RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 PGBD1Q96JS3 809 aa13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 SENP2Q9HC62 589 aa13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 SLC12A7Q9Y666 1083 aa13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 MRVI1Q9Y6F6 885 aa13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 GOLGA8AA7E2F4 631 aa13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 NPHP1O15259 732 aa13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 DYNLL1P63167 89 aaKnown RBP13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 TYRO3Q06418 890 aa13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 POLR3EQ9NVU0 708 aa13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 DACT1Q9NYF0 836 aa13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 MKRN1Q9UHC7 482 aaKnown RBP13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 CEP83Q9Y592 693 aa13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 CCDC69A6NI79 296 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 CDC27P30260 824 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 SEMA3FQ13275 785 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 WTAPQ15007 396 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 ANO6Q4KMQ2 910 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 NLGN1Q8N2Q7 840 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 SDR42E1Q8WUS8 393 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 WASF1Q92558 559 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 NUP62CLQ9H1M0 184 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 ANKIB1Q9P2G1 1089 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 YEATS4O95619 227 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 KIF23Q02241 960 aaPredicted RBP13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 MAP3K11Q16584 847 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 SP8Q8IXZ3 490 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 FAM200AQ8TCP9 573 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 CLSTN2Q9H4D0 955 aa13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 DCP1AQ9NPI6 582 aaPredicted RBP13.34□□□□□ -0.27
SNRNP200-208ENST00000497539 FAM205AQ6ZU69 1335 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 CCDC196A0A1B0GTZ2 297 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 ERICH2A1L162 156 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 GOLGA6L6A8MZA4 724 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 RANBP6O60518 1105 aaKnown RBP13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 PRDX5P30044 214 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 ZNF827Q17R98 1081 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 TRIM5Q9C035 493 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 CBX8Q9HC52 389 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 INCENPQ9NQS7 918 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 GGA1Q9UJY5 639 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 MYH2Q9UKX2 1941 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 A0A1W2PQ27 194 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 A0A1W2PQ64 194 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 A0A1W2PQD8 194 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 SYNE3Q6ZMZ3 975 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 NFXL1Q6ZNB6 911 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 EP400NLQ6ZTU2 488 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 MYCBPQ99417 103 aaPredicted RBP13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 TNMDQ9H2S6 317 aa13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 ZNF646O15015 1829 aaPredicted RBP13.33□□□□□ -0.28
SNRNP200-208ENST00000497539 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 GPATCH11Q8N954 259 aa13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 ZBTB9Q96C00 473 aa13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 FAM163AQ96GL9 167 aaPredicted RBP13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 USP28Q96RU2 1077 aa13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 ZSCAN10Q96SZ4 725 aaPredicted RBP13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 GOLGA6L4A6NEF3 574 aa13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 DDAH1O94760 285 aa13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 LDHBP07195 334 aaKnown RBP13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 LDHCP07864 332 aa13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 IARSP41252 1262 aaKnown RBP13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 MAP2K1Q02750 393 aaPredicted RBP13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 ALG1Q9BT22 464 aa13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 CD209Q9NNX6 404 aa13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 MORC2Q9Y6X9 1032 aaPredicted RBP13.32□□□□□ -0.28
SNRNP200-208ENST00000497539 MROH7-TTC4A0A0A0MT08 1334 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 MAFGO15525 162 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 SLC3A2P08195 630 aaKnown RBP13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 CALM1P0DP23 149 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 CALM2P0DP24 149 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 CALM3P0DP25 149 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 RTN1Q16799 776 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 MYSM1Q5VVJ2 828 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 DZIP1Q86YF9 867 aaKnown RBP13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 ZNF654Q8IZM8 581 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 ANKRD7Q92527 254 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 UBAC1Q9BSL1 405 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 TNKSO95271 1327 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 SSRP1Q08945 709 aaKnown RBP13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 MICU3Q86XE3 530 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 TBC1D16Q8TBP0 767 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 KCNG4Q8TDN1 519 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 TBC1D22AQ8WUA7 517 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 ANKS1AQ92625 1134 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 NCAPGQ9BPX3 1015 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 DNAJC25Q9H1X3 360 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 SUGT1Q9Y2Z0 365 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 ATP6V0A2Q9Y487 856 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 GAKO14976 1311 aa13.31□□□□□ -0.28
SNRNP200-208ENST00000497539 MYH6P13533 1939 aa13.3□□□□□ -0.28
SNRNP200-208ENST00000497539 CTAGE5O15320 804 aa13.3□□□□□ -0.28
SNRNP200-208ENST00000497539 UFL1O94874 794 aa13.3□□□□□ -0.28
SNRNP200-208ENST00000497539 CEBPZQ03701 1054 aaKnown RBP13.3□□□□□ -0.28
SNRNP200-208ENST00000497539 GABPB1Q06547 395 aaPredicted RBP13.3□□□□□ -0.28
SNRNP200-208ENST00000497539 NCBP1Q09161 790 aaKnown RBP13.3□□□□□ -0.28
SNRNP200-208ENST00000497539 NBPF9Q3BBW0 867 aa13.3□□□□□ -0.28
SNRNP200-208ENST00000497539 CT47A1Q5JQC4 288 aaPredicted RBP13.3□□□□□ -0.28
SNRNP200-208ENST00000497539 ZNF771Q7L3S4 317 aaPredicted RBP13.3□□□□□ -0.28
SNRNP200-208ENST00000497539 COL23A1Q86Y22 540 aaPredicted RBP13.3□□□□□ -0.28
SNRNP200-208ENST00000497539 LINC00301Q8NCQ3 95 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms