RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 BHLHE22Q8NFJ8 381 aaPredicted RBP5.79□□□□□ -1.48
PSPC1-205ENST00000497722 HRASLS5Q96KN8 279 aa5.79□□□□□ -1.48
PSPC1-205ENST00000497722 KRTAP9-3Q9BYQ3 159 aa5.79□□□□□ -1.48
PSPC1-205ENST00000497722 GTF2IRD1Q9UHL9 959 aa5.79□□□□□ -1.48
PSPC1-205ENST00000497722 TACC3Q9Y6A5 838 aa5.79□□□□□ -1.48
PSPC1-205ENST00000497722 CARMIL2Q6F5E8 1435 aa5.79□□□□□ -1.48
PSPC1-205ENST00000497722 RBAK-RBAKDNI3L0D1 243 aa5.78□□□□□ -1.48
PSPC1-205ENST00000497722 TFE3P19532 575 aaPredicted RBP5.78□□□□□ -1.48
PSPC1-205ENST00000497722 ST13P50502 369 aaKnown RBP5.78□□□□□ -1.48
PSPC1-205ENST00000497722 SEPT6Q14141 434 aa5.78□□□□□ -1.48
PSPC1-205ENST00000497722 CDC37L1Q7L3B6 337 aa5.78□□□□□ -1.48
PSPC1-205ENST00000497722 TMC4Q7Z404 712 aa5.78□□□□□ -1.48
PSPC1-205ENST00000497722 FOXQ1Q9C009 403 aa5.78□□□□□ -1.48
PSPC1-205ENST00000497722 MAPK8IP1Q9UQF2 711 aa5.78□□□□□ -1.48
PSPC1-205ENST00000497722 USP31Q70CQ4 1352 aa5.78□□□□□ -1.48
PSPC1-205ENST00000497722 PITPNM2Q9BZ72 1349 aa5.77□□□□□ -1.49
PSPC1-205ENST00000497722 PRAMEF27A3QJZ7 478 aa5.77□□□□□ -1.49
PSPC1-205ENST00000497722 ITIH2P19823 946 aa5.77□□□□□ -1.49
PSPC1-205ENST00000497722 ATG4DQ86TL0 474 aaPredicted RBP5.77□□□□□ -1.49
PSPC1-205ENST00000497722 HID1Q8IV36 788 aa5.77□□□□□ -1.49
PSPC1-205ENST00000497722 RIN3Q8TB24 985 aa5.77□□□□□ -1.49
PSPC1-205ENST00000497722 TOX2Q96NM4 488 aa5.77□□□□□ -1.49
PSPC1-205ENST00000497722 NOC4LQ9BVI4 516 aaKnown RBP5.77□□□□□ -1.49
PSPC1-205ENST00000497722 PICK1Q9NRD5 415 aa5.77□□□□□ -1.49
PSPC1-205ENST00000497722 PRR33A8MZF0 331 aa5.76□□□□□ -1.49
PSPC1-205ENST00000497722 CST3P01034 146 aaPredicted RBP5.76□□□□□ -1.49
PSPC1-205ENST00000497722 GRK4P32298 578 aa5.76□□□□□ -1.49
PSPC1-205ENST00000497722 CLCN7P51798 805 aa5.76□□□□□ -1.49
PSPC1-205ENST00000497722 TAGLNQ01995 201 aaKnown RBP5.76□□□□□ -1.49
PSPC1-205ENST00000497722 TAF1CQ15572 869 aaPredicted RBP5.76□□□□□ -1.49
PSPC1-205ENST00000497722 MFSD2AQ8NA29 543 aa5.76□□□□□ -1.49
PSPC1-205ENST00000497722 LRRN4CLQ8ND94 238 aa5.76□□□□□ -1.49
PSPC1-205ENST00000497722 PHC3Q8NDX5 983 aa5.76□□□□□ -1.49
PSPC1-205ENST00000497722 TMEM40Q8WWA1 233 aa5.76□□□□□ -1.49
PSPC1-205ENST00000497722 FAM168AQ92567 244 aa5.76□□□□□ -1.49
PSPC1-205ENST00000497722 GZF1Q9H116 711 aaPredicted RBP5.76□□□□□ -1.49
PSPC1-205ENST00000497722 PRDM5Q9NQX1 630 aaPredicted RBP5.76□□□□□ -1.49
PSPC1-205ENST00000497722 SEMA3GQ9NS98 782 aa5.76□□□□□ -1.49
PSPC1-205ENST00000497722 ANGEL2Q5VTE6 544 aaKnown RBP5.75□□□□□ -1.49
PSPC1-205ENST00000497722 SLC23A3Q6PIS1 610 aa5.75□□□□□ -1.49
PSPC1-205ENST00000497722 ARHGAP27Q6ZUM4 889 aa5.75□□□□□ -1.49
PSPC1-205ENST00000497722 MRPL41Q8IXM3 137 aaKnown RBP5.75□□□□□ -1.49
PSPC1-205ENST00000497722 ASB11Q8WXH4 323 aa5.75□□□□□ -1.49
PSPC1-205ENST00000497722 FAM84AQ96KN4 292 aa5.75□□□□□ -1.49
PSPC1-205ENST00000497722 FAM161BQ96MY7 647 aa5.75□□□□□ -1.49
PSPC1-205ENST00000497722 TJP2Q9UDY2 1190 aa5.75□□□□□ -1.49
PSPC1-205ENST00000497722 TLR6Q9Y2C9 796 aa5.75□□□□□ -1.49
PSPC1-205ENST00000497722 ST14Q9Y5Y6 855 aa5.75□□□□□ -1.49
PSPC1-205ENST00000497722 BUD31P41223 144 aaPredicted RBP5.74□□□□□ -1.49
PSPC1-205ENST00000497722 ETF1P62495 437 aaKnown RBP5.74□□□□□ -1.49
PSPC1-205ENST00000497722 PSMD2Q13200 908 aa5.74□□□□□ -1.49
PSPC1-205ENST00000497722 MAP3K11Q16584 847 aa5.74□□□□□ -1.49
PSPC1-205ENST00000497722 TSNAXIP1Q2TAA8 658 aa5.74□□□□□ -1.49
PSPC1-205ENST00000497722 PRAMEF13Q5VWM6 474 aa5.74□□□□□ -1.49
PSPC1-205ENST00000497722 LETMD1Q6P1Q0 360 aa5.74□□□□□ -1.49
PSPC1-205ENST00000497722 CCDC84Q86UT8 332 aaPredicted RBP5.74□□□□□ -1.49
PSPC1-205ENST00000497722 FLAD1Q8NFF5 587 aa5.74□□□□□ -1.49
PSPC1-205ENST00000497722 ZSCAN18Q8TBC5 510 aaPredicted RBP5.74□□□□□ -1.49
PSPC1-205ENST00000497722 PI4K2BQ8TCG2 481 aa5.74□□□□□ -1.49
PSPC1-205ENST00000497722 MIPEPQ99797 713 aa5.74□□□□□ -1.49
PSPC1-205ENST00000497722 RC3H2Q9HBD1 1191 aaKnown RBP5.74□□□□□ -1.49
PSPC1-205ENST00000497722 CAPN6Q9Y6Q1 641 aa5.74□□□□□ -1.49
PSPC1-205ENST00000497722 FAM221AA4D161 298 aa5.73□□□□□ -1.49
PSPC1-205ENST00000497722 RLBP1P12271 317 aa5.73□□□□□ -1.49
PSPC1-205ENST00000497722 RPL6Q02878 288 aaKnown RBP5.73□□□□□ -1.49
PSPC1-205ENST00000497722 MIR1-1HGQ9H1L0 117 aa5.73□□□□□ -1.49
PSPC1-205ENST00000497722 PRDM7Q9NQW5 492 aa5.73□□□□□ -1.49
PSPC1-205ENST00000497722 LMCD1Q9NZU5 365 aa5.73□□□□□ -1.49
PSPC1-205ENST00000497722 RAPGEFL1Q9UHV5 662 aa5.73□□□□□ -1.49
PSPC1-205ENST00000497722 GNAT3A8MTJ3 354 aa5.72□□□□□ -1.49
PSPC1-205ENST00000497722 CILPO75339 1184 aa5.72□□□□□ -1.49
PSPC1-205ENST00000497722 TRIM26Q12899 539 aaPredicted RBP5.72□□□□□ -1.49
PSPC1-205ENST00000497722 SFRP5Q5T4F7 317 aa5.72□□□□□ -1.49
PSPC1-205ENST00000497722 SLC6A19Q695T7 634 aa5.72□□□□□ -1.49
PSPC1-205ENST00000497722 MCATQ8IVS2 390 aaKnown RBP5.72□□□□□ -1.49
PSPC1-205ENST00000497722 MFSD4AQ8N468 514 aa5.72□□□□□ -1.49
PSPC1-205ENST00000497722 DNAJB8Q8NHS0 232 aa5.72□□□□□ -1.49
PSPC1-205ENST00000497722 ACSF2Q96CM8 615 aaPredicted RBP5.72□□□□□ -1.49
PSPC1-205ENST00000497722 CRELD1Q96HD1 420 aa5.72□□□□□ -1.49
PSPC1-205ENST00000497722 TMEM87BQ96K49 555 aa5.72□□□□□ -1.49
PSPC1-205ENST00000497722 RHOVQ96L33 236 aa5.72□□□□□ -1.49
PSPC1-205ENST00000497722 HSPA12BQ96MM6 686 aa5.72□□□□□ -1.49
PSPC1-205ENST00000497722 ADAM30Q9UKF2 790 aa5.72□□□□□ -1.49
PSPC1-205ENST00000497722 LMNB2Q03252 620 aa5.71□□□□□ -1.5
PSPC1-205ENST00000497722 ZP2Q05996 745 aa5.71□□□□□ -1.5
PSPC1-205ENST00000497722 IKZF1Q13422 519 aa5.71□□□□□ -1.5
PSPC1-205ENST00000497722 TMCO4Q5TGY1 634 aa5.71□□□□□ -1.5
PSPC1-205ENST00000497722 BNC2Q6ZN30 1099 aaPredicted RBP5.71□□□□□ -1.5
PSPC1-205ENST00000497722 CILP2Q8IUL8 1156 aa5.71□□□□□ -1.5
PSPC1-205ENST00000497722 SIAH1Q8IUQ4 282 aa5.71□□□□□ -1.5
PSPC1-205ENST00000497722 PPP1R13LQ8WUF5 828 aa5.71□□□□□ -1.5
PSPC1-205ENST00000497722 RSRP1Q9BUV0 290 aa5.71□□□□□ -1.5
PSPC1-205ENST00000497722 ATP13A1Q9HD20 1204 aa5.71□□□□□ -1.5
PSPC1-205ENST00000497722 C19orf73Q9NVV2 129 aa5.71□□□□□ -1.5
PSPC1-205ENST00000497722 TPX2Q9ULW0 747 aaKnown RBP5.71□□□□□ -1.5
PSPC1-205ENST00000497722 CTNND2Q9UQB3 1225 aa5.71□□□□□ -1.5
PSPC1-205ENST00000497722 PRR36Q9H6K5 1346 aa5.71□□□□□ -1.5
PSPC1-205ENST00000497722 PGRP06401 933 aa5.7□□□□□ -1.5
PSPC1-205ENST00000497722 ERCC3P19447 782 aa5.7□□□□□ -1.5
PSPC1-205ENST00000497722 GARTP22102 1010 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms