RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 MKNK2Q9HBH9 465 aa14.41□□□□□ -0.1
CSNK1E-213ENST00000495232 AS3MTQ9HBK9 375 aa14.41□□□□□ -0.1
CSNK1E-213ENST00000495232 ZHX2Q9Y6X8 837 aa14.41□□□□□ -0.1
CSNK1E-213ENST00000495232 ATAD5Q96QE3 1844 aa14.41□□□□□ -0.1
CSNK1E-213ENST00000495232 USP17L5A8MUK1 530 aa14.4□□□□□ -0.1
CSNK1E-213ENST00000495232 IRF6O14896 467 aa14.4□□□□□ -0.1
CSNK1E-213ENST00000495232 SHMT1P34896 483 aa14.4□□□□□ -0.1
CSNK1E-213ENST00000495232 GJA5P36382 358 aa14.4□□□□□ -0.1
CSNK1E-213ENST00000495232 GABPAQ06546 454 aa14.4□□□□□ -0.1
CSNK1E-213ENST00000495232 ABCB5Q2M3G0 1257 aa14.4□□□□□ -0.1
CSNK1E-213ENST00000495232 OTUD7BQ6GQQ9 843 aa14.4□□□□□ -0.1
CSNK1E-213ENST00000495232 STK11IPQ8N1F8 1099 aa14.4□□□□□ -0.1
CSNK1E-213ENST00000495232 DYNLL2Q96FJ2 89 aa14.4□□□□□ -0.1
CSNK1E-213ENST00000495232 MYH8P13535 1937 aa14.4□□□□□ -0.1
CSNK1E-213ENST00000495232 THSD7BQ9C0I4 1608 aa14.4□□□□□ -0.1
CSNK1E-213ENST00000495232 RAD50Q92878 1312 aa14.4□□□□□ -0.1
CSNK1E-213ENST00000495232 GH2P01242 217 aa14.39□□□□□ -0.11
CSNK1E-213ENST00000495232 CETPP11597 493 aa14.39□□□□□ -0.11
CSNK1E-213ENST00000495232 TM4SF4P48230 202 aa14.39□□□□□ -0.11
CSNK1E-213ENST00000495232 CDK8P49336 464 aa14.39□□□□□ -0.11
CSNK1E-213ENST00000495232 EVX2Q03828 476 aa14.39□□□□□ -0.11
CSNK1E-213ENST00000495232 PDE4BQ07343 736 aa14.39□□□□□ -0.11
CSNK1E-213ENST00000495232 PPARAQ07869 468 aa14.39□□□□□ -0.11
CSNK1E-213ENST00000495232 RAB3GAP1Q15042 981 aa14.39□□□□□ -0.11
CSNK1E-213ENST00000495232 ALX1Q15699 326 aa14.39□□□□□ -0.11
CSNK1E-213ENST00000495232 C16orf86Q6ZW13 317 aa14.39□□□□□ -0.11
CSNK1E-213ENST00000495232 ZBTB21Q9ULJ3 1066 aa14.39□□□□□ -0.11
CSNK1E-213ENST00000495232 LAMB1P07942 1786 aa14.39□□□□□ -0.11
CSNK1E-213ENST00000495232 CCL15-CCL14A0A0B4J2E2 113 aa14.38□□□□□ -0.11
CSNK1E-213ENST00000495232 TRIM75PA6NK02 468 aa14.38□□□□□ -0.11
CSNK1E-213ENST00000495232 CXCL11O14625 94 aa14.38□□□□□ -0.11
CSNK1E-213ENST00000495232 CA12O43570 354 aa14.38□□□□□ -0.11
CSNK1E-213ENST00000495232 FGAP02671 866 aa14.38□□□□□ -0.11
CSNK1E-213ENST00000495232 RRP1BQ14684 758 aaKnown RBP14.38□□□□□ -0.11
CSNK1E-213ENST00000495232 CCL15Q16663 113 aa14.38□□□□□ -0.11
CSNK1E-213ENST00000495232 ZNF444Q8N0Y2 327 aaPredicted RBP14.38□□□□□ -0.11
CSNK1E-213ENST00000495232 SLC44A5Q8NCS7 719 aa14.38□□□□□ -0.11
CSNK1E-213ENST00000495232 ZNF280CQ8ND82 737 aa14.38□□□□□ -0.11
CSNK1E-213ENST00000495232 CCDC17Q96LX7 622 aa14.38□□□□□ -0.11
CSNK1E-213ENST00000495232 WBP1LQ9NX94 342 aa14.38□□□□□ -0.11
CSNK1E-213ENST00000495232 AFG3L2Q9Y4W6 797 aa14.38□□□□□ -0.11
CSNK1E-213ENST00000495232 ALDH1A1P00352 501 aa14.37□□□□□ -0.11
CSNK1E-213ENST00000495232 HSPA1AP0DMV8 641 aaKnown RBP14.37□□□□□ -0.11
CSNK1E-213ENST00000495232 HSPA1BP0DMV9 641 aaKnown RBP14.37□□□□□ -0.11
CSNK1E-213ENST00000495232 SPP2Q13103 211 aa14.37□□□□□ -0.11
CSNK1E-213ENST00000495232 KIAA1211Q6ZU35 1233 aa14.37□□□□□ -0.11
CSNK1E-213ENST00000495232 DSCC1Q9BVC3 393 aa14.37□□□□□ -0.11
CSNK1E-213ENST00000495232 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.37□□□□□ -0.11
CSNK1E-213ENST00000495232 CTNNA3Q9UI47 895 aa14.37□□□□□ -0.11
CSNK1E-213ENST00000495232 KCNH4Q9UQ05 1017 aa14.37□□□□□ -0.11
CSNK1E-213ENST00000495232 ZMYM6O95789 1325 aa14.37□□□□□ -0.11
CSNK1E-213ENST00000495232 ROBO3Q96MS0 1386 aa14.36□□□□□ -0.11
CSNK1E-213ENST00000495232 SMIM22K7EJ46 135 aa14.36□□□□□ -0.11
CSNK1E-213ENST00000495232 ZNF213O14771 459 aa14.36□□□□□ -0.11
CSNK1E-213ENST00000495232 FOXP2O15409 715 aa14.36□□□□□ -0.11
CSNK1E-213ENST00000495232 SGSM2O43147 1006 aa14.36□□□□□ -0.11
CSNK1E-213ENST00000495232 CDC45O75419 566 aa14.36□□□□□ -0.11
CSNK1E-213ENST00000495232 TMEM179Q6ZVK1 233 aa14.36□□□□□ -0.11
CSNK1E-213ENST00000495232 FASTKD5Q7L8L6 764 aaKnown RBP14.36□□□□□ -0.11
CSNK1E-213ENST00000495232 CCDC84Q86UT8 332 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-213ENST00000495232 IFNL1Q8IU54 200 aa14.36□□□□□ -0.11
CSNK1E-213ENST00000495232 MS4A4AQ96JQ5 239 aa14.36□□□□□ -0.11
CSNK1E-213ENST00000495232 TESPA1A2RU30 521 aaPredicted RBP14.35□□□□□ -0.11
CSNK1E-213ENST00000495232 TRPA1O75762 1119 aa14.35□□□□□ -0.11
CSNK1E-213ENST00000495232 CTDSPL2Q05D32 466 aa14.35□□□□□ -0.11
CSNK1E-213ENST00000495232 IMMTQ16891 758 aaKnown RBP14.35□□□□□ -0.11
CSNK1E-213ENST00000495232 GADL1Q6ZQY3 521 aa14.35□□□□□ -0.11
CSNK1E-213ENST00000495232 FEZ1Q99689 392 aa14.35□□□□□ -0.11
CSNK1E-213ENST00000495232 WDR18Q9BV38 432 aa14.35□□□□□ -0.11
CSNK1E-213ENST00000495232 TOMM22Q9NS69 142 aa14.35□□□□□ -0.11
CSNK1E-213ENST00000495232 RNF186Q9NXI6 227 aa14.35□□□□□ -0.11
CSNK1E-213ENST00000495232 SAGE1Q9NXZ1 904 aa14.35□□□□□ -0.11
CSNK1E-213ENST00000495232 ANAPC4Q9UJX5 808 aa14.35□□□□□ -0.11
CSNK1E-213ENST00000495232 PHIPQ8WWQ0 1821 aa14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 A0A0G2JLL6 359 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 USP17L10C9JJH3 530 aa14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 PRDM1O75626 825 aa14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 TSPY3P0CV98 308 aa14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 TSPY8P0CW00 308 aa14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 AKR1B1P15121 316 aa14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 BACE1P56817 501 aa14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 HAND2P61296 217 aa14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 JAG1P78504 1218 aa14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 SEPT2Q15019 361 aa14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 SHROOM1Q2M3G4 852 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 PRRT2Q7Z6L0 340 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 BRI3BPQ8WY22 251 aa14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 ESYT1Q9BSJ8 1104 aa14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 RNF41Q9H4P4 317 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 ARHGEF10LQ9HCE6 1279 aa14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 TMOD4Q9NZQ9 345 aa14.34□□□□□ -0.11
CSNK1E-213ENST00000495232 C19orf81C9J6K1 198 aa14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 IGF2BP3O00425 579 aaKnown RBP eCLIP14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 PCP11498 1178 aaKnown RBP14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 RASA1P20936 1047 aa14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 CTCFP49711 727 aaPredicted RBP14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 USP14P54578 494 aa14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 HMGCS2P54868 508 aa14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 ATP2B2Q01814 1243 aa14.33□□□□□ -0.12
CSNK1E-213ENST00000495232 ICA1Q05084 483 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms