RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.71□□□□□ -1.02
CHCHD3-206ENST00000496427 KCNH4Q9UQ05 1017 aa8.71□□□□□ -1.02
CHCHD3-206ENST00000496427 DAGLAQ9Y4D2 1042 aa8.71□□□□□ -1.02
CHCHD3-206ENST00000496427 MAST3O60307 1309 aa8.71□□□□□ -1.02
CHCHD3-206ENST00000496427 ZBTB7BO15156 539 aaPredicted RBP8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 FARP2O94887 1054 aaPredicted RBP8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 GJB1P08034 283 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 BCRP11274 1271 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 ELNP15502 786 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 PRDX5P30044 214 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 E2F4Q16254 413 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 RABL6Q3YEC7 729 aaPredicted RBP8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 GPAT2Q6NUI2 795 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 CDC42EP5Q6NZY7 148 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 GADL1Q6ZQY3 521 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 CCDC84Q86UT8 332 aaPredicted RBP8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 WDR63Q8IWG1 891 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 ZFPM1Q8IX07 1006 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 U2AF1L4Q8WU68 220 aaKnown RBP8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 FAM151AQ8WW52 585 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 HTATIP2Q9BUP3 242 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 ZNF112Q9UJU3 913 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 MAST2Q6P0Q8 1798 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 ATRNL1Q5VV63 1379 aa8.7□□□□□ -1.02
CHCHD3-206ENST00000496427 GRXCR2A6NFK2 248 aa8.69□□□□□ -1.02
CHCHD3-206ENST00000496427 FGFR2P21802 821 aa8.69□□□□□ -1.02
CHCHD3-206ENST00000496427 HOXD10P28358 340 aa8.69□□□□□ -1.02
CHCHD3-206ENST00000496427 FCGRTP55899 365 aa8.69□□□□□ -1.02
CHCHD3-206ENST00000496427 UBXN2AP68543 259 aa8.69□□□□□ -1.02
CHCHD3-206ENST00000496427 NOL9Q5SY16 702 aaKnown RBP8.69□□□□□ -1.02
CHCHD3-206ENST00000496427 FKBP1CQ5VVH2 108 aa8.69□□□□□ -1.02
CHCHD3-206ENST00000496427 HHIPL2Q6UWX4 724 aa8.69□□□□□ -1.02
CHCHD3-206ENST00000496427 NKX2-3Q8TAU0 364 aa8.69□□□□□ -1.02
CHCHD3-206ENST00000496427 HOOK2Q96ED9 719 aa8.69□□□□□ -1.02
CHCHD3-206ENST00000496427 PARK7Q99497 189 aaKnown RBP8.69□□□□□ -1.02
CHCHD3-206ENST00000496427 MRS2Q9HD23 443 aa8.69□□□□□ -1.02
CHCHD3-206ENST00000496427 UTYO14607 1347 aa8.69□□□□□ -1.02
CHCHD3-206ENST00000496427 MYH1P12882 1939 aa8.68□□□□□ -1.02
CHCHD3-206ENST00000496427 DLL1O00548 723 aa8.68□□□□□ -1.02
CHCHD3-206ENST00000496427 ADCY3O60266 1144 aa8.68□□□□□ -1.02
CHCHD3-206ENST00000496427 INHAP05111 366 aa8.68□□□□□ -1.02
CHCHD3-206ENST00000496427 IFIT1P09914 478 aaKnown RBP8.68□□□□□ -1.02
CHCHD3-206ENST00000496427 ZEB1P37275 1124 aaPredicted RBP8.68□□□□□ -1.02
CHCHD3-206ENST00000496427 FLT3LGP49771 235 aa8.68□□□□□ -1.02
CHCHD3-206ENST00000496427 PUM3Q15397 648 aaKnown RBP8.68□□□□□ -1.02
CHCHD3-206ENST00000496427 SLC17A8Q8NDX2 589 aa8.68□□□□□ -1.02
CHCHD3-206ENST00000496427 DIS3LQ8TF46 1054 aaKnown RBP8.68□□□□□ -1.02
CHCHD3-206ENST00000496427 RFX7Q2KHR2 1363 aa8.68□□□□□ -1.02
CHCHD3-206ENST00000496427 A0A0G2JLL6 359 aaPredicted RBP8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 C3orf80F5H4A9 247 aa8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 SGPL1O95470 568 aa8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 SLC5A1P13866 664 aa8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 RFX5P48382 616 aaPredicted RBP8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 RGS3P49796 1198 aa8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 SH3BP5LQ7L8J4 393 aa8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 PRRT2Q7Z6L0 340 aaPredicted RBP8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 BBXQ8WY36 941 aaPredicted RBP8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 KIF16BQ96L93 1317 aa8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 DEFB118Q96PH6 123 aa8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 MRIQ9BWK5 157 aa8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 SIL1Q9H173 461 aa8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 USP40Q9NVE5 1235 aa8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 STAP2Q9UGK3 403 aa8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 SUGT1Q9Y2Z0 365 aa8.67□□□□□ -1.02
CHCHD3-206ENST00000496427 LTBP2Q14767 1821 aa8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 DDTLA6NHG4 134 aaPredicted RBP8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 FAM196BA6NMK8 535 aa8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 PHF20L1A8MW92 1017 aa8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 EYA2O00167 538 aa8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 TNPO2O14787 897 aaKnown RBP8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 PTPRAP18433 802 aa8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 PHKA1P46020 1223 aa8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 ATG9AQ7Z3C6 839 aa8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 SCYL3Q8IZE3 742 aa8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 WDR66Q8TBY9 1149 aa8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 PAWRQ96IZ0 340 aaKnown RBP8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 DDX4Q9NQI0 724 aaKnown RBP8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 ZMYND8Q9ULU4 1186 aaPredicted RBP8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 NR2E3Q9Y5X4 410 aa8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 ZHX2Q9Y6X8 837 aa8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 MYH8P13535 1937 aa8.66□□□□□ -1.02
CHCHD3-206ENST00000496427 TRIM75PA6NK02 468 aa8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 CXCL11O14625 94 aa8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 TFRCP02786 760 aaKnown RBP8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 LDHBP07195 334 aaKnown RBP8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 ADORA1P30542 326 aa8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 TRIM32Q13049 653 aa8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 PICALMQ13492 652 aa8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 ATP2B3Q16720 1220 aa8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 TREML2Q5T2D2 321 aa8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 SWT1Q5T5J6 900 aaKnown RBP8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 Q7L0L9 218 aa8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 ZSCAN29Q8IWY8 852 aaPredicted RBP8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 C7orf61Q8IZ16 206 aa8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 ANKRD13CQ8N6S4 541 aa8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 TTC13Q8NBP0 860 aa8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 SMCR8Q8TEV9 937 aaPredicted RBP8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 LPIN2Q92539 896 aa8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 USP44Q9H0E7 712 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms