RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 PPP2R3AQ06190 1150 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 IKQ13123 557 aaPredicted RBP10.91□□□□□ -0.66
PHF3-208ENST00000506783 EARS2Q5JPH6 523 aaKnown RBP10.91□□□□□ -0.66
PHF3-208ENST00000506783 MB21D2Q8IYB1 491 aaPredicted RBP10.91□□□□□ -0.66
PHF3-208ENST00000506783 SYMPKQ92797 1274 aaKnown RBP10.91□□□□□ -0.66
PHF3-208ENST00000506783 FAM107BQ9H098 131 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 BRMS1Q9HCU9 246 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 JADE2Q9NQC1 790 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 TRIM10Q9UDY6 481 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 RGPD8O14715 1765 aaPredicted RBP10.91□□□□□ -0.66
PHF3-208ENST00000506783 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.91□□□□□ -0.66
PHF3-208ENST00000506783 AFF2P51816 1311 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 UBN2Q6ZU65 1347 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 CMA1P23946 247 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 UBXN1Q04323 297 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 PTGDRQ13258 359 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 USPL1Q5W0Q7 1092 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 KIAA1328Q86T90 577 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 DZIP1Q86YF9 867 aaKnown RBP10.91□□□□□ -0.66
PHF3-208ENST00000506783 C10orf67Q8IYJ2 551 aa10.91□□□□□ -0.66
PHF3-208ENST00000506783 ABL1P00519 1130 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 DMTNQ08495 405 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 DIXDC1Q155Q3 683 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 LETM2Q2VYF4 491 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 DYMQ7RTS9 669 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 BRAPQ7Z569 592 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 GSPT2Q8IYD1 628 aaKnown RBP10.9□□□□□ -0.66
PHF3-208ENST00000506783 FANCBQ8NB91 859 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 CCDC150Q8NCX0 1101 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 RGS22Q8NE09 1264 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 GJA10Q969M2 543 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 ERO1AQ96HE7 468 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 MMRN2Q9H8L6 949 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 PRDM4Q9UKN5 801 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 KIF5CO60282 957 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 KLRK1P26718 216 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 RBL2Q08999 1139 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 SEPT12Q8IYM1 358 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 MARCH10Q8NA82 808 aaPredicted RBP10.9□□□□□ -0.66
PHF3-208ENST00000506783 STRBPQ96SI9 672 aaKnown RBP10.9□□□□□ -0.66
PHF3-208ENST00000506783 MAN1B1Q9UKM7 699 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 GDAQ9Y2T3 454 aa10.9□□□□□ -0.66
PHF3-208ENST00000506783 PATL2C9JE40 543 aaKnown RBP10.89□□□□□ -0.67
PHF3-208ENST00000506783 ZSCAN12O43309 604 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 CYP27A1Q02318 531 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 CAVIN4Q5BKX8 364 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 SPTY2D1Q68D10 685 aaPredicted RBP10.89□□□□□ -0.67
PHF3-208ENST00000506783 TRIM47Q96LD4 638 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 EPB41L4AQ9HCS5 686 aaPredicted RBP10.89□□□□□ -0.67
PHF3-208ENST00000506783 ATG3Q9NT62 314 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 MST1RQ04912 1400 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 HEG1Q9ULI3 1381 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 USP42Q9H9J4 1324 aaKnown RBP10.89□□□□□ -0.67
PHF3-208ENST00000506783 MPHOSPH10O00566 681 aaKnown RBP10.89□□□□□ -0.67
PHF3-208ENST00000506783 RIMBP2O15034 1052 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 IPO7O95373 1038 aaKnown RBP10.89□□□□□ -0.67
PHF3-208ENST00000506783 CXCR5P32302 372 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 UBA7P41226 1012 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 CHRNDQ07001 517 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 RABL6Q3YEC7 729 aaPredicted RBP10.89□□□□□ -0.67
PHF3-208ENST00000506783 CERS3Q8IU89 383 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 UBA5Q9GZZ9 404 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 DEF6Q9H4E7 631 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 LOC102724428A0A0B4J2F2 783 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 WNT7AO00755 349 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 SH2B2O14492 632 aaPredicted RBP10.89□□□□□ -0.67
PHF3-208ENST00000506783 APBA3O96018 575 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 SIK1P57059 783 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 ST5P78524 1137 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 BMS1Q14692 1282 aaKnown RBP10.89□□□□□ -0.67
PHF3-208ENST00000506783 PUM3Q15397 648 aaKnown RBP10.89□□□□□ -0.67
PHF3-208ENST00000506783 JAKMIP3Q5VZ66 844 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 NCAPH2Q6IBW4 605 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 KSR1Q8IVT5 923 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 MAPKAPK5Q8IW41 473 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 ANKRD20A12PQ8NF67 263 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 BBXQ8WY36 941 aaPredicted RBP10.89□□□□□ -0.67
PHF3-208ENST00000506783 HDAC6Q9UBN7 1215 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 SH3TC1Q8TE82 1336 aa10.89□□□□□ -0.67
PHF3-208ENST00000506783 CCDC194A0A1B0GVG4 234 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 SLURP2P0DP57 97 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 TRIM21P19474 475 aaKnown RBP10.88□□□□□ -0.67
PHF3-208ENST00000506783 PRDX5P30044 214 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 KRT9P35527 623 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 CACNB1Q02641 598 aaPredicted RBP10.88□□□□□ -0.67
PHF3-208ENST00000506783 HSP90B2PQ58FF3 399 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.88□□□□□ -0.67
PHF3-208ENST00000506783 NBPF5PQ86XG9 351 aaPredicted RBP10.88□□□□□ -0.67
PHF3-208ENST00000506783 ESR2Q92731 530 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 SRP68Q9UHB9 627 aaKnown RBP10.88□□□□□ -0.67
PHF3-208ENST00000506783 YEATS4O95619 227 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 USP17L8P0C7I0 530 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 OAS2P29728 719 aaKnown RBP10.88□□□□□ -0.67
PHF3-208ENST00000506783 PPARAQ07869 468 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 GIGYF2Q6Y7W6 1299 aaKnown RBP10.88□□□□□ -0.67
PHF3-208ENST00000506783 TEX13AQ9BXU3 409 aaPredicted RBP10.88□□□□□ -0.67
PHF3-208ENST00000506783 ARFGAP3Q9NP61 516 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 USP32Q8NFA0 1604 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 USP17L3A6NCW0 530 aa10.88□□□□□ -0.67
PHF3-208ENST00000506783 USP17L4A6NCW7 530 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms