RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 SLC34A2O95436 690 aa15.1■□□□□ 0.01
SREBF1-215ENST00000487401 CCL5P13501 91 aa15.1■□□□□ 0.01
SREBF1-215ENST00000487401 JAG1P78504 1218 aa15.1■□□□□ 0.01
SREBF1-215ENST00000487401 PDE3AQ14432 1141 aa15.1■□□□□ 0.01
SREBF1-215ENST00000487401 RNF208Q9H0X6 261 aa15.1■□□□□ 0.01
SREBF1-215ENST00000487401 SERPINB13Q9UIV8 391 aa15.1■□□□□ 0.01
SREBF1-215ENST00000487401 MYH13Q9UKX3 1938 aa15.09■□□□□ 0.01
SREBF1-215ENST00000487401 GH2P01242 217 aa15.09■□□□□ 0.01
SREBF1-215ENST00000487401 POLR3DP05423 398 aaPredicted RBP15.09■□□□□ 0.01
SREBF1-215ENST00000487401 PDE6AP16499 860 aa15.09■□□□□ 0.01
SREBF1-215ENST00000487401 SHROOM1Q2M3G4 852 aaPredicted RBP15.09■□□□□ 0.01
SREBF1-215ENST00000487401 GCC1Q96CN9 775 aa15.09■□□□□ 0.01
SREBF1-215ENST00000487401 RIOK1Q9BRS2 568 aaKnown RBP15.09■□□□□ 0.01
SREBF1-215ENST00000487401 CRNKL1Q9BZJ0 848 aaKnown RBP15.09■□□□□ 0.01
SREBF1-215ENST00000487401 MYH2Q9UKX2 1941 aa15.08■□□□□ 0
SREBF1-215ENST00000487401 GJB1P08034 283 aa15.08■□□□□ 0
SREBF1-215ENST00000487401 HOXA7P31268 230 aaPredicted RBP15.08■□□□□ 0
SREBF1-215ENST00000487401 IRF5Q13568 498 aa15.08■□□□□ 0
SREBF1-215ENST00000487401 CERKLQ49MI3 558 aaPredicted RBP15.08■□□□□ 0
SREBF1-215ENST00000487401 C20orf194Q5TEA3 1177 aa15.08■□□□□ 0
SREBF1-215ENST00000487401 TATDN1Q6P1N9 297 aa15.08■□□□□ 0
SREBF1-215ENST00000487401 USP17L2Q6R6M4 530 aa15.08■□□□□ 0
SREBF1-215ENST00000487401 PXYLP1Q8TE99 480 aa15.08■□□□□ 0
SREBF1-215ENST00000487401 P2RX7Q99572 595 aaKnown RBP15.08■□□□□ 0
SREBF1-215ENST00000487401 EHD4Q9H223 541 aa15.08■□□□□ 0
SREBF1-215ENST00000487401 BOLA2Q9H3K6 86 aa15.08■□□□□ 0
SREBF1-215ENST00000487401 CABP5Q9NP86 173 aa15.08■□□□□ 0
SREBF1-215ENST00000487401 ZNF532Q9HCE3 1301 aa15.08■□□□□ 0
SREBF1-215ENST00000487401 ELNP15502 786 aa15.07■□□□□ 0
SREBF1-215ENST00000487401 GJA8P48165 433 aa15.07■□□□□ 0
SREBF1-215ENST00000487401 RAB3GAP1Q15042 981 aa15.07■□□□□ 0
SREBF1-215ENST00000487401 ABCB5Q2M3G0 1257 aa15.07■□□□□ 0
SREBF1-215ENST00000487401 FEZ1Q99689 392 aa15.07■□□□□ 0
SREBF1-215ENST00000487401 PAG1Q9NWQ8 432 aa15.07■□□□□ 0
SREBF1-215ENST00000487401 MCM9Q9NXL9 1143 aa15.07■□□□□ 0
SREBF1-215ENST00000487401 INHAP05111 366 aa15.06■□□□□ 0
SREBF1-215ENST00000487401 ATP5JP18859 108 aa15.06■□□□□ 0
SREBF1-215ENST00000487401 PLCD1P51178 756 aa15.06■□□□□ 0
SREBF1-215ENST00000487401 HERVK_113P62684 666 aa15.06■□□□□ 0
SREBF1-215ENST00000487401 CCAR1Q8IX12 1150 aaKnown RBP15.06■□□□□ 0
SREBF1-215ENST00000487401 GPRC5AQ8NFJ5 357 aa15.06■□□□□ 0
SREBF1-215ENST00000487401 GTF3C2Q8WUA4 911 aaPredicted RBP15.06■□□□□ 0
SREBF1-215ENST00000487401 LRRCC1Q9C099 1032 aa15.06■□□□□ 0
SREBF1-215ENST00000487401 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.06■□□□□ 09e-12■■■□□ 17.5
SREBF1-215ENST00000487401 UNC93B1Q9H1C4 597 aa15.06■□□□□ 0
SREBF1-215ENST00000487401 EMILIN3Q9NT22 766 aa15.06■□□□□ 0
SREBF1-215ENST00000487401 MORF4L1Q9UBU8 362 aa15.06■□□□□ 0
SREBF1-215ENST00000487401 USP14P54578 494 aa15.05■□□□□ -0
SREBF1-215ENST00000487401 U2AF1L4Q8WU68 220 aaKnown RBP15.05■□□□□ -0
SREBF1-215ENST00000487401 SHISA4Q96DD7 197 aa15.05■□□□□ -0
SREBF1-215ENST00000487401 EDC3Q96F86 508 aaKnown RBP15.05■□□□□ -0
SREBF1-215ENST00000487401 AK9Q5TCS8 1911 aa15.05■□□□□ -0
SREBF1-215ENST00000487401 CENPFP49454 3210 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 TCRBV5S4A2TA0A5A2 114 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 USP17L15C9J2P7 530 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 USP17L13C9JLJ4 530 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 USP17L11C9JVI0 530 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 USP17L18D6R9N7 530 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 USP17L22D6RA61 530 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 USP17L17D6RBQ6 530 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 USP17L19D6RCP7 530 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 USP17L20D6RJB6 530 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 TFRCP02786 760 aaKnown RBP15.04■□□□□ -0
SREBF1-215ENST00000487401 SHMT1P34896 483 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 USP17L24Q0WX57 530 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 ZYXQ15942 572 aaKnown RBP15.04■□□□□ -0
SREBF1-215ENST00000487401 LCORLQ8N3X6 602 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 DPF3Q92784 378 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 HAUS7Q99871 368 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 ARMT1Q9H993 441 aa15.04■□□□□ -0
SREBF1-215ENST00000487401 DOCK2Q92608 1830 aa15.03■□□□□ -0
SREBF1-215ENST00000487401 MPHOSPH10O00566 681 aaKnown RBP15.03■□□□□ -0
SREBF1-215ENST00000487401 SMARCA5O60264 1052 aaPredicted RBP15.03■□□□□ -0
SREBF1-215ENST00000487401 SGPL1O95470 568 aa15.03■□□□□ -0
SREBF1-215ENST00000487401 CAPN2P17655 700 aa15.03■□□□□ -0
SREBF1-215ENST00000487401 ADD2P35612 726 aa15.03■□□□□ -0
SREBF1-215ENST00000487401 ZSCAN25Q6NSZ9 544 aa15.03■□□□□ -0
SREBF1-215ENST00000487401 SDR42E1Q8WUS8 393 aa15.03■□□□□ -0
SREBF1-215ENST00000487401 C12orf42Q96LP6 360 aa15.03■□□□□ -0
SREBF1-215ENST00000487401 DEFB118Q96PH6 123 aa15.03■□□□□ -0
SREBF1-215ENST00000487401 PAGR1Q9BTK6 254 aa15.03■□□□□ -0
SREBF1-215ENST00000487401 CWC22Q9HCG8 908 aaKnown RBP15.03■□□□□ -0
SREBF1-215ENST00000487401 DCP1AQ9NPI6 582 aaPredicted RBP15.03■□□□□ -0
SREBF1-215ENST00000487401 RBPJLQ9UBG7 517 aa15.03■□□□□ -0
SREBF1-215ENST00000487401 GJD2Q9UKL4 321 aa15.03■□□□□ -0
SREBF1-215ENST00000487401 MBD4O95243 580 aa15.02■□□□□ -0
SREBF1-215ENST00000487401 MAPK4P31152 587 aa15.02■□□□□ -0
SREBF1-215ENST00000487401 GABPAQ06546 454 aa15.02■□□□□ -0
SREBF1-215ENST00000487401 AMOTL1Q8IY63 956 aa15.02■□□□□ -0
SREBF1-215ENST00000487401 ACER1Q8TDN7 264 aa15.02■□□□□ -0
SREBF1-215ENST00000487401 DDRGK1Q96HY6 314 aa15.02■□□□□ -0
SREBF1-215ENST00000487401 NUDT12Q9BQG2 462 aa15.02■□□□□ -0
SREBF1-215ENST00000487401 HTATIP2Q9BUP3 242 aa15.02■□□□□ -0
SREBF1-215ENST00000487401 KIAA1683Q9H0B3 1180 aa15.02■□□□□ -0
SREBF1-215ENST00000487401 TXNRD2Q9NNW7 524 aa15.02■□□□□ -0
SREBF1-215ENST00000487401 ATP8A2Q9NTI2 1148 aa15.02■□□□□ -0
SREBF1-215ENST00000487401 PEX10O60683 326 aa15.01□□□□□ -0.01
SREBF1-215ENST00000487401 FARP2O94887 1054 aaPredicted RBP15.01□□□□□ -0.01
SREBF1-215ENST00000487401 HMGCRP04035 888 aa15.01□□□□□ -0.01
SREBF1-215ENST00000487401 CYP2D6P10635 497 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms