RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 FLT3LGP49771 235 aa11.6□□□□□ -0.55
CCT3-213ENST00000489870 USP14P54578 494 aa11.6□□□□□ -0.55
CCT3-213ENST00000489870 ANKLE1Q8NAG6 615 aa11.6□□□□□ -0.55
CCT3-213ENST00000489870 SH3TC2Q8TF17 1288 aa11.6□□□□□ -0.55
CCT3-213ENST00000489870 SNRKQ9NRH2 765 aa11.6□□□□□ -0.55
CCT3-213ENST00000489870 ZBTB40Q9NUA8 1239 aa11.6□□□□□ -0.55
CCT3-213ENST00000489870 SERPINB13Q9UIV8 391 aa11.6□□□□□ -0.55
CCT3-213ENST00000489870 FLT1P17948 1338 aa11.6□□□□□ -0.55
CCT3-213ENST00000489870 SPDYE4A6NLX3 237 aa11.59□□□□□ -0.55
CCT3-213ENST00000489870 IDH1O75874 414 aaKnown RBP11.59□□□□□ -0.55
CCT3-213ENST00000489870 CCL5P13501 91 aa11.59□□□□□ -0.55
CCT3-213ENST00000489870 PRKCZQ05513 592 aa11.59□□□□□ -0.55
CCT3-213ENST00000489870 UBE2Q1Q7Z7E8 422 aa11.59□□□□□ -0.55
CCT3-213ENST00000489870 RHPN1Q8TCX5 695 aa11.59□□□□□ -0.55
CCT3-213ENST00000489870 C12orf42Q96LP6 360 aa11.59□□□□□ -0.55
CCT3-213ENST00000489870 CCDC8Q9H0W5 538 aaPredicted RBP11.59□□□□□ -0.55
CCT3-213ENST00000489870 RNF208Q9H0X6 261 aa11.59□□□□□ -0.55
CCT3-213ENST00000489870 ASCC2Q9H1I8 757 aaPredicted RBP11.59□□□□□ -0.55
CCT3-213ENST00000489870 BIN2Q9UBW5 565 aaPredicted RBP11.59□□□□□ -0.55
CCT3-213ENST00000489870 NR2E3Q9Y5X4 410 aa11.59□□□□□ -0.55
CCT3-213ENST00000489870 MAST2Q6P0Q8 1798 aa11.59□□□□□ -0.55
CCT3-213ENST00000489870 BRCA2P51587 3418 aa11.58□□□□□ -0.55
CCT3-213ENST00000489870 MAPK4P31152 587 aa11.58□□□□□ -0.56
CCT3-213ENST00000489870 HMGCS2P54868 508 aa11.58□□□□□ -0.56
CCT3-213ENST00000489870 IRX3P78415 501 aaPredicted RBP11.58□□□□□ -0.56
CCT3-213ENST00000489870 USP17L2Q6R6M4 530 aa11.58□□□□□ -0.56
CCT3-213ENST00000489870 LBX2Q6XYB7 198 aa11.58□□□□□ -0.56
CCT3-213ENST00000489870 AACSQ86V21 672 aa11.58□□□□□ -0.56
CCT3-213ENST00000489870 GPRC5AQ8NFJ5 357 aa11.58□□□□□ -0.56
CCT3-213ENST00000489870 CABP5Q9NP86 173 aa11.58□□□□□ -0.56
CCT3-213ENST00000489870 PIH1D3Q9NQM4 214 aaKnown RBP11.58□□□□□ -0.56
CCT3-213ENST00000489870 PAK6Q9NQU5 681 aaPredicted RBP11.58□□□□□ -0.56
CCT3-213ENST00000489870 GJD2Q9UKL4 321 aa11.58□□□□□ -0.56
CCT3-213ENST00000489870 PALD1Q9ULE6 856 aa11.58□□□□□ -0.56
CCT3-213ENST00000489870 LOC285556D6RIA3 1793 aa11.58□□□□□ -0.56
CCT3-213ENST00000489870 ATAD5Q96QE3 1844 aa11.58□□□□□ -0.56
CCT3-213ENST00000489870 CDK5RAP2Q96SN8 1893 aa11.57□□□□□ -0.56
CCT3-213ENST00000489870 MYH1P12882 1939 aa11.57□□□□□ -0.56
CCT3-213ENST00000489870 GLRX3O76003 335 aaKnown RBP11.57□□□□□ -0.56
CCT3-213ENST00000489870 USP5P45974 858 aa11.57□□□□□ -0.56
CCT3-213ENST00000489870 HABP4Q5JVS0 413 aaKnown RBP11.57□□□□□ -0.56
CCT3-213ENST00000489870 TREML2Q5T2D2 321 aa11.57□□□□□ -0.56
CCT3-213ENST00000489870 ADGRA1Q86SQ6 560 aa11.57□□□□□ -0.56
CCT3-213ENST00000489870 MAPKAPK5Q8IW41 473 aa11.57□□□□□ -0.56
CCT3-213ENST00000489870 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
CCT3-213ENST00000489870 ANKRD13CQ8N6S4 541 aa11.57□□□□□ -0.56
CCT3-213ENST00000489870 MAGEB6Q8N7X4 407 aa11.57□□□□□ -0.56
CCT3-213ENST00000489870 U2AF1L4Q8WU68 220 aaKnown RBP11.57□□□□□ -0.56
CCT3-213ENST00000489870 SOCS4Q8WXH5 440 aa11.57□□□□□ -0.56
CCT3-213ENST00000489870 CRNKL1Q9BZJ0 848 aaKnown RBP11.57□□□□□ -0.56
CCT3-213ENST00000489870 KIAA1683Q9H0B3 1180 aa11.57□□□□□ -0.56
CCT3-213ENST00000489870 CRISPLD2Q9H0B8 497 aa11.57□□□□□ -0.56
CCT3-213ENST00000489870 ZBTB21Q9ULJ3 1066 aa11.57□□□□□ -0.56
CCT3-213ENST00000489870 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
CCT3-213ENST00000489870 USP17L15C9J2P7 530 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 USP17L13C9JLJ4 530 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 USP17L11C9JVI0 530 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 USP17L18D6R9N7 530 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 USP17L22D6RA61 530 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 USP17L17D6RBQ6 530 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 USP17L19D6RCP7 530 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 USP17L20D6RJB6 530 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 HMGCRP04035 888 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 IFIT2P09913 472 aaKnown RBP11.56□□□□□ -0.56
CCT3-213ENST00000489870 ATP5JP18859 108 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 HERVK_113P62684 666 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 CCNA1P78396 465 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 USP17L24Q0WX57 530 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 RRP1BQ14684 758 aaKnown RBP11.56□□□□□ -0.56
CCT3-213ENST00000489870 MTFR1Q15390 333 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 CERKLQ49MI3 558 aaPredicted RBP11.56□□□□□ -0.56
CCT3-213ENST00000489870 SLC9C2Q5TAH2 1124 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 SP7Q8TDD2 431 aaPredicted RBP11.56□□□□□ -0.56
CCT3-213ENST00000489870 PANK1Q8TE04 598 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 NUDT12Q9BQG2 462 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 RIOK1Q9BRS2 568 aaKnown RBP11.56□□□□□ -0.56
CCT3-213ENST00000489870 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.56□□□□□ -0.56
CCT3-213ENST00000489870 ATP8A2Q9NTI2 1148 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 HOXC10Q9NYD6 342 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 SWAP70Q9UH65 585 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 GABRQQ9UN88 632 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 MYO5AQ9Y4I1 1855 aaKnown RBP11.56□□□□□ -0.56
CCT3-213ENST00000489870 RPTORQ8N122 1335 aa11.56□□□□□ -0.56
CCT3-213ENST00000489870 MAGEB6P1A0A0J9YX57 407 aa11.55□□□□□ -0.56
CCT3-213ENST00000489870 A0A1W2PPC1 479 aa11.55□□□□□ -0.56
CCT3-213ENST00000489870 MTMR2Q13614 643 aa11.55□□□□□ -0.56
CCT3-213ENST00000489870 ZSCAN25Q6NSZ9 544 aa11.55□□□□□ -0.56
CCT3-213ENST00000489870 CCDC17Q96LX7 622 aa11.55□□□□□ -0.56
CCT3-213ENST00000489870 P2RX7Q99572 595 aaKnown RBP11.55□□□□□ -0.56
CCT3-213ENST00000489870 C1orf115Q9H7X2 142 aa11.55□□□□□ -0.56
CCT3-213ENST00000489870 DNAJC18Q9H819 358 aa11.55□□□□□ -0.56
CCT3-213ENST00000489870 HMX1Q9NP08 348 aaPredicted RBP11.55□□□□□ -0.56
CCT3-213ENST00000489870 RCAN3Q9UKA8 241 aa11.55□□□□□ -0.56
CCT3-213ENST00000489870 EXOC6BQ9Y2D4 811 aa11.55□□□□□ -0.56
CCT3-213ENST00000489870 TRIOBPQ9H2D6 2365 aa11.54□□□□□ -0.56
CCT3-213ENST00000489870 FAM196BA6NMK8 535 aa11.54□□□□□ -0.56
CCT3-213ENST00000489870 STRNO43815 780 aa11.54□□□□□ -0.56
CCT3-213ENST00000489870 TFRCP02786 760 aaKnown RBP11.54□□□□□ -0.56
CCT3-213ENST00000489870 INHAP05111 366 aa11.54□□□□□ -0.56
CCT3-213ENST00000489870 GABPAQ06546 454 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms