 FASTKD5Q7L8L6 764 aaKnown RBP17.27■□□□□ 0.36
SNF8-212ENST00000514089 CCDC84Q86UT8 332 aaPredicted RBP17.27■□□□□ 0.36
SNF8-212ENST00000514089 WBP1LQ9NX94 342 aa17.27■□□□□ 0.36
SNF8-212ENST00000514089 TMOD4Q9NZQ9 345 aa17.27■□□□□ 0.36
SNF8-212ENST00000514089 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.27■□□□□ 0.36
SNF8-212ENST00000514089 AFG3L2Q9Y4W6 797 aa17.27■□□□□ 0.36
SNF8-212ENST00000514089 PRDM1O75626 825 aa17.26■□□□□ 0.35
SNF8-212ENST00000514089 HAND2P61296 217 aa17.26■□□□□ 0.35
SNF8-212ENST00000514089 CTDSPL2Q05D32 466 aa17.26■□□□□ 0.35
SNF8-212ENST00000514089 IMMTQ16891 758 aaKnown RBP17.26■□□□□ 0.35
SNF8-212ENST00000514089 TMEM179Q6ZVK1 233 aa17.26■□□□□ 0.35
SNF8-212ENST00000514089 DSCC1Q9BVC3 393 aa17.26■□□□□ 0.35
SNF8-212ENST00000514089 SMIM22K7EJ46 135 aa17.25■□□□□ 0.35
SNF8-212ENST00000514089 RRP12Q5JTH9 1297 aaKnown RBP17.25■□□□□ 0.35
SNF8-212ENST00000514089 IFNL1Q8IU54 200 aa17.25■□□□□ 0.35
SNF8-212ENST00000514089 MS4A4AQ96JQ5 239 aa17.25■□□□□ 0.35
SNF8-212ENST00000514089 RNF186Q9NXI6 227 aa17.25■□□□□ 0.35
SNF8-212ENST00000514089 TRPM7Q96QT4 1865 aa17.24■□□□□ 0.35
SNF8-212ENST00000514089 ECM29Q5VYK3 1845 aa17.24■□□□□ 0.35
SNF8-212ENST00000514089 USP17L10C9JJH3 530 aa17.24■□□□□ 0.35
SNF8-212ENST00000514089 SGSM2O43147 1006 aa17.24■□□□□ 0.35
SNF8-212ENST00000514089 RANBP6O60518 1105 aaKnown RBP17.24■□□□□ 0.35
SNF8-212ENST00000514089 TSPY3P0CV98 308 aa17.24■□□□□ 0.35
SNF8-212ENST00000514089 TSPY8P0CW00 308 aa17.24■□□□□ 0.35
SNF8-212ENST00000514089 AKR1B1P15121 316 aa17.24■□□□□ 0.35
SNF8-212ENST00000514089 JAG1P78504 1218 aa17.24■□□□□ 0.35
SNF8-212ENST00000514089 SEPT2Q15019 361 aa17.24■□□□□ 0.35
SNF8-212ENST00000514089 MFSD6Q6ZSS7 791 aa17.24■□□□□ 0.35
SNF8-212ENST00000514089 BRI3BPQ8WY22 251 aa17.24■□□□□ 0.35
SNF8-212ENST00000514089 WDR18Q9BV38 432 aa17.24■□□□□ 0.35
SNF8-212ENST00000514089 RNF41Q9H4P4 317 aaPredicted RBP17.24■□□□□ 0.35
SNF8-212ENST00000514089 KCNH4Q9UQ05 1017 aa17.24■□□□□ 0.35
SNF8-212ENST00000514089 DOCK2Q92608 1830 aa17.24■□□□□ 0.35
SNF8-212ENST00000514089 TESPA1A2RU30 521 aaPredicted RBP17.23■□□□□ 0.35
SNF8-212ENST00000514089 TSPY2A6NKD2 308 aa17.23■□□□□ 0.35
SNF8-212ENST00000514089 C19orf81C9J6K1 198 aa17.23■□□□□ 0.35
SNF8-212ENST00000514089 RAD21O60216 631 aa17.23■□□□□ 0.35
SNF8-212ENST00000514089 CTCFP49711 727 aaPredicted RBP17.23■□□□□ 0.35
SNF8-212ENST00000514089 TFAP4Q01664 338 aa17.23■□□□□ 0.35
SNF8-212ENST00000514089 MTMR2Q13614 643 aa17.23■□□□□ 0.35
SNF8-212ENST00000514089 ZYXQ15942 572 aaKnown RBP17.23■□□□□ 0.35
SNF8-212ENST00000514089 SHROOM1Q2M3G4 852 aaPredicted RBP17.23■□□□□ 0.35
SNF8-212ENST00000514089 ESYT1Q9BSJ8 1104 aa17.23■□□□□ 0.35
SNF8-212ENST00000514089 SH2D4AQ9H788 454 aa17.23■□□□□ 0.35
SNF8-212ENST00000514089 KANSL2Q9H9L4 492 aa17.23■□□□□ 0.35
SNF8-212ENST00000514089 ARHGEF10LQ9HCE6 1279 aa17.23■□□□□ 0.35
SNF8-212ENST00000514089 ANO2Q9NQ90 1003 aa17.23■□□□□ 0.35
SNF8-212ENST00000514089 ANAPC4Q9UJX5 808 aa17.23■□□□□ 0.35
SNF8-212ENST00000514089 U3KPZ7 1027 aaPredicted RBP17.23■□□□□ 0.35
SNF8-212ENST00000514089 A0A0G2JLL6 359 aaPredicted RBP17.22■□□□□ 0.35
SNF8-212ENST00000514089 FOXP2O15409 715 aa17.22■□□□□ 0.35
SNF8-212ENST00000514089 TBC1D8O95759 1140 aa17.22■□□□□ 0.35
SNF8-212ENST00000514089 USP14P54578 494 aa17.22■□□□□ 0.35
SNF8-212ENST00000514089 HMGCS2P54868 508 aa17.22■□□□□ 0.35
SNF8-212ENST00000514089 BACE1P56817 501 aa17.22■□□□□ 0.35
SNF8-212ENST00000514089 ICA1Q05084 483 aa17.22■□□□□ 0.35
SNF8-212ENST00000514089 PABPC4Q13310 644 aaKnown RBP eCLIP17.22■□□□□ 0.352e-8■■■□□ 15.8
SNF8-212ENST00000514089 PRRT2Q7Z6L0 340 aaPredicted RBP17.22■□□□□ 0.35
SNF8-212ENST00000514089 ZFYVE28Q9HCC9 887 aa17.22■□□□□ 0.35
SNF8-212ENST00000514089 TSKSQ9UJT2 592 aa17.22■□□□□ 0.35
SNF8-212ENST00000514089 BTBD19C9JJ37 291 aa17.21■□□□□ 0.35
SNF8-212ENST00000514089 PDHXO00330 501 aa17.21■□□□□ 0.35
SNF8-212ENST00000514089 RASA1P20936 1047 aa17.21■□□□□ 0.35
SNF8-212ENST00000514089 TAF1CQ15572 869 aaPredicted RBP17.21■□□□□ 0.35
SNF8-212ENST00000514089 FAM47AQ5JRC9 791 aa17.21■□□□□ 0.35
SNF8-212ENST00000514089 AKNAD1Q5T1N1 836 aa17.21■□□□□ 0.35
SNF8-212ENST00000514089 USP17L2Q6R6M4 530 aa17.21■□□□□ 0.35
SNF8-212ENST00000514089 PTPN18Q99952 460 aa17.21■□□□□ 0.35
SNF8-212ENST00000514089 INCENPQ9NQS7 918 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 224.7 ms