RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-222	ENST00000493792	GJA8	P48165	433 aa		12.53	□□□□□ -0.4
TRAPPC12-222	ENST00000493792	NUCB1	Q02818	461 aa		12.53	□□□□□ -0.4
TRAPPC12-222	ENST00000493792	UBE3C	Q15386	1083 aa		12.53	□□□□□ -0.4
TRAPPC12-222	ENST00000493792	DDRGK1	Q96HY6	314 aa		12.53	□□□□□ -0.4
TRAPPC12-222	ENST00000493792	RIOK1	Q9BRS2	568 aa	Known RBP	12.53	□□□□□ -0.4
TRAPPC12-222	ENST00000493792	ZCCHC17	Q9NP64	241 aa	Known RBP	12.53	□□□□□ -0.4
TRAPPC12-222	ENST00000493792	ZNF112	Q9UJU3	913 aa		12.53	□□□□□ -0.4
TRAPPC12-222	ENST00000493792	COL2A1	P02458	1487 aa	Predicted RBP	12.53	□□□□□ -0.4
TRAPPC12-222	ENST00000493792	TRIM6-TRIM34	B2RNG4	842 aa		12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	IRF6	O14896	467 aa		12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	CENPB	P07199	599 aa	Predicted RBP	12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	GJB1	P08034	283 aa		12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	ZFY	P08048	801 aa	Predicted RBP	12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	PPAT	Q06203	517 aa		12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	PPIL2	Q13356	520 aa		12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	TTC6	Q86TZ1	520 aa		12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	SDR42E1	Q8WUS8	393 aa		12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	TRIM47	Q96LD4	638 aa		12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	MCM9	Q9NXL9	1143 aa		12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	STAP2	Q9UGK3	403 aa		12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	SRRD	Q9UH36	339 aa		12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	FOCAD	Q5VW36	1801 aa		12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	MYH1	P12882	1939 aa		12.52	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	PRKAB2	O43741	272 aa		12.51	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	CTNND1	O60716	968 aa	Known RBP	12.51	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	SNAPC2	Q13487	334 aa		12.51	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	KIF22	Q14807	665 aa		12.51	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.51	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	SCYL3	Q8IZE3	742 aa		12.51	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	NKX2-3	Q8TAU0	364 aa		12.51	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	APPBP2	Q92624	585 aa		12.51	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	RILPL2	Q969X0	211 aa		12.51	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	PUS7L	Q9H0K6	701 aa	Known RBP	12.51	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	HERC5	Q9UII4	1024 aa	Known RBP	12.51	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	SLC4A4	Q9Y6R1	1079 aa		12.51	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	SALL3	Q9BXA9	1300 aa		12.51	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	PHF20L1	A8MW92	1017 aa		12.5	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	TBC1D12	O60347	775 aa		12.5	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	OSBP	P22059	807 aa		12.5	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	GRK4	P32298	578 aa		12.5	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	PSMC4	P43686	418 aa		12.5	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	NOL9	Q5SY16	702 aa	Known RBP	12.5	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	PLEKHM2	Q8IWE5	1019 aa		12.5	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	AMOTL1	Q8IY63	956 aa		12.5	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	OSBP2	Q969R2	916 aa		12.5	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	EVI5L	Q96CN4	794 aa		12.5	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	LRCH3	Q96II8	777 aa		12.5	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	12.5	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	ZHX2	Q9Y6X8	837 aa		12.5	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	NAV1	Q8NEY1	1877 aa		12.5	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	ADGRA2	Q96PE1	1338 aa		12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792		A0A1W2PPC1	479 aa		12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	ECM2	O94769	699 aa	Predicted RBP	12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	APP	P05067	770 aa		12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	CCL5	P13501	91 aa		12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	CAP2	P40123	477 aa		12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	MAP3K10	Q02779	954 aa		12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	MOGS	Q13724	837 aa		12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	CCDC84	Q86UT8	332 aa	Predicted RBP	12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	HTATIP2	Q9BUP3	242 aa		12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	DCP1A	Q9NPI6	582 aa	Predicted RBP	12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	CPA4	Q9UI42	421 aa		12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	KCNH4	Q9UQ05	1017 aa		12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	NR2E3	Q9Y5X4	410 aa		12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	CUL9	Q8IWT3	2517 aa		12.49	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	DOCK1	Q14185	1865 aa		12.48	□□□□□ -0.41
TRAPPC12-222	ENST00000493792		M0R2C6	588 aa		12.48	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	GPAA1	O43292	621 aa		12.48	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	GDF11	O95390	407 aa		12.48	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	CYP2D6	P10635	497 aa		12.48	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	PTPRA	P18433	802 aa		12.48	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	PLCD1	P51178	756 aa		12.48	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	STRBP	Q96SI9	672 aa	Known RBP	12.48	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	RNF208	Q9H0X6	261 aa		12.48	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	ATP8A2	Q9NTI2	1148 aa		12.48	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	SERPINB13	Q9UIV8	391 aa		12.48	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	SIPA1L1	O43166	1804 aa		12.48	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	TRIM75P	A6NK02	468 aa		12.47	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	USP17L12	C9JPN9	530 aa		12.47	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	USP17L21	D6R901	530 aa		12.47	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	SGPL1	O95470	568 aa		12.47	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	HOXD10	P28358	340 aa		12.47	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	TDO2	P48775	406 aa		12.47	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	MNX1	P50219	401 aa	Predicted RBP	12.47	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	RRP1B	Q14684	758 aa	Known RBP	12.47	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	GADL1	Q6ZQY3	521 aa		12.47	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	ANKRD23	Q86SG2	305 aa		12.47	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	U2AF1L4	Q8WU68	220 aa	Known RBP	12.47	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	SEC62	Q99442	399 aa	Known RBP	12.47	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	DNAJC18	Q9H819	358 aa		12.47	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	CYP2D7	A0A087X1C5	515 aa		12.46	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	USP17L5	A8MUK1	530 aa		12.46	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	MPHOSPH10	O00566	681 aa	Known RBP	12.46	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	CXCL11	O14625	94 aa		12.46	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	FMNL1	O95466	1100 aa	Predicted RBP	12.46	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	GNAT2	P19087	354 aa		12.46	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	EVX2	Q03828	476 aa		12.46	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	CERKL	Q49MI3	558 aa	Predicted RBP	12.46	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	ZMYM1	Q5SVZ6	1142 aa		12.46	□□□□□ -0.41
TRAPPC12-222	ENST00000493792	CCDC129	Q6ZRS4	1044 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 191.7 ms