RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 PPM1GO15355 546 aaPredicted RBP6.87□□□□□ -1.31
SRRM1-215ENST00000488317 ACRP10323 421 aa6.87□□□□□ -1.31
SRRM1-215ENST00000488317 HCLS1P14317 486 aaPredicted RBP6.87□□□□□ -1.31
SRRM1-215ENST00000488317 HOXB4P17483 251 aaPredicted RBP6.87□□□□□ -1.31
SRRM1-215ENST00000488317 HSD3B2P26439 372 aa6.87□□□□□ -1.31
SRRM1-215ENST00000488317 RING1Q06587 406 aa6.87□□□□□ -1.31
SRRM1-215ENST00000488317 FDX2Q6P4F2 183 aa6.87□□□□□ -1.31
SRRM1-215ENST00000488317 IGF2-ASQ6U949 168 aa6.87□□□□□ -1.31
SRRM1-215ENST00000488317 KIAA1211Q6ZU35 1233 aa6.87□□□□□ -1.31
SRRM1-215ENST00000488317 MCATQ8IVS2 390 aaKnown RBP6.87□□□□□ -1.31
SRRM1-215ENST00000488317 RNF214Q8ND24 703 aa6.87□□□□□ -1.31
SRRM1-215ENST00000488317 SH3TC2Q8TF17 1288 aa6.87□□□□□ -1.31
SRRM1-215ENST00000488317 MRPL18Q9H0U6 180 aaKnown RBP6.87□□□□□ -1.31
SRRM1-215ENST00000488317 PHAXQ9H814 394 aaKnown RBP6.87□□□□□ -1.31
SRRM1-215ENST00000488317 DISC1Q9NRI5 854 aa6.87□□□□□ -1.31
SRRM1-215ENST00000488317 TJP2Q9UDY2 1190 aa6.87□□□□□ -1.31
SRRM1-215ENST00000488317 PFDN2Q9UHV9 154 aa6.87□□□□□ -1.31
SRRM1-215ENST00000488317 TNFRSF10CO14798 259 aa6.86□□□□□ -1.31
SRRM1-215ENST00000488317 ADH5P11766 374 aa6.86□□□□□ -1.31
SRRM1-215ENST00000488317 DRD2P14416 443 aa6.86□□□□□ -1.31
SRRM1-215ENST00000488317 ASPAP45381 313 aa6.86□□□□□ -1.31
SRRM1-215ENST00000488317 SNRPNP63162 240 aaKnown RBP6.86□□□□□ -1.31
SRRM1-215ENST00000488317 SOX4Q06945 474 aaPredicted RBP6.86□□□□□ -1.31
SRRM1-215ENST00000488317 TTLL4Q14679 1199 aa6.86□□□□□ -1.31
SRRM1-215ENST00000488317 NCAPHQ15003 741 aa6.86□□□□□ -1.31
SRRM1-215ENST00000488317 GNPTABQ3T906 1256 aa6.86□□□□□ -1.31
SRRM1-215ENST00000488317 PRRT3Q5FWE3 981 aa6.86□□□□□ -1.31
SRRM1-215ENST00000488317 SLC6A19Q695T7 634 aa6.86□□□□□ -1.31
SRRM1-215ENST00000488317 LILRB2Q8N423 598 aa6.86□□□□□ -1.31
SRRM1-215ENST00000488317 KCT2Q8NC54 265 aa6.86□□□□□ -1.31
SRRM1-215ENST00000488317 SMG8Q8ND04 991 aaKnown RBP6.86□□□□□ -1.31
SRRM1-215ENST00000488317 TMEM87BQ96K49 555 aa6.86□□□□□ -1.31
SRRM1-215ENST00000488317 MKL2Q9ULH7 1088 aa6.86□□□□□ -1.31
SRRM1-215ENST00000488317 PCDHB10Q9UN67 800 aa6.86□□□□□ -1.31
SRRM1-215ENST00000488317 LTBP3Q9NS15 1303 aa6.85□□□□□ -1.31
SRRM1-215ENST00000488317 GNB5O14775 395 aa6.85□□□□□ -1.31
SRRM1-215ENST00000488317 POLR2BP30876 1174 aaKnown RBP6.85□□□□□ -1.31
SRRM1-215ENST00000488317 GBP1P32455 592 aa6.85□□□□□ -1.31
SRRM1-215ENST00000488317 SLC7A5Q01650 507 aa6.85□□□□□ -1.31
SRRM1-215ENST00000488317 KIAA1211LQ6NV74 962 aa6.85□□□□□ -1.31
SRRM1-215ENST00000488317 LINC00114Q6XXX2 140 aa6.85□□□□□ -1.31
SRRM1-215ENST00000488317 EEPD1Q7L9B9 569 aa6.85□□□□□ -1.31
SRRM1-215ENST00000488317 DHRS1Q96LJ7 313 aa6.85□□□□□ -1.31
SRRM1-215ENST00000488317 KIF2CQ99661 725 aa6.85□□□□□ -1.31
SRRM1-215ENST00000488317 SUGCTQ9HAC7 445 aa6.85□□□□□ -1.31
SRRM1-215ENST00000488317 KDM2BQ8NHM5 1336 aa6.84□□□□□ -1.31
SRRM1-215ENST00000488317 ELNP15502 786 aa6.84□□□□□ -1.31
SRRM1-215ENST00000488317 SSRP1Q08945 709 aaKnown RBP6.84□□□□□ -1.31
SRRM1-215ENST00000488317 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
SRRM1-215ENST00000488317 MRPL41Q8IXM3 137 aaKnown RBP6.84□□□□□ -1.31
SRRM1-215ENST00000488317 SLFN12Q8IYM2 578 aa6.84□□□□□ -1.31
SRRM1-215ENST00000488317 AGGF1Q8N302 714 aaeCLIP6.84□□□□□ -1.31
SRRM1-215ENST00000488317 APPBP2Q92624 585 aa6.84□□□□□ -1.31
SRRM1-215ENST00000488317 CCDC74BQ96LY2 380 aa6.84□□□□□ -1.31
SRRM1-215ENST00000488317 DPH2Q9BQC3 489 aaPredicted RBP6.84□□□□□ -1.31
SRRM1-215ENST00000488317 FBRSQ9HAH7 460 aa6.84□□□□□ -1.31
SRRM1-215ENST00000488317 CWC22Q9HCG8 908 aaKnown RBP6.84□□□□□ -1.31
SRRM1-215ENST00000488317 FANCLQ9NW38 375 aa6.84□□□□□ -1.31
SRRM1-215ENST00000488317 ESYT3A0FGR9 886 aa6.83□□□□□ -1.32
SRRM1-215ENST00000488317 ENPP3O14638 875 aa6.83□□□□□ -1.32
SRRM1-215ENST00000488317 SART1O43290 800 aaKnown RBP6.83□□□□□ -1.32
SRRM1-215ENST00000488317 CDC45O75419 566 aa6.83□□□□□ -1.32
SRRM1-215ENST00000488317 NEFMP07197 916 aa6.83□□□□□ -1.32
SRRM1-215ENST00000488317 NKG7Q16617 165 aa6.83□□□□□ -1.32
SRRM1-215ENST00000488317 ANKRD34AQ69YU3 496 aa6.83□□□□□ -1.32
SRRM1-215ENST00000488317 SPATC1Q76KD6 591 aa6.83□□□□□ -1.32
SRRM1-215ENST00000488317 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.83□□□□□ -1.32
SRRM1-215ENST00000488317 HOMER1Q86YM7 354 aa6.83□□□□□ -1.32
SRRM1-215ENST00000488317 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.83□□□□□ -1.32
SRRM1-215ENST00000488317 ST13P5Q8NFI4 369 aaPredicted RBP6.83□□□□□ -1.32
SRRM1-215ENST00000488317 XAGE3Q8WTP9 111 aa6.83□□□□□ -1.32
SRRM1-215ENST00000488317 ISL2Q96A47 359 aa6.83□□□□□ -1.32
SRRM1-215ENST00000488317 KANSL2Q9H9L4 492 aa6.83□□□□□ -1.32
SRRM1-215ENST00000488317 FAM86C1Q9NVL1 165 aa6.83□□□□□ -1.32
SRRM1-215ENST00000488317 NOP53Q9NZM5 478 aaKnown RBP6.83□□□□□ -1.32
SRRM1-215ENST00000488317 USP21Q9UK80 565 aa6.83□□□□□ -1.32
SRRM1-215ENST00000488317 RGS13O14921 159 aa6.82□□□□□ -1.32
SRRM1-215ENST00000488317 NTF4P34130 210 aa6.82□□□□□ -1.32
SRRM1-215ENST00000488317 CCNFP41002 786 aa6.82□□□□□ -1.32
SRRM1-215ENST00000488317 USP11P51784 963 aa6.82□□□□□ -1.32
SRRM1-215ENST00000488317 GRIK4Q16099 956 aa6.82□□□□□ -1.32
SRRM1-215ENST00000488317 BBS9Q3SYG4 887 aa6.82□□□□□ -1.32
SRRM1-215ENST00000488317 PRAMEF13Q5VWM6 474 aa6.82□□□□□ -1.32
SRRM1-215ENST00000488317 MRM1Q6IN84 353 aaKnown RBP6.82□□□□□ -1.32
SRRM1-215ENST00000488317 SHISA2Q6UWI4 295 aa6.82□□□□□ -1.32
SRRM1-215ENST00000488317 PODNQ7Z5L7 613 aa6.82□□□□□ -1.32
SRRM1-215ENST00000488317 SMYD4Q8IYR2 804 aaPredicted RBP6.82□□□□□ -1.32
SRRM1-215ENST00000488317 BAHD1Q8TBE0 780 aaPredicted RBP6.82□□□□□ -1.32
SRRM1-215ENST00000488317 THAP3Q8WTV1 239 aaPredicted RBP6.82□□□□□ -1.32
SRRM1-215ENST00000488317 ZNF775Q96BV0 537 aaPredicted RBP6.82□□□□□ -1.32
SRRM1-215ENST00000488317 SLC6A18Q96N87 628 aa6.82□□□□□ -1.32
SRRM1-215ENST00000488317 SLKQ9H2G2 1235 aaPredicted RBP6.82□□□□□ -1.32
SRRM1-215ENST00000488317 ZNF214Q9UL59 606 aaPredicted RBP6.82□□□□□ -1.32
SRRM1-215ENST00000488317 ACTL7BQ9Y614 415 aa6.82□□□□□ -1.32
SRRM1-215ENST00000488317 F8W735 103 aaPredicted RBP6.81□□□□□ -1.32
SRRM1-215ENST00000488317 GAS2O43903 313 aaKnown RBP6.81□□□□□ -1.32
SRRM1-215ENST00000488317 DIAPH1O60610 1272 aaKnown RBP6.81□□□□□ -1.32
SRRM1-215ENST00000488317 CLEC3AO75596 197 aa6.81□□□□□ -1.32
SRRM1-215ENST00000488317 ARHGEF15O94989 841 aa6.81□□□□□ -1.32
SRRM1-215ENST00000488317 ALX3O95076 343 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms