RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 GPAA1O43292 621 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 MAGEA9P43362 315 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 CFAP221Q4G0U5 840 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 SPATA1Q5VX52 437 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 DZIP1Q86YF9 867 aaKnown RBP19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 PI4K2BQ8TCG2 481 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 FBF1Q8TES7 1133 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 NDUFB9Q9Y6M9 179 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 MAP3K4Q9Y6R4 1608 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 IRX5P78411 483 aaPredicted RBP19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 CSGALNACT2Q8N6G5 542 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 IFT74Q96LB3 600 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 CCDC77Q9BR77 488 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 CLTCL1P53675 1640 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 TLDC2A0PJX2 215 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 CCT5P48643 541 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 LINC00301Q8NCQ3 95 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 CLEC11AQ9Y240 323 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 PCDHA5Q9Y5H7 936 aa19.26■□□□□ 0.67
HMGXB3-201ENST00000502717 IQCDQ96DY2 449 aa19.25■□□□□ 0.67
HMGXB3-201ENST00000502717 ARID5AQ03989 594 aa19.25■□□□□ 0.67
HMGXB3-201ENST00000502717 CC2D1AQ6P1N0 951 aaPredicted RBP19.25■□□□□ 0.67
HMGXB3-201ENST00000502717 CDCA7Q9BWT1 371 aaPredicted RBP19.25■□□□□ 0.67
HMGXB3-201ENST00000502717 C6orf163Q5TEZ5 329 aa19.25■□□□□ 0.67
HMGXB3-201ENST00000502717 ICE2Q659A1 982 aa19.25■□□□□ 0.67
HMGXB3-201ENST00000502717 MTRF1LQ9UGC7 380 aaKnown RBP19.25■□□□□ 0.67
HMGXB3-201ENST00000502717 CLGNO14967 610 aa19.25■□□□□ 0.67
HMGXB3-201ENST00000502717 RNF40O75150 1001 aa19.25■□□□□ 0.67
HMGXB3-201ENST00000502717 MAGEA1P43355 309 aa19.25■□□□□ 0.67
HMGXB3-201ENST00000502717 ZNF710Q8N1W2 664 aa19.25■□□□□ 0.67
HMGXB3-201ENST00000502717 TRIM58Q8NG06 486 aa19.25■□□□□ 0.67
HMGXB3-201ENST00000502717 A0A087WWV3 80 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 PPP6R2O75170 966 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 E7EVH7 732 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 BAG6P46379 1132 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 PPP2R5BQ15173 497 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 CEP85LQ5SZL2 805 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 NBPF6Q5VWK0 638 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 NBPF5PQ86XG9 351 aaPredicted RBP19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 SLC35F6Q8N357 371 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 NELFBQ8WX92 580 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 NBPF4Q96M43 638 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 CRNKL1Q9BZJ0 848 aaKnown RBP19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 ERCC5P28715 1186 aaPredicted RBP19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 WDR78Q5VTH9 848 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 MED14O60244 1454 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 KDRP35968 1356 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 BUB1BO60566 1050 aaPredicted RBP19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 FMNL3Q8IVF7 1028 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 NOSTRINQ8IVI9 506 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 PAF1Q8N7H5 531 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 HAUS7Q99871 368 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 MAPK8IP1Q9UQF2 711 aa19.24■□□□□ 0.67
HMGXB3-201ENST00000502717 A0A1W2PRG0 241 aa19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 TBC1D5Q92609 795 aa19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 USP27XA6NNY8 438 aa19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 APBA1Q02410 837 aa19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 SPTY2D1Q68D10 685 aaPredicted RBP19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 RGS22Q8NE09 1264 aa19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 SEC62Q99442 399 aaKnown RBP19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 LGR6Q9HBX8 967 aa19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 LRRIQ1Q96JM4 1722 aa19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 HSPD1P10809 573 aaKnown RBP19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 CYP2C19P33261 490 aa19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 TTC38Q5R3I4 469 aa19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 ZNF790Q6PG37 636 aa19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 PGBD1Q96JS3 809 aa19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 LAMC1P11047 1609 aa19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 CARMIL3Q8ND23 1372 aa19.23■□□□□ 0.67
HMGXB3-201ENST00000502717 CYP21A2P08686 494 aa19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 KRT13P13646 458 aa19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 SARNPP82979 210 aaKnown RBP19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 SMARCC2Q8TAQ2 1214 aa19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 EPN1Q9Y6I3 576 aaPredicted RBP19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 IL17REQ8NFR9 667 aa19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 FTOQ9C0B1 505 aaKnown RBP eCLIP19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 POLA2Q14181 598 aa19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 CASP8Q14790 479 aa19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 VIMP08670 466 aaKnown RBP19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 MAP3K9P80192 1104 aa19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 MTMR3Q13615 1198 aa19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 HEATR3Q7Z4Q2 680 aa19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 CROCCP2Q86T23 111 aa19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 MAGEB6Q8N7X4 407 aa19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 PLBD2Q8NHP8 589 aa19.22■□□□□ 0.67
HMGXB3-201ENST00000502717 LDHCP07864 332 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 STXBP4Q6ZWJ1 553 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 CERS3Q8IU89 383 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 PCDH11XQ9BZA7 1347 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 PCDH11YQ9BZA8 1340 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 PDE4DQ08499 809 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 GOLGA8FQ08AF8 430 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 GOLGA8DPQ0D2H9 430 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 HOOK3Q86VS8 718 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 BANK1Q8NDB2 785 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 BPIFA3Q9BQP9 254 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 CPSF2Q9P2I0 782 aaKnown RBP19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 ZKSCAN3Q9BRR0 538 aa19.21■□□□□ 0.67
HMGXB3-201ENST00000502717 IFIH1Q9BYX4 1025 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms