RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 LARP1BQ659C4 914 aaKnown RBP6.6□□□□□ -1.35
SF1-217ENST00000486960 TMC7Q7Z402 723 aa6.6□□□□□ -1.35
SF1-217ENST00000486960 KIAA0907Q7Z7F0 614 aaPredicted RBP6.6□□□□□ -1.35
SF1-217ENST00000486960 NUTM1Q86Y26 1132 aa6.6□□□□□ -1.35
SF1-217ENST00000486960 SUGP1Q8IWZ8 645 aaKnown RBP6.6□□□□□ -1.35
SF1-217ENST00000486960 LMNTD2Q8IXW0 634 aa6.6□□□□□ -1.35
SF1-217ENST00000486960 CPXCR1Q8N123 301 aa6.6□□□□□ -1.35
SF1-217ENST00000486960 SH3TC2Q8TF17 1288 aa6.6□□□□□ -1.35
SF1-217ENST00000486960 ZNF594Q96JF6 807 aaPredicted RBP6.6□□□□□ -1.35
SF1-217ENST00000486960 SEZ6LQ9BYH1 1024 aa6.6□□□□□ -1.35
SF1-217ENST00000486960 HACL1Q9UJ83 578 aa6.6□□□□□ -1.35
SF1-217ENST00000486960 GTF2A1LQ9UNN4 478 aa6.6□□□□□ -1.35
SF1-217ENST00000486960 TRIM6-TRIM34B2RNG4 842 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 PRRT4C9JH25 899 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 ATP5J2-PTCD1G3V325 749 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 SMAPO00193 183 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 RPN1P04843 607 aaKnown RBP6.59□□□□□ -1.35
SF1-217ENST00000486960 ANP32AP39687 249 aaKnown RBP6.59□□□□□ -1.35
SF1-217ENST00000486960 TDO2P48775 406 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 GEMIN4P57678 1058 aaKnown RBP6.59□□□□□ -1.35
SF1-217ENST00000486960 RACK1P63244 317 aaKnown RBP6.59□□□□□ -1.35
SF1-217ENST00000486960 TMF1P82094 1093 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 ITPK1Q13572 414 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 TTF1Q15361 905 aaPredicted RBP6.59□□□□□ -1.35
SF1-217ENST00000486960 SLC4A8Q2Y0W8 1093 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 FAM133BQ5BKY9 247 aaKnown RBP6.59□□□□□ -1.35
SF1-217ENST00000486960 SLC4A10Q6U841 1118 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.59□□□□□ -1.35
SF1-217ENST00000486960 MYO1HQ8N1T3 1032 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 SLAIN1Q8ND83 568 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 GTF3C2Q8WUA4 911 aaPredicted RBP6.59□□□□□ -1.35
SF1-217ENST00000486960 ZNF296Q8WUU4 475 aaPredicted RBP6.59□□□□□ -1.35
SF1-217ENST00000486960 NUDT16Q96DE0 195 aaKnown RBP6.59□□□□□ -1.35
SF1-217ENST00000486960 HHIPL1Q96JK4 782 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 SELENOOQ9BVL4 669 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 RBCK1Q9BYM8 510 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 TRIM55Q9BYV6 548 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 PRKD2Q9BZL6 878 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 CXorf56Q9H5V9 222 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 CDV3Q9UKY7 258 aaKnown RBP6.59□□□□□ -1.35
SF1-217ENST00000486960 PCDHGB7Q9Y5F8 929 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 ADGRB1O14514 1584 aa6.59□□□□□ -1.35
SF1-217ENST00000486960 EIF3AQ14152 1382 aaKnown RBP6.58□□□□□ -1.36
SF1-217ENST00000486960 ANKRD11Q6UB99 2663 aaPredicted RBP6.58□□□□□ -1.36
SF1-217ENST00000486960 A0A1W2PRQ8 180 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 MOXD2PA6NHM9 499 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 TNFRSF10AO00220 468 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 PIK3CDO00329 1044 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 TREHO43280 583 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 FIBPO43427 364 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 TGFB3P10600 412 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 TNNT2P45379 298 aaPredicted RBP6.58□□□□□ -1.36
SF1-217ENST00000486960 MAPK8P45983 427 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 KIF23Q02241 960 aaPredicted RBP6.58□□□□□ -1.36
SF1-217ENST00000486960 NOGQ13253 232 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 TAF11Q15544 211 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 AKAP4Q5JQC9 854 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 ANKRD13DQ6ZTN6 518 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 KRT26Q7Z3Y9 468 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 C14orf80Q86SX3 495 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 LCA5Q86VQ0 697 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 PPHLN1Q8NEY8 458 aaKnown RBP6.58□□□□□ -1.36
SF1-217ENST00000486960 GUCD1Q96NT3 240 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 MPHOSPH9Q99550 1183 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 PTPRHQ9HD43 1115 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 SNTG2Q9NY99 539 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 CNTN3Q9P232 1028 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 ATP8A1Q9Y2Q0 1164 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 PCDHB15Q9Y5E8 787 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 EMILIN1Q9Y6C2 1016 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 PARP3Q9Y6F1 533 aa6.58□□□□□ -1.36
SF1-217ENST00000486960 ALG1L2C9J202 215 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 ORC4O43929 436 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 CELF2O95319 508 aaKnown RBP6.57□□□□□ -1.36
SF1-217ENST00000486960 IFIT2P09913 472 aaKnown RBP6.57□□□□□ -1.36
SF1-217ENST00000486960 CNGA1P29973 690 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 CLK1P49759 484 aaKnown RBP6.57□□□□□ -1.36
SF1-217ENST00000486960 CDKN1CP49918 316 aaPredicted RBP6.57□□□□□ -1.36
SF1-217ENST00000486960 ATP2B2Q01814 1243 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 PLCB3Q01970 1234 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 CTDSPL2Q05D32 466 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 DPYDQ12882 1025 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 NBPF10Q6P3W6 841 aaKnown RBP6.57□□□□□ -1.36
SF1-217ENST00000486960 PDXDC1Q6P996 788 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 LRP10Q7Z4F1 713 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 UBE2Q1Q7Z7E8 422 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 RELL1Q8IUW5 271 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 MICALL2Q8IY33 904 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 NDUFAF2Q8N183 169 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 DEPDC4Q8N2C3 294 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 ZNF513Q8N8E2 541 aaPredicted RBP6.57□□□□□ -1.36
SF1-217ENST00000486960 KIAA1958Q8N8K9 716 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 CDHR1Q96JP9 859 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 DEPDC7Q96QD5 511 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 DNAJC25Q9H1X3 360 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 NEUROD4Q9HD90 331 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 CXXC1Q9P0U4 656 aaPredicted RBP6.57□□□□□ -1.36
SF1-217ENST00000486960 COL4A5P29400 1685 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 CARMIL3Q8ND23 1372 aa6.57□□□□□ -1.36
SF1-217ENST00000486960 ESYT3A0FGR9 886 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms