RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 RNF41Q9H4P4 317 aaPredicted RBP13.52□□□□□ -0.25
NUP50-216ENST00000486184 DNAJC18Q9H819 358 aa13.52□□□□□ -0.25
NUP50-216ENST00000486184 ELP3Q9H9T3 547 aa13.52□□□□□ -0.25
NUP50-216ENST00000486184 ZNF112Q9UJU3 913 aa13.52□□□□□ -0.25
NUP50-216ENST00000486184 MYH4Q9Y623 1939 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 PHIPQ8WWQ0 1821 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 PHF20L1A8MW92 1017 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 GDF11O95390 407 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 SHMT1P34896 483 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 CAP2P40123 477 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 EVX2Q03828 476 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 GABPAQ06546 454 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 ABCB5Q2M3G0 1257 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 NOL9Q5SY16 702 aaKnown RBP13.51□□□□□ -0.25
NUP50-216ENST00000486184 LDLRAD1Q5T700 205 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 RNF20Q5VTR2 975 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 TATDN1Q6P1N9 297 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 MFSD6Q6ZSS7 791 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.51□□□□□ -0.25
NUP50-216ENST00000486184 ZNF444Q8N0Y2 327 aaPredicted RBP13.51□□□□□ -0.25
NUP50-216ENST00000486184 SLC44A5Q8NCS7 719 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 MAP4K1Q92918 833 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 LSG1Q9H089 658 aaKnown RBP13.51□□□□□ -0.25
NUP50-216ENST00000486184 ANAPC4Q9UJX5 808 aa13.51□□□□□ -0.25
NUP50-216ENST00000486184 RBM8AQ9Y5S9 174 aaKnown RBP13.51□□□□□ -0.25
NUP50-216ENST00000486184 ASNSP08243 561 aa13.5□□□□□ -0.25
NUP50-216ENST00000486184 ECE1P42892 770 aa13.5□□□□□ -0.25
NUP50-216ENST00000486184 RRP12Q5JTH9 1297 aaKnown RBP13.5□□□□□ -0.25
NUP50-216ENST00000486184 CCDC102AQ96A19 550 aa13.5□□□□□ -0.25
NUP50-216ENST00000486184 CLMNQ96JQ2 1002 aa13.5□□□□□ -0.25
NUP50-216ENST00000486184 CCDC17Q96LX7 622 aa13.5□□□□□ -0.25
NUP50-216ENST00000486184 GINM1Q9NU53 330 aa13.5□□□□□ -0.25
NUP50-216ENST00000486184 SNCAIPQ9Y6H5 919 aa13.5□□□□□ -0.25
NUP50-216ENST00000486184 PTPRFP10586 1907 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 GREB1LQ9C091 1923 aaPredicted RBP13.49□□□□□ -0.25
NUP50-216ENST00000486184 RASSF10A6NK89 507 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 PRDM1O75626 825 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 TSPY3P0CV98 308 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 TSPY8P0CW00 308 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 PCP11498 1178 aaKnown RBP13.49□□□□□ -0.25
NUP50-216ENST00000486184 MCCP23508 829 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 HTRA3P83110 453 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 TRDNQ13061 729 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 RAB3GAP1Q15042 981 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 AKNAD1Q5T1N1 836 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 ERO1BQ86YB8 467 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 OPTNQ96CV9 577 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 OTUD5Q96G74 571 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 AS3MTQ9HBK9 375 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 ZBTB21Q9ULJ3 1066 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
NUP50-216ENST00000486184 SPDYE5A6NIY4 337 aa13.48□□□□□ -0.25
NUP50-216ENST00000486184 TSPY2A6NKD2 308 aa13.48□□□□□ -0.25
NUP50-216ENST00000486184 USP17L5A8MUK1 530 aa13.48□□□□□ -0.25
NUP50-216ENST00000486184 SMIM22K7EJ46 135 aa13.48□□□□□ -0.25
NUP50-216ENST00000486184 RANBP6O60518 1105 aaKnown RBP13.48□□□□□ -0.25
NUP50-216ENST00000486184 GH2P01242 217 aa13.48□□□□□ -0.25
NUP50-216ENST00000486184 ZKSCAN1P17029 563 aaPredicted RBP13.48□□□□□ -0.25
NUP50-216ENST00000486184 PPATQ06203 517 aa13.48□□□□□ -0.25
NUP50-216ENST00000486184 CYP4F22Q6NT55 531 aa13.48□□□□□ -0.25
NUP50-216ENST00000486184 TMEM179Q6ZVK1 233 aa13.48□□□□□ -0.25
NUP50-216ENST00000486184 STAG1Q8WVM7 1258 aa13.48□□□□□ -0.25
NUP50-216ENST00000486184 WNK4Q96J92 1243 aa13.48□□□□□ -0.25
NUP50-216ENST00000486184 TBC1D2Q9BYX2 928 aa13.48□□□□□ -0.25
NUP50-216ENST00000486184 KRT23Q9C075 422 aa13.48□□□□□ -0.25
NUP50-216ENST00000486184 CNNM2Q9H8M5 875 aa13.48□□□□□ -0.25
NUP50-216ENST00000486184 EPB41L2O43491 1005 aaKnown RBP13.47□□□□□ -0.25
NUP50-216ENST00000486184 ORC4O43929 436 aa13.47□□□□□ -0.25
NUP50-216ENST00000486184 CYP21A2P08686 494 aa13.47□□□□□ -0.25
NUP50-216ENST00000486184 SLC10A3P09131 477 aa13.47□□□□□ -0.25
NUP50-216ENST00000486184 ZBTB48P10074 688 aaPredicted RBP13.47□□□□□ -0.25
NUP50-216ENST00000486184 AKR1B1P15121 316 aa13.47□□□□□ -0.25
NUP50-216ENST00000486184 PTPRAP18433 802 aa13.47□□□□□ -0.25
NUP50-216ENST00000486184 RASA1P20936 1047 aa13.47□□□□□ -0.25
NUP50-216ENST00000486184 NT5C2P49902 561 aa13.47□□□□□ -0.25
NUP50-216ENST00000486184 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
NUP50-216ENST00000486184 RALYLQ86SE5 291 aaKnown RBP13.47□□□□□ -0.25
NUP50-216ENST00000486184 RASAL3Q86YV0 1011 aa13.47□□□□□ -0.25
NUP50-216ENST00000486184 TBC1D10CQ8IV04 446 aa13.47□□□□□ -0.25
NUP50-216ENST00000486184 ESR2Q92731 530 aa13.47□□□□□ -0.25
NUP50-216ENST00000486184 CAPNS2Q96L46 248 aa13.47□□□□□ -0.25
NUP50-216ENST00000486184 ZHX2Q9Y6X8 837 aa13.47□□□□□ -0.25
NUP50-216ENST00000486184 SLC27A2O14975 620 aa13.46□□□□□ -0.25
NUP50-216ENST00000486184 TFAP4Q01664 338 aa13.46□□□□□ -0.25
NUP50-216ENST00000486184 PPIL2Q13356 520 aa13.46□□□□□ -0.25
NUP50-216ENST00000486184 RRP1BQ14684 758 aaKnown RBP13.46□□□□□ -0.25
NUP50-216ENST00000486184 PPP4R3BQ5MIZ7 849 aa13.46□□□□□ -0.25
NUP50-216ENST00000486184 SPRYD7Q5W111 196 aa13.46□□□□□ -0.25
NUP50-216ENST00000486184 CREB3L3Q68CJ9 461 aa13.46□□□□□ -0.25
NUP50-216ENST00000486184 FEZ1Q99689 392 aa13.46□□□□□ -0.25
NUP50-216ENST00000486184 ARHGEF10LQ9HCE6 1279 aa13.46□□□□□ -0.25
NUP50-216ENST00000486184 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.46□□□□□ -0.25
NUP50-216ENST00000486184 NEDD4P46934 1319 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 WDR33Q9C0J8 1336 aaKnown RBP13.45□□□□□ -0.26
NUP50-216ENST00000486184 TRIM75PA6NK02 468 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 ATP2B2Q01814 1243 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 ICA1Q05084 483 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 NOGQ13253 232 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 SEPT2Q15019 361 aa13.45□□□□□ -0.26
NUP50-216ENST00000486184 NECTIN1Q15223 517 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms