RNA–Protein interactions for RNA: ENST00000495748.5

PTPRK-214, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 746 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-214ENST00000495748 SLURP2P0DP57 97 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 CYP7A1P22680 504 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 MAPK4P31152 587 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 ZAP70P43403 619 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 USP5P45974 858 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 USP14P54578 494 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 MTMR2Q13614 643 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 TTF1Q15361 905 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-214ENST00000495748 USP17L2Q6R6M4 530 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 CHRDL2Q6WN34 429 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 NECAB2Q7Z6G3 386 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 METTL16Q86W50 562 aaKnown RBP9.4□□□□□ -0.9
PTPRK-214ENST00000495748 GPRC5AQ8NFJ5 357 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 SOCS4Q8WXH5 440 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 NUDT12Q9BQG2 462 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 CHMP4BQ9H444 224 aaKnown RBP9.4□□□□□ -0.9
PTPRK-214ENST00000495748 CWC22Q9HCG8 908 aaKnown RBP9.4□□□□□ -0.9
PTPRK-214ENST00000495748 HMX1Q9NP08 348 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-214ENST00000495748 CABP5Q9NP86 173 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 PAK6Q9NQU5 681 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-214ENST00000495748 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-214ENST00000495748 TNNQ9UQP3 1299 aa9.4□□□□□ -0.9
PTPRK-214ENST00000495748 A0A1W2PPC1 479 aa9.39□□□□□ -0.91
PTPRK-214ENST00000495748 ZBTB7BO15156 539 aaPredicted RBP9.39□□□□□ -0.91
PTPRK-214ENST00000495748 HMMRO75330 724 aa9.39□□□□□ -0.91
PTPRK-214ENST00000495748 XRCC5P13010 732 aaKnown RBP9.39□□□□□ -0.91
PTPRK-214ENST00000495748 HERVK_113P62684 666 aa9.39□□□□□ -0.91
PTPRK-214ENST00000495748 CCNA1P78396 465 aa9.39□□□□□ -0.91
PTPRK-214ENST00000495748 P2RX7Q99572 595 aaKnown RBP9.39□□□□□ -0.91
PTPRK-214ENST00000495748 CRISPLD2Q9H0B8 497 aa9.39□□□□□ -0.91
PTPRK-214ENST00000495748 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.39□□□□□ -0.91
PTPRK-214ENST00000495748 CCDC8Q9H0W5 538 aaPredicted RBP9.39□□□□□ -0.91
PTPRK-214ENST00000495748 EHD4Q9H223 541 aa9.39□□□□□ -0.91
PTPRK-214ENST00000495748 SERPINB13Q9UIV8 391 aa9.39□□□□□ -0.91
PTPRK-214ENST00000495748 DBNLQ9UJU6 430 aaKnown RBP9.39□□□□□ -0.91
PTPRK-214ENST00000495748 PALD1Q9ULE6 856 aa9.39□□□□□ -0.91
PTPRK-214ENST00000495748 ZBTB21Q9ULJ3 1066 aa9.39□□□□□ -0.91
PTPRK-214ENST00000495748 PHIPQ8WWQ0 1821 aa9.39□□□□□ -0.91
PTPRK-214ENST00000495748 DOCK3Q8IZD9 2030 aa9.38□□□□□ -0.91
PTPRK-214ENST00000495748 GDF11O95390 407 aa9.38□□□□□ -0.91
PTPRK-214ENST00000495748 RRP1BQ14684 758 aaKnown RBP9.38□□□□□ -0.91
PTPRK-214ENST00000495748 AACSQ86V21 672 aa9.38□□□□□ -0.91
PTPRK-214ENST00000495748 MAGEB6Q8N7X4 407 aa9.38□□□□□ -0.91
PTPRK-214ENST00000495748 EAF2Q96CJ1 260 aaPredicted RBP9.38□□□□□ -0.91
PTPRK-214ENST00000495748 FEZ1Q99689 392 aa9.38□□□□□ -0.91
PTPRK-214ENST00000495748 C1orf115Q9H7X2 142 aa9.38□□□□□ -0.91
PTPRK-214ENST00000495748 PIH1D3Q9NQM4 214 aaKnown RBP9.38□□□□□ -0.91
PTPRK-214ENST00000495748 SAP30BPQ9UHR5 308 aaKnown RBP9.38□□□□□ -0.91
PTPRK-214ENST00000495748 GJD2Q9UKL4 321 aa9.38□□□□□ -0.91
PTPRK-214ENST00000495748 MAST2Q6P0Q8 1798 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 USP17L15C9J2P7 530 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 USP17L13C9JLJ4 530 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 USP17L11C9JVI0 530 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 USP17L18D6R9N7 530 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 USP17L22D6RA61 530 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 USP17L17D6RBQ6 530 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 USP17L19D6RCP7 530 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 USP17L20D6RJB6 530 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 POLR3DP05423 398 aaPredicted RBP9.37□□□□□ -0.91
PTPRK-214ENST00000495748 RGS2P41220 211 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 ERVK-9P63128 1117 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 ERVK-24P63145 666 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 DYNLL1P63167 89 aaKnown RBP9.37□□□□□ -0.91
PTPRK-214ENST00000495748 USP17L24Q0WX57 530 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 CERKLQ49MI3 558 aaPredicted RBP9.37□□□□□ -0.91
PTPRK-214ENST00000495748 CEP85Q6P2H3 762 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 ADGRA1Q86SQ6 560 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 CLASRPQ8N2M8 674 aaKnown RBP9.37□□□□□ -0.91
PTPRK-214ENST00000495748 PAWRQ96IZ0 340 aaKnown RBP9.37□□□□□ -0.91
PTPRK-214ENST00000495748 C12orf42Q96LP6 360 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 CRNKL1Q9BZJ0 848 aaKnown RBP9.37□□□□□ -0.91
PTPRK-214ENST00000495748 NBPF3Q9H094 633 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 DNAJC18Q9H819 358 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 RABGAP1Q9Y3P9 1069 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 ATAD5Q96QE3 1844 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 LOC285556D6RIA3 1793 aa9.37□□□□□ -0.91
PTPRK-214ENST00000495748 MAGEB6P1A0A0J9YX57 407 aa9.36□□□□□ -0.91
PTPRK-214ENST00000495748 GH2P01242 217 aa9.36□□□□□ -0.91
PTPRK-214ENST00000495748 ZKSCAN1P17029 563 aaPredicted RBP9.36□□□□□ -0.91
PTPRK-214ENST00000495748 CYP2B6P20813 491 aa9.36□□□□□ -0.91
PTPRK-214ENST00000495748 ABCB5Q2M3G0 1257 aa9.36□□□□□ -0.91
PTPRK-214ENST00000495748 TATDN1Q6P1N9 297 aa9.36□□□□□ -0.91
PTPRK-214ENST00000495748 PLEKHH3Q7Z736 793 aa9.36□□□□□ -0.91
PTPRK-214ENST00000495748 RPAP2Q8IXW5 612 aaPredicted RBP9.36□□□□□ -0.91
PTPRK-214ENST00000495748 MIGA1Q8NAN2 632 aa9.36□□□□□ -0.91
PTPRK-214ENST00000495748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.36□□□□□ -0.91
PTPRK-214ENST00000495748 KIF1BPQ96EK5 621 aa9.36□□□□□ -0.91
PTPRK-214ENST00000495748 PAGR1Q9BTK6 254 aa9.36□□□□□ -0.91
PTPRK-214ENST00000495748 TLR7Q9NYK1 1049 aaKnown RBP9.36□□□□□ -0.91
PTPRK-214ENST00000495748 RBM27Q9P2N5 1060 aaKnown RBP9.36□□□□□ -0.91
PTPRK-214ENST00000495748 IVNS1ABPQ9Y6Y0 642 aa9.36□□□□□ -0.91
PTPRK-214ENST00000495748 ZBED9Q6R2W3 1325 aa9.35□□□□□ -0.91
PTPRK-214ENST00000495748 IFIT2P09913 472 aaKnown RBP9.35□□□□□ -0.91
PTPRK-214ENST00000495748 RLBP1P12271 317 aa9.35□□□□□ -0.91
PTPRK-214ENST00000495748 PRKAR2AP13861 404 aaKnown RBP9.35□□□□□ -0.91
PTPRK-214ENST00000495748 RAB3GAP1Q15042 981 aa9.35□□□□□ -0.91
PTPRK-214ENST00000495748 MAP3K21Q5TCX8 1036 aa9.35□□□□□ -0.91
PTPRK-214ENST00000495748 MFSD14CQ5VZR4 134 aa9.35□□□□□ -0.91
PTPRK-214ENST00000495748 GPR142Q7Z601 462 aa9.35□□□□□ -0.91
PTPRK-214ENST00000495748 AMOTL1Q8IY63 956 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms