RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 FAM174AQ8TBP5 190 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 SMCR8Q8TEV9 937 aaPredicted RBP4.07□□□□□ -1.76
FXN-204ENST00000484259 HNRNPLLQ8WVV9 542 aaKnown RBP4.07□□□□□ -1.76
FXN-204ENST00000484259 GJA10Q969M2 543 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 SH3KBP1Q96B97 665 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 MFSD3Q96ES6 412 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 TNIP3Q96KP6 325 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 PPM1MQ96MI6 270 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 FAM129BQ96TA1 746 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 NELL2Q99435 816 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 SPSB2Q99619 263 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 CDHR5Q9HBB8 845 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 NLRC4Q9NPP4 1024 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 HELLSQ9NRZ9 838 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 HOXC10Q9NYD6 342 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 CGNQ9P2M7 1197 aaKnown RBP4.07□□□□□ -1.76
FXN-204ENST00000484259 PRKAG3Q9UGI9 489 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 ZNF180Q9UJW8 692 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 RRP15Q9Y3B9 282 aaKnown RBP4.07□□□□□ -1.76
FXN-204ENST00000484259 SPEF1Q9Y4P9 236 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 ADGRG1Q9Y653 693 aa4.07□□□□□ -1.76
FXN-204ENST00000484259 PIK3R4Q99570 1358 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 TRIM64A6NGJ6 449 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 TRIM64BA6NI03 449 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 SFI1A8K8P3 1242 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 ZBBXA8MT70 800 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 H0Y3Z8 333 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 TOR1BO14657 336 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 ADAM23O75077 832 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 SKAP2O75563 359 aaPredicted RBP4.06□□□□□ -1.76
FXN-204ENST00000484259 AGR2O95994 175 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 CFHP08603 1231 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 HSD3B1P14060 373 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 GLULP15104 373 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 EIF4BP23588 611 aaKnown RBP4.06□□□□□ -1.76
FXN-204ENST00000484259 SERPINB3P29508 390 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 ABCD1P33897 745 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 GTF2A2P52657 109 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 GJA9P57773 515 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 BPIFB3P59826 476 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 COX10Q12887 443 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 COL9A2Q14055 689 aaPredicted RBP4.06□□□□□ -1.76
FXN-204ENST00000484259 NR6A1Q15406 480 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 COBLL1Q53SF7 1204 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 AKAP4Q5JQC9 854 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 CTR9Q6PD62 1173 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 ABRAXAS1Q6UWZ7 409 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 CATSPER4Q7RTX7 472 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 NECAB2Q7Z6G3 386 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 ZBTB46Q86UZ6 589 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 JMYQ8N9B5 988 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 OR8H1Q8NGG4 311 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 CPLX3Q8WVH0 158 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 MAML1Q92585 1016 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 NINJ1Q92982 152 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 TRIM63Q969Q1 353 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 CHMP4CQ96CF2 233 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 HOOK2Q96ED9 719 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 BORCS6Q96GS4 357 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 HIC2Q96JB3 615 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 MKNK1Q9BUB5 465 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 OSBPL5Q9H0X9 879 aaPredicted RBP4.06□□□□□ -1.76
FXN-204ENST00000484259 CYP4F11Q9HBI6 524 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 CHCHD3Q9NX63 227 aaKnown RBP4.06□□□□□ -1.76
FXN-204ENST00000484259 NKIRAS2Q9NYR9 191 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 STIM2Q9P246 746 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 PCSK1NQ9UHG2 260 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 PA2G4Q9UQ80 394 aaKnown RBP4.06□□□□□ -1.76
FXN-204ENST00000484259 CD2APQ9Y5K6 639 aa4.06□□□□□ -1.76
FXN-204ENST00000484259 MAGED1Q9Y5V3 778 aaPredicted RBP4.06□□□□□ -1.76
FXN-204ENST00000484259 PNMA6FA0A0J9YX94 578 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 VSTM5A8MXK1 200 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 COBLO75128 1261 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 KATNA1O75449 491 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 DKK1O94907 266 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 IPO7O95373 1038 aaKnown RBP4.05□□□□□ -1.76
FXN-204ENST00000484259 IGHA2P01877 340 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 VSIG8P0DPA2 414 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 ZSCAN20P17040 1043 aaPredicted RBP4.05□□□□□ -1.76
FXN-204ENST00000484259 DESP17661 470 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 RPS6KB1P23443 525 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 PRPHP41219 470 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 RAD52P43351 418 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 STT3AP46977 705 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 PLA2G4AP47712 749 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 PAPOLAP51003 745 aaKnown RBP4.05□□□□□ -1.76
FXN-204ENST00000484259 UBASH3AP57075 661 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 ITKQ08881 620 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 MTMR2Q13614 643 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 PSMD6Q15008 389 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 PLCB4Q15147 1175 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 SF3B3Q15393 1217 aaKnown RBP4.05□□□□□ -1.76
FXN-204ENST00000484259 TAF1CQ15572 869 aaPredicted RBP4.05□□□□□ -1.76
FXN-204ENST00000484259 MUM1Q2TAK8 710 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 MINDY4Q4G0A6 757 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 TNNI3KQ59H18 835 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 PERM1Q5SV97 790 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 INTS11Q5TA45 600 aaKnown RBP4.05□□□□□ -1.76
FXN-204ENST00000484259 LCE3BQ5TA77 95 aa4.05□□□□□ -1.76
FXN-204ENST00000484259 MFSD4BQ5TF39 518 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms