RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 CPLX1O14810 134 aa24.6■■□□□ 1.53
FGFR1-223ENST00000496296 HDLBPQ00341 1268 aaKnown RBP24.6■■□□□ 1.53
FGFR1-223ENST00000496296 APOA5Q6Q788 366 aa24.6■■□□□ 1.53
FGFR1-223ENST00000496296 PGBD1Q96JS3 809 aa24.6■■□□□ 1.53
FGFR1-223ENST00000496296 ZKSCAN3Q9BRR0 538 aa24.6■■□□□ 1.53
FGFR1-223ENST00000496296 NUP62CLQ9H1M0 184 aa24.6■■□□□ 1.53
FGFR1-223ENST00000496296 ZNF287Q9HBT7 754 aa24.6■■□□□ 1.53
FGFR1-223ENST00000496296 NOL7Q9UMY1 257 aaKnown RBP24.6■■□□□ 1.53
FGFR1-223ENST00000496296 FLT1P17948 1338 aa24.59■■□□□ 1.53
FGFR1-223ENST00000496296 SMIM22K7EJ46 135 aa24.59■■□□□ 1.53
FGFR1-223ENST00000496296 ZBTB43O43298 467 aa24.59■■□□□ 1.53
FGFR1-223ENST00000496296 PRDM1O75626 825 aa24.59■■□□□ 1.53
FGFR1-223ENST00000496296 METAP2P50579 478 aaKnown RBP eCLIP24.59■■□□□ 1.53
FGFR1-223ENST00000496296 KIAA0825Q8IV33 1275 aa24.59■■□□□ 1.53
FGFR1-223ENST00000496296 NAV1Q8NEY1 1877 aa24.59■■□□□ 1.53
FGFR1-223ENST00000496296 CRKP46108 304 aa24.58■■□□□ 1.53
FGFR1-223ENST00000496296 ZNF396Q96N95 335 aaPredicted RBP24.58■■□□□ 1.53
FGFR1-223ENST00000496296 ZSCAN10Q96SZ4 725 aaPredicted RBP24.58■■□□□ 1.53
FGFR1-223ENST00000496296 ROBO3Q96MS0 1386 aa24.58■■□□□ 1.53
FGFR1-223ENST00000496296 GOLGA6L4A6NEF3 574 aa24.58■■□□□ 1.52
FGFR1-223ENST00000496296 MAP3K11Q16584 847 aa24.58■■□□□ 1.52
FGFR1-223ENST00000496296 CPLX2Q6PUV4 134 aaKnown RBP24.58■■□□□ 1.52
FGFR1-223ENST00000496296 NLGN2Q8NFZ4 835 aa24.58■■□□□ 1.52
FGFR1-223ENST00000496296 CLSTN2Q9H4D0 955 aa24.58■■□□□ 1.52
FGFR1-223ENST00000496296 ZNF277Q9NRM2 450 aaPredicted RBP24.58■■□□□ 1.52
FGFR1-223ENST00000496296 CCDC39Q9UFE4 941 aa24.58■■□□□ 1.52
FGFR1-223ENST00000496296 TNKSO95271 1327 aa24.57■■□□□ 1.52
FGFR1-223ENST00000496296 CCDC192P0DO97 292 aa24.57■■□□□ 1.52
FGFR1-223ENST00000496296 SLC4A8Q2Y0W8 1093 aa24.57■■□□□ 1.52
FGFR1-223ENST00000496296 USP40Q9NVE5 1235 aa24.57■■□□□ 1.52
FGFR1-223ENST00000496296 SAP30BPQ9UHR5 308 aaKnown RBP24.57■■□□□ 1.52
FGFR1-223ENST00000496296 MYO3BQ8WXR4 1341 aa24.56■■□□□ 1.52
FGFR1-223ENST00000496296 CDKL5O76039 1030 aa24.56■■□□□ 1.52
FGFR1-223ENST00000496296 MICU3Q86XE3 530 aa24.56■■□□□ 1.52
FGFR1-223ENST00000496296 ZDHHC15Q96MV8 337 aa24.56■■□□□ 1.52
FGFR1-223ENST00000496296 MKNK2Q9HBH9 465 aa24.56■■□□□ 1.52
FGFR1-223ENST00000496296 SENP2Q9HC62 589 aa24.56■■□□□ 1.52
FGFR1-223ENST00000496296 ECM29Q5VYK3 1845 aa24.56■■□□□ 1.52
FGFR1-223ENST00000496296 YDJCA8MPS7 323 aa24.55■■□□□ 1.52
FGFR1-223ENST00000496296 NID2Q14112 1375 aa24.55■■□□□ 1.52
FGFR1-223ENST00000496296 SCN9AQ15858 1988 aa24.55■■□□□ 1.52
FGFR1-223ENST00000496296 TSPY2A6NKD2 308 aa24.55■■□□□ 1.52
FGFR1-223ENST00000496296 GOLGA8AA7E2F4 631 aa24.55■■□□□ 1.52
FGFR1-223ENST00000496296 RBM5P52756 815 aaKnown RBP eCLIP24.55■■□□□ 1.52
FGFR1-223ENST00000496296 RCAN1P53805 252 aa24.55■■□□□ 1.52
FGFR1-223ENST00000496296 RAB11FIP4Q86YS3 637 aa24.55■■□□□ 1.52
FGFR1-223ENST00000496296 NIM1KQ8IY84 436 aa24.55■■□□□ 1.52
FGFR1-223ENST00000496296 DACT1Q9NYF0 836 aa24.55■■□□□ 1.52
FGFR1-223ENST00000496296 SERPINA10Q9UK55 444 aa24.55■■□□□ 1.52
FGFR1-223ENST00000496296 EVX2Q03828 476 aa24.54■■□□□ 1.52
FGFR1-223ENST00000496296 SEC23AQ15436 765 aa24.54■■□□□ 1.52
FGFR1-223ENST00000496296 CDK5RAP2Q96SN8 1893 aa24.53■■□□□ 1.52
FGFR1-223ENST00000496296 IARSP41252 1262 aaKnown RBP24.53■■□□□ 1.52
FGFR1-223ENST00000496296 PICALMQ13492 652 aa24.53■■□□□ 1.52
FGFR1-223ENST00000496296 IFIT1BQ5T764 474 aaKnown RBP24.53■■□□□ 1.52
FGFR1-223ENST00000496296 APOBEC3HQ6NTF7 200 aaKnown RBP24.53■■□□□ 1.52
FGFR1-223ENST00000496296 CDC42EP5Q6NZY7 148 aa24.53■■□□□ 1.52
FGFR1-223ENST00000496296 ZNF444Q8N0Y2 327 aaPredicted RBP24.53■■□□□ 1.52
FGFR1-223ENST00000496296 TAOK3Q9H2K8 898 aa24.53■■□□□ 1.52
FGFR1-223ENST00000496296 PLCD1P51178 756 aa24.53■■□□□ 1.52
FGFR1-223ENST00000496296 CCDC178Q5BJE1 867 aa24.53■■□□□ 1.52
FGFR1-223ENST00000496296 ENAHQ8N8S7 591 aaPredicted RBP24.53■■□□□ 1.52
FGFR1-223ENST00000496296 FBXO18Q8NFZ0 1043 aa24.53■■□□□ 1.52
FGFR1-223ENST00000496296 DYNLL2Q96FJ2 89 aa24.53■■□□□ 1.52
FGFR1-223ENST00000496296 TNMDQ9H2S6 317 aa24.52■■□□□ 1.52
FGFR1-223ENST00000496296 ZNRF3Q9ULT6 936 aa24.52■■□□□ 1.52
FGFR1-223ENST00000496296 CCDC196A0A1B0GTZ2 297 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 WDHD1O75717 1129 aaPredicted RBP24.51■■□□□ 1.51
FGFR1-223ENST00000496296 RXRAP19793 462 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 FAM47AQ5JRC9 791 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 RSBN1LQ6PCB5 846 aaPredicted RBP24.51■■□□□ 1.51
FGFR1-223ENST00000496296 BRAPQ7Z569 592 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 ZNF654Q8IZM8 581 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 USP28Q96RU2 1077 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 RTEL1Q9NZ71 1219 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.51■■□□□ 1.51
FGFR1-223ENST00000496296 ORC3Q9UBD5 711 aaPredicted RBP24.51■■□□□ 1.51
FGFR1-223ENST00000496296 ZKSCAN5Q9Y2L8 839 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 FOCADQ5VW36 1801 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 ZNF500O60304 480 aaPredicted RBP24.51■■□□□ 1.51
FGFR1-223ENST00000496296 PPP2R5BQ15173 497 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 C16orf86Q6ZW13 317 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 CATIPQ7Z7H3 387 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 C8orf76Q96K31 380 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 MYL10Q9BUA6 226 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 BCS1LQ9Y276 419 aa24.51■■□□□ 1.51
FGFR1-223ENST00000496296 ZNF646O15015 1829 aaPredicted RBP24.5■■□□□ 1.51
FGFR1-223ENST00000496296 DDX60LQ5H9U9 1706 aaKnown RBP24.5■■□□□ 1.51
FGFR1-223ENST00000496296 MSNP26038 577 aaKnown RBP24.5■■□□□ 1.51
FGFR1-223ENST00000496296 TFAP4Q01664 338 aa24.5■■□□□ 1.51
FGFR1-223ENST00000496296 CCDC144CPQ8IYA2 1237 aa24.5■■□□□ 1.51
FGFR1-223ENST00000496296 BICD2Q8TD16 824 aa24.5■■□□□ 1.51
FGFR1-223ENST00000496296 NR1I2O75469 434 aa24.49■■□□□ 1.51
FGFR1-223ENST00000496296 RAD17O75943 681 aa24.49■■□□□ 1.51
FGFR1-223ENST00000496296 VIL1P09327 827 aaKnown RBP24.49■■□□□ 1.51
FGFR1-223ENST00000496296 TSPY3P0CV98 308 aa24.49■■□□□ 1.51
FGFR1-223ENST00000496296 TSPY8P0CW00 308 aa24.49■■□□□ 1.51
FGFR1-223ENST00000496296 CALM1P0DP23 149 aa24.49■■□□□ 1.51
FGFR1-223ENST00000496296 CALM2P0DP24 149 aa24.49■■□□□ 1.51
FGFR1-223ENST00000496296 CALM3P0DP25 149 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms