RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 WTAPQ15007 396 aa16.52■□□□□ 0.24
PDZRN3-210ENST00000492909 NBPF9Q3BBW0 867 aa16.52■□□□□ 0.24
PDZRN3-210ENST00000492909 FAM47AQ5JRC9 791 aa16.52■□□□□ 0.24
PDZRN3-210ENST00000492909 NFXL1Q6ZNB6 911 aa16.52■□□□□ 0.24
PDZRN3-210ENST00000492909 GTF3C6Q969F1 213 aa16.52■□□□□ 0.24
PDZRN3-210ENST00000492909 ZSCAN10Q96SZ4 725 aaPredicted RBP16.52■□□□□ 0.24
PDZRN3-210ENST00000492909 VEZTQ9HBM0 779 aa16.52■□□□□ 0.24
PDZRN3-210ENST00000492909 SWAP70Q9UH65 585 aa16.52■□□□□ 0.24
PDZRN3-210ENST00000492909 BRPF3Q9ULD4 1205 aa16.52■□□□□ 0.24
PDZRN3-210ENST00000492909 TNKSO95271 1327 aa16.52■□□□□ 0.24
PDZRN3-210ENST00000492909 WDR90Q96KV7 1748 aa16.52■□□□□ 0.23
PDZRN3-210ENST00000492909 DDTLA6NHG4 134 aaPredicted RBP16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 TCP10L2B9ZVM9 353 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 H7C1D1 291 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 PFKFB2O60825 505 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 TSPY3P0CV98 308 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 TSPY8P0CW00 308 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 RASA1P20936 1047 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 DDIT3P35638 169 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 TFAP4Q01664 338 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 RBM26Q5T8P6 1007 aaKnown RBP16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 GPRC5DQ9NZD1 345 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 PI4KBQ9UBF8 816 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 TAOK2Q9UL54 1235 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 CCDC69A6NI79 296 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 GOLGA8BA8MQT2 603 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 ST3GAL1Q11201 340 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 SEC23AQ15436 765 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 SAMD7Q7Z3H4 446 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 CHMP4CQ96CF2 233 aa16.51■□□□□ 0.23
PDZRN3-210ENST00000492909 EGFRP00533 1210 aa16.5■□□□□ 0.23
PDZRN3-210ENST00000492909 KIF4BQ2VIQ3 1234 aa16.5■□□□□ 0.23
PDZRN3-210ENST00000492909 TBC1D10BQ4KMP7 808 aaPredicted RBP16.5■□□□□ 0.23
PDZRN3-210ENST00000492909 APOA5Q6Q788 366 aa16.5■□□□□ 0.23
PDZRN3-210ENST00000492909 SH3BP5LQ7L8J4 393 aa16.5■□□□□ 0.23
PDZRN3-210ENST00000492909 FAM83AQ86UY5 434 aa16.5■□□□□ 0.23
PDZRN3-210ENST00000492909 CRACR2BQ8N4Y2 399 aaPredicted RBP16.5■□□□□ 0.23
PDZRN3-210ENST00000492909 ENAHQ8N8S7 591 aaPredicted RBP16.5■□□□□ 0.23
PDZRN3-210ENST00000492909 FAM151AQ8WW52 585 aa16.5■□□□□ 0.23
PDZRN3-210ENST00000492909 SENP2Q9HC62 589 aa16.5■□□□□ 0.23
PDZRN3-210ENST00000492909 CIZ1Q9ULV3 898 aaPredicted RBP16.5■□□□□ 0.23
PDZRN3-210ENST00000492909 VEGFAP15692 232 aaPredicted RBP16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 SCRN1Q12765 414 aa16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 CCDC178Q5BJE1 867 aa16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 SYNE3Q6ZMZ3 975 aa16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 FOXP4Q8IVH2 680 aaPredicted RBP16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 HACL1Q9UJ83 578 aa16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 SMC3Q9UQE7 1217 aa16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 SLC12A7Q9Y666 1083 aa16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 CNTNAP1P78357 1384 aa16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 LMOD1P29536 600 aaPredicted RBP16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 TNFAIP1Q13829 316 aa16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 IFIT1BQ5T764 474 aaKnown RBP16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 CSRNP1Q96S65 589 aa16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 TRIM34Q9BYJ4 488 aa16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 TCP11L1Q9NUJ3 509 aa16.49■□□□□ 0.23
PDZRN3-210ENST00000492909 KIF3CO14782 793 aa16.48■□□□□ 0.23
PDZRN3-210ENST00000492909 ZBTB43O43298 467 aa16.48■□□□□ 0.23
PDZRN3-210ENST00000492909 NMT2O60551 498 aa16.48■□□□□ 0.23
PDZRN3-210ENST00000492909 POTEIP0CG38 1075 aa16.48■□□□□ 0.23
PDZRN3-210ENST00000492909 POTEJP0CG39 1038 aa16.48■□□□□ 0.23
PDZRN3-210ENST00000492909 MCM4P33991 863 aa16.48■□□□□ 0.23
PDZRN3-210ENST00000492909 EPHX2P34913 555 aa16.48■□□□□ 0.23
PDZRN3-210ENST00000492909 TNNI2P48788 182 aa16.48■□□□□ 0.23
PDZRN3-210ENST00000492909 CCT2P78371 535 aaKnown RBP16.48■□□□□ 0.23
PDZRN3-210ENST00000492909 NEDD1Q8NHV4 660 aa16.48■□□□□ 0.23
PDZRN3-210ENST00000492909 TAF1DQ9H5J8 278 aaPredicted RBP16.48■□□□□ 0.23
PDZRN3-210ENST00000492909 HPS5Q9UPZ3 1129 aa16.48■□□□□ 0.23
PDZRN3-210ENST00000492909 DHX16O60231 1041 aaKnown RBP16.47■□□□□ 0.23
PDZRN3-210ENST00000492909 SHMT1P34896 483 aa16.47■□□□□ 0.23
PDZRN3-210ENST00000492909 MICU3Q86XE3 530 aa16.47■□□□□ 0.23
PDZRN3-210ENST00000492909 DGKHQ86XP1 1220 aa16.47■□□□□ 0.23
PDZRN3-210ENST00000492909 TRPM4Q8TD43 1214 aa16.47■□□□□ 0.23
PDZRN3-210ENST00000492909 LLPHQ9BRT6 129 aaKnown RBP16.47■□□□□ 0.23
PDZRN3-210ENST00000492909 NCOA5Q9HCD5 579 aaKnown RBP16.47■□□□□ 0.23
PDZRN3-210ENST00000492909 IL17RBQ9NRM6 502 aa16.47■□□□□ 0.23
PDZRN3-210ENST00000492909 SCN4AP35499 1836 aa16.47■□□□□ 0.23
PDZRN3-210ENST00000492909 IQCA1LA6NCM1 817 aa16.46■□□□□ 0.23
PDZRN3-210ENST00000492909 METAP2P50579 478 aaKnown RBP eCLIP16.46■□□□□ 0.23
PDZRN3-210ENST00000492909 RCAN1P53805 252 aa16.46■□□□□ 0.23
PDZRN3-210ENST00000492909 EAPPQ56P03 285 aaPredicted RBP16.46■□□□□ 0.23
PDZRN3-210ENST00000492909 METTL16Q86W50 562 aaKnown RBP16.46■□□□□ 0.23
PDZRN3-210ENST00000492909 RAB11FIP4Q86YS3 637 aa16.46■□□□□ 0.23
PDZRN3-210ENST00000492909 ZNF654Q8IZM8 581 aa16.46■□□□□ 0.23
PDZRN3-210ENST00000492909 DNAJC18Q9H819 358 aa16.46■□□□□ 0.23
PDZRN3-210ENST00000492909 HERC5Q9UII4 1024 aaKnown RBP16.46■□□□□ 0.23
PDZRN3-210ENST00000492909 PLIN4Q96Q06 1357 aa16.46■□□□□ 0.23
PDZRN3-210ENST00000492909 GJB2P29033 226 aa16.46■□□□□ 0.22
PDZRN3-210ENST00000492909 RCSD1Q6JBY9 416 aa16.46■□□□□ 0.22
PDZRN3-210ENST00000492909 CCDC17Q96LX7 622 aa16.46■□□□□ 0.22
PDZRN3-210ENST00000492909 TMEM39BQ9GZU3 492 aa16.46■□□□□ 0.22
PDZRN3-210ENST00000492909 GREB1LQ9C091 1923 aaPredicted RBP16.45■□□□□ 0.22
PDZRN3-210ENST00000492909 GOLGA8AA7E2F4 631 aa16.45■□□□□ 0.22
PDZRN3-210ENST00000492909 CPLX1O14810 134 aa16.45■□□□□ 0.22
PDZRN3-210ENST00000492909 RXRAP19793 462 aa16.45■□□□□ 0.22
PDZRN3-210ENST00000492909 HIRAP54198 1017 aaPredicted RBP16.45■□□□□ 0.22
PDZRN3-210ENST00000492909 CATIPQ7Z7H3 387 aa16.45■□□□□ 0.22
PDZRN3-210ENST00000492909 ANKS1AQ92625 1134 aa16.45■□□□□ 0.22
PDZRN3-210ENST00000492909 MYL10Q9BUA6 226 aa16.45■□□□□ 0.22
PDZRN3-210ENST00000492909 NID2Q14112 1375 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms