RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SLC6A19Q695T7 634 aa6.17□□□□□ -1.42
CD46-216ENST00000490278 BEND4Q6ZU67 534 aa6.17□□□□□ -1.42
CD46-216ENST00000490278 UBE3DQ7Z6J8 389 aa6.17□□□□□ -1.42
CD46-216ENST00000490278 CLEC10AQ8IUN9 316 aa6.17□□□□□ -1.42
CD46-216ENST00000490278 MCATQ8IVS2 390 aaKnown RBP6.17□□□□□ -1.42
CD46-216ENST00000490278 MRPL41Q8IXM3 137 aaKnown RBP6.17□□□□□ -1.42
CD46-216ENST00000490278 RBBP8NLQ8NC74 664 aaPredicted RBP6.17□□□□□ -1.42
CD46-216ENST00000490278 TP53INP1Q96A56 240 aa6.17□□□□□ -1.42
CD46-216ENST00000490278 SHDQ96IW2 340 aa6.17□□□□□ -1.42
CD46-216ENST00000490278 TMEM87BQ96K49 555 aa6.17□□□□□ -1.42
CD46-216ENST00000490278 GMIPQ9P107 970 aa6.17□□□□□ -1.42
CD46-216ENST00000490278 PPP1R1BQ9UD71 204 aaPredicted RBP6.17□□□□□ -1.42
CD46-216ENST00000490278 KLHL3Q9UH77 587 aa6.17□□□□□ -1.42
CD46-216ENST00000490278 SLC22A31A6NKX4 558 aa6.16□□□□□ -1.42
CD46-216ENST00000490278 MEIS3P2A8K0S8 358 aa6.16□□□□□ -1.42
CD46-216ENST00000490278 GIPRP48546 466 aa6.16□□□□□ -1.42
CD46-216ENST00000490278 YARSP54577 528 aaKnown RBP6.16□□□□□ -1.42
CD46-216ENST00000490278 SLBPQ14493 270 aaKnown RBP eCLIP6.16□□□□□ -1.42
CD46-216ENST00000490278 NKG7Q16617 165 aa6.16□□□□□ -1.42
CD46-216ENST00000490278 FAM13CQ8NE31 585 aa6.16□□□□□ -1.42
CD46-216ENST00000490278 OR6P1Q8NGX9 317 aa6.16□□□□□ -1.42
CD46-216ENST00000490278 TMEM40Q8WWA1 233 aa6.16□□□□□ -1.42
CD46-216ENST00000490278 ARMC5Q96C12 935 aa6.16□□□□□ -1.42
CD46-216ENST00000490278 ANTXR1Q9H6X2 564 aa6.16□□□□□ -1.42
CD46-216ENST00000490278 LGR6Q9HBX8 967 aa6.16□□□□□ -1.42
CD46-216ENST00000490278 MRVI1Q9Y6F6 885 aa6.16□□□□□ -1.42
CD46-216ENST00000490278 CHURC1-FNTBB4DL54 471 aa6.15□□□□□ -1.42
CD46-216ENST00000490278 DNAJA2O60884 412 aa6.15□□□□□ -1.42
CD46-216ENST00000490278 LRIG2O94898 1065 aa6.15□□□□□ -1.42
CD46-216ENST00000490278 GTF2F1P35269 517 aaKnown RBP eCLIP6.15□□□□□ -1.42
CD46-216ENST00000490278 NFKBIBQ15653 356 aa6.15□□□□□ -1.42
CD46-216ENST00000490278 PRAMEF13Q5VWM6 474 aa6.15□□□□□ -1.42
CD46-216ENST00000490278 OVOS1Q6IE37 1185 aa6.15□□□□□ -1.42
CD46-216ENST00000490278 PAOXQ6QHF9 649 aa6.15□□□□□ -1.42
CD46-216ENST00000490278 LSRQ86X29 649 aaPredicted RBP6.15□□□□□ -1.42
CD46-216ENST00000490278 ANAPC16Q96DE5 110 aa6.15□□□□□ -1.42
CD46-216ENST00000490278 FAM83CQ9BQN1 747 aa6.15□□□□□ -1.42
CD46-216ENST00000490278 FOXQ1Q9C009 403 aa6.15□□□□□ -1.42
CD46-216ENST00000490278 TPSG1Q9NRR2 321 aa6.15□□□□□ -1.42
CD46-216ENST00000490278 USP35Q9P2H5 1018 aa6.15□□□□□ -1.42
CD46-216ENST00000490278 RAXQ9Y2V3 346 aa6.15□□□□□ -1.42
CD46-216ENST00000490278 UPK3BL1B0FP48 263 aa6.14□□□□□ -1.43
CD46-216ENST00000490278 UPK3BL2E5RIL1 263 aa6.14□□□□□ -1.43
CD46-216ENST00000490278 DYNC1LI2O43237 492 aaPredicted RBP6.14□□□□□ -1.43
CD46-216ENST00000490278 STK10O94804 968 aaKnown RBP6.14□□□□□ -1.43
CD46-216ENST00000490278 CST3P01034 146 aaPredicted RBP6.14□□□□□ -1.43
CD46-216ENST00000490278 CDCP2Q5VXM1 449 aa6.14□□□□□ -1.43
CD46-216ENST00000490278 SEZ6L2Q6UXD5 910 aa6.14□□□□□ -1.43
CD46-216ENST00000490278 PRR23CQ6ZRP0 262 aa6.14□□□□□ -1.43
CD46-216ENST00000490278 ARMCX6Q7L4S7 300 aa6.14□□□□□ -1.43
CD46-216ENST00000490278 NLRC3Q7RTR2 1065 aa6.14□□□□□ -1.43
CD46-216ENST00000490278 SLFN12Q8IYM2 578 aa6.14□□□□□ -1.43
CD46-216ENST00000490278 MFSD2AQ8NA29 543 aa6.14□□□□□ -1.43
CD46-216ENST00000490278 UBXN4Q92575 508 aa6.14□□□□□ -1.43
CD46-216ENST00000490278 DHX38Q92620 1227 aaKnown RBP6.14□□□□□ -1.43
CD46-216ENST00000490278 ATG4CQ96DT6 458 aa6.14□□□□□ -1.43
CD46-216ENST00000490278 CNNM2Q9H8M5 875 aa6.14□□□□□ -1.43
CD46-216ENST00000490278 ZNF408Q9H9D4 720 aa6.14□□□□□ -1.43
CD46-216ENST00000490278 STOML1Q9UBI4 398 aa6.14□□□□□ -1.43
CD46-216ENST00000490278 NME1P15531 152 aaKnown RBP6.13□□□□□ -1.43
CD46-216ENST00000490278 RAG1P15918 1043 aa6.13□□□□□ -1.43
CD46-216ENST00000490278 ETFBP38117 255 aa6.13□□□□□ -1.43
CD46-216ENST00000490278 ARSHQ5FYA8 562 aa6.13□□□□□ -1.43
CD46-216ENST00000490278 TM9SF2Q99805 663 aa6.13□□□□□ -1.43
CD46-216ENST00000490278 DPH2Q9BQC3 489 aaPredicted RBP6.13□□□□□ -1.43
CD46-216ENST00000490278 C1GALT1Q9NS00 363 aa6.13□□□□□ -1.43
CD46-216ENST00000490278 HMX2A2RU54 273 aa6.12□□□□□ -1.43
CD46-216ENST00000490278 GUCY2CP25092 1073 aa6.12□□□□□ -1.43
CD46-216ENST00000490278 CDK5R2Q13319 367 aa6.12□□□□□ -1.43
CD46-216ENST00000490278 DOC2BQ14184 412 aa6.12□□□□□ -1.43
CD46-216ENST00000490278 TNNI3KQ59H18 835 aa6.12□□□□□ -1.43
CD46-216ENST00000490278 INTS3Q68E01 1043 aaKnown RBP6.12□□□□□ -1.43
CD46-216ENST00000490278 PHACTR4Q8IZ21 702 aa6.12□□□□□ -1.43
CD46-216ENST00000490278 TAB3Q8N5C8 712 aaPredicted RBP6.12□□□□□ -1.43
CD46-216ENST00000490278 FAM169BQ8N8A8 192 aa6.12□□□□□ -1.43
CD46-216ENST00000490278 GIMAP7Q8NHV1 300 aa6.12□□□□□ -1.43
CD46-216ENST00000490278 XAGE3Q8WTP9 111 aa6.12□□□□□ -1.43
CD46-216ENST00000490278 HIRIP3Q9BW71 556 aaPredicted RBP6.12□□□□□ -1.43
CD46-216ENST00000490278 C7orf69Q9H7B7 122 aa6.12□□□□□ -1.43
CD46-216ENST00000490278 PRKAG3Q9UGI9 489 aa6.12□□□□□ -1.43
CD46-216ENST00000490278 TNFRSF10CO14798 259 aa6.11□□□□□ -1.43
CD46-216ENST00000490278 SMAD7O15105 426 aaKnown RBP6.11□□□□□ -1.43
CD46-216ENST00000490278 RBL2Q08999 1139 aa6.11□□□□□ -1.43
CD46-216ENST00000490278 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
CD46-216ENST00000490278 RUFY4Q6ZNE9 571 aa6.11□□□□□ -1.43
CD46-216ENST00000490278 C19orf47Q8N9M1 422 aaKnown RBP6.11□□□□□ -1.43
CD46-216ENST00000490278 CYB5D2Q8WUJ1 264 aa6.11□□□□□ -1.43
CD46-216ENST00000490278 CCDC74BQ96LY2 380 aa6.11□□□□□ -1.43
CD46-216ENST00000490278 MIPEPQ99797 713 aa6.11□□□□□ -1.43
CD46-216ENST00000490278 KRTAP4-12Q9BQ66 201 aa6.11□□□□□ -1.43
CD46-216ENST00000490278 PRDM10Q9NQV6 1147 aa6.11□□□□□ -1.43
CD46-216ENST00000490278 RGS13O14921 159 aa6.1□□□□□ -1.43
CD46-216ENST00000490278 H2AFB1P0C5Y9 115 aa6.1□□□□□ -1.43
CD46-216ENST00000490278 H2AFB2P0C5Z0 115 aa6.1□□□□□ -1.43
CD46-216ENST00000490278 CCNFP41002 786 aa6.1□□□□□ -1.43
CD46-216ENST00000490278 PPP2R5EQ16537 467 aa6.1□□□□□ -1.43
CD46-216ENST00000490278 ANKS3Q6ZW76 656 aa6.1□□□□□ -1.43
CD46-216ENST00000490278 CKAP2LQ8IYA6 745 aa6.1□□□□□ -1.43
CD46-216ENST00000490278 TBC1D32Q96NH3 1257 aa6.1□□□□□ -1.43
CD46-216ENST00000490278 DNAJC2Q99543 621 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms