RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 JAKMIP1Q96N16 626 aaKnown RBP16.05■□□□□ 0.16
CPNE1-227ENST00000498056 GBA2Q9HCG7 927 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-227ENST00000498056 TSPY3P0CV98 308 aa16.04■□□□□ 0.16
CPNE1-227ENST00000498056 TSPY8P0CW00 308 aa16.04■□□□□ 0.16
CPNE1-227ENST00000498056 AKR1B1P15121 316 aa16.04■□□□□ 0.16
CPNE1-227ENST00000498056 INPP5BP32019 993 aa16.04■□□□□ 0.16
CPNE1-227ENST00000498056 FSTL1Q12841 308 aa16.04■□□□□ 0.16
CPNE1-227ENST00000498056 SHROOM1Q2M3G4 852 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-227ENST00000498056 CERKLQ49MI3 558 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-227ENST00000498056 FAM47AQ5JRC9 791 aa16.04■□□□□ 0.16
CPNE1-227ENST00000498056 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.04■□□□□ 0.16
CPNE1-227ENST00000498056 ESR2Q92731 530 aa16.04■□□□□ 0.16
CPNE1-227ENST00000498056 KRT23Q9C075 422 aa16.04■□□□□ 0.16
CPNE1-227ENST00000498056 TAOK2Q9UL54 1235 aa16.04■□□□□ 0.16
CPNE1-227ENST00000498056 KDM4AO75164 1064 aa16.03■□□□□ 0.16
CPNE1-227ENST00000498056 ABCB5Q2M3G0 1257 aa16.03■□□□□ 0.16
CPNE1-227ENST00000498056 ADCK5Q3MIX3 580 aa16.03■□□□□ 0.16
CPNE1-227ENST00000498056 TATDN1Q6P1N9 297 aa16.03■□□□□ 0.16
CPNE1-227ENST00000498056 ZNF444Q8N0Y2 327 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-227ENST00000498056 KLRG1Q96E93 195 aa16.03■□□□□ 0.16
CPNE1-227ENST00000498056 TBC1D32Q96NH3 1257 aa16.03■□□□□ 0.16
CPNE1-227ENST00000498056 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-227ENST00000498056 ZBTB21Q9ULJ3 1066 aa16.03■□□□□ 0.16
CPNE1-227ENST00000498056 CSADQ9Y600 493 aa16.03■□□□□ 0.16
CPNE1-227ENST00000498056 MYH6P13533 1939 aa16.02■□□□□ 0.16
CPNE1-227ENST00000498056 PHF20L1A8MW92 1017 aa16.02■□□□□ 0.16
CPNE1-227ENST00000498056 USP2O75604 605 aaPredicted RBP16.02■□□□□ 0.16
CPNE1-227ENST00000498056 GH2P01242 217 aa16.02■□□□□ 0.16
CPNE1-227ENST00000498056 CASTP20810 708 aaKnown RBP16.02■□□□□ 0.16
CPNE1-227ENST00000498056 VGLL4Q14135 290 aa16.02■□□□□ 0.16
CPNE1-227ENST00000498056 RRP1BQ14684 758 aaKnown RBP16.02■□□□□ 0.16
CPNE1-227ENST00000498056 CLEC10AQ8IUN9 316 aa16.02■□□□□ 0.16
CPNE1-227ENST00000498056 SCYL3Q8IZE3 742 aa16.02■□□□□ 0.16
CPNE1-227ENST00000498056 C2orf69Q8N8R5 385 aa16.02■□□□□ 0.16
CPNE1-227ENST00000498056 KCNB2Q92953 911 aa16.02■□□□□ 0.16
CPNE1-227ENST00000498056 ZKSCAN4Q969J2 545 aaPredicted RBP16.02■□□□□ 0.16
CPNE1-227ENST00000498056 CABP5Q9NP86 173 aa16.02■□□□□ 0.16
CPNE1-227ENST00000498056 PARP14Q460N5 1801 aa16.02■□□□□ 0.16
CPNE1-227ENST00000498056 CPA1P15085 419 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 CAP2P40123 477 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 RBM25P49756 843 aaKnown RBP16.01■□□□□ 0.15
CPNE1-227ENST00000498056 ANAPC15P60006 121 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 FKBP1BP68106 108 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 TFAP4Q01664 338 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 MAP3K10Q02779 954 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 RAB3GAP1Q15042 981 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 TMEM179Q6ZVK1 233 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 MB21D2Q8IYB1 491 aaPredicted RBP16.01■□□□□ 0.15
CPNE1-227ENST00000498056 ANKRD13AQ8IZ07 590 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 NKX2-3Q8TAU0 364 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 CCDC17Q96LX7 622 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 NEK1Q96PY6 1258 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 ZKSCAN3Q9BRR0 538 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 UBAC1Q9BSL1 405 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 PICK1Q9NRD5 415 aa16.01■□□□□ 0.15
CPNE1-227ENST00000498056 UBE2Q2LH0YL09 131 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 CTNND1O60716 968 aaKnown RBP16■□□□□ 0.15
CPNE1-227ENST00000498056 ASNSP08243 561 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 FGRP09769 529 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 PSMA5P28066 241 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 MAP3K11Q16584 847 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 TSGA10IPQ3SY00 556 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 CST9Q5W186 159 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 BLOC1S2Q6QNY1 142 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 CHST3Q7LGC8 479 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 CCDC84Q86UT8 332 aaPredicted RBP16■□□□□ 0.15
CPNE1-227ENST00000498056 IQCA1Q86XH1 822 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 CLMNQ96JQ2 1002 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 TCEANC2Q96MN5 208 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 UPF3BQ9BZI7 483 aaKnown RBP16■□□□□ 0.15
CPNE1-227ENST00000498056 ELP3Q9H9T3 547 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 ZNF112Q9UJU3 913 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 ABT1Q9ULW3 272 aaKnown RBP16■□□□□ 0.15
CPNE1-227ENST00000498056 SNCAIPQ9Y6H5 919 aa16■□□□□ 0.15
CPNE1-227ENST00000498056 TNKSO95271 1327 aa15.99■□□□□ 0.15
CPNE1-227ENST00000498056 PRC1O43663 620 aa15.99■□□□□ 0.15
CPNE1-227ENST00000498056 NMT2O60551 498 aa15.99■□□□□ 0.15
CPNE1-227ENST00000498056 MCM5P33992 734 aa15.99■□□□□ 0.15
CPNE1-227ENST00000498056 HUNKP57058 714 aa15.99■□□□□ 0.15
CPNE1-227ENST00000498056 JAG1P78504 1218 aa15.99■□□□□ 0.15
CPNE1-227ENST00000498056 MAP3K9P80192 1104 aa15.99■□□□□ 0.15
CPNE1-227ENST00000498056 ATP2B2Q01814 1243 aa15.99■□□□□ 0.15
CPNE1-227ENST00000498056 ICA1Q05084 483 aa15.99■□□□□ 0.15
CPNE1-227ENST00000498056 COL9A3Q14050 684 aaPredicted RBP15.99■□□□□ 0.15
CPNE1-227ENST00000498056 SEPT2Q15019 361 aa15.99■□□□□ 0.15
CPNE1-227ENST00000498056 NOL9Q5SY16 702 aaKnown RBP15.99■□□□□ 0.15
CPNE1-227ENST00000498056 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.99■□□□□ 0.15
CPNE1-227ENST00000498056 CYB5R4Q7L1T6 521 aa15.99■□□□□ 0.15
CPNE1-227ENST00000498056 TMEM88BA6NKF7 163 aa15.98■□□□□ 0.15
CPNE1-227ENST00000498056 HMGB1P09429 215 aaKnown RBP15.98■□□□□ 0.15
CPNE1-227ENST00000498056 NT5C2P49902 561 aa15.98■□□□□ 0.15
CPNE1-227ENST00000498056 ANTXR2P58335 489 aa15.98■□□□□ 0.15
CPNE1-227ENST00000498056 SART3Q15020 963 aaKnown RBP15.98■□□□□ 0.15
CPNE1-227ENST00000498056 NEDD1Q8NHV4 660 aa15.98■□□□□ 0.15
CPNE1-227ENST00000498056 CEP95Q96GE4 821 aa15.98■□□□□ 0.15
CPNE1-227ENST00000498056 LRRC2Q9BYS8 371 aa15.98■□□□□ 0.15
CPNE1-227ENST00000498056 ZSWIM5Q9P217 1185 aa15.98■□□□□ 0.15
CPNE1-227ENST00000498056 COL11A1P12107 1806 aaPredicted RBP15.97■□□□□ 0.15
CPNE1-227ENST00000498056 ERICH2A1L162 156 aa15.97■□□□□ 0.15
CPNE1-227ENST00000498056 RPS6KB1P23443 525 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms